RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 FCAMRQ8WWV6 532 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 METTL21AQ8WXB1 218 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 MAFIPQ8WZ33 124 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZNF285Q96NJ3 590 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 BEX2Q9BXY8 128 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 BEX1Q9HBH7 125 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 ARMC1Q9NVT9 282 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 ABCD2Q9UBJ2 740 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 PCNTO95613 3336 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 VWA8A3KMH1 1905 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 EDDM13A0A1B0GTR0 161 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 SOCS2O14508 198 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 IVDP26440 423 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 AVPR2P30518 371 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 HTR2BP41595 481 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 WASP42768 502 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 PIGFQ07326 219 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 SLC13A2Q13183 592 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 MAD2L1BPQ15013 274 aaPredicted RBP11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 AGTRAPQ6RW13 159 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 PRSS48Q7RTY5 328 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 TSPYL5Q86VY4 417 aaPredicted RBP11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 FAM129CQ86XR2 697 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 TIGD4Q8IY51 512 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZNF101Q8IZC7 436 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 JAGN1Q8N5M9 183 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 TMEM145Q8NBT3 493 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 GNPDA2Q8TDQ7 276 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 RPL10LQ96L21 214 aaKnown RBP11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 YIPF4Q9BSR8 244 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 HTR3EA5X5Y0 456 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 PET100P0DJ07 73 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 DPP6P42658 865 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 PMS2P3Q13401 168 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 LIPKQ5VXJ0 399 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 UGT2A3Q6UWM9 527 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 HSDL2Q6YN16 418 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 Q6ZNB5 142 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 SLC22A15Q8IZD6 547 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 EPYCQ99645 322 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 TMEM168Q9H0V1 697 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 C13orf42A0A1B0GVH6 325 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZNF208O43345 1280 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 RPP14O95059 124 aaKnown RBP11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 DCNP07585 359 aaKnown RBP11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 HTR1AP08908 422 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 TAS2R50P59544 299 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 DPY19L2P1Q6NXN4 242 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 TMIGD1Q6UXZ0 262 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 GALNT7Q86SF2 657 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 HMGB4Q8WW32 186 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 SGCDQ92629 289 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 GAL3ST4Q96RP7 486 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 CCM2Q9BSQ5 444 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 POTEKPQ9BYX7 375 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 TP63Q9H3D4 680 aaPredicted RBP11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 SRMSQ9H3Y6 488 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 SMIM30A4D0T7 59 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 PSMD9O00233 223 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZNF217O75362 1048 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 RBBP9O75884 186 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 APOC3P02656 99 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 SLC35E2BP0CK96 405 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 ATP1B2P14415 290 aaPredicted RBP11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 CSKP41240 450 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 FNTBP49356 437 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 AIMP2Q13155 320 aaKnown RBP11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 OLIG2Q13516 323 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 GRB7Q14451 532 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 EIF2S3LQ2VIR3 472 aaKnown RBP11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 BRAT1Q6PJG6 821 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 GDPD1Q8N9F7 314 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 RSPRY1Q96DX4 576 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 PRR11Q96HE9 360 aaPredicted RBP11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 HIST1H2AAQ96QV6 131 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 PIP5K1AQ99755 562 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 PRRG4Q9BZD6 226 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 MTG2Q9H4K7 406 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 COPS7AQ9UBW8 275 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 ARPC4-TTLL3A0A0A6YYG9 625 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 ERI3O43414 337 aaKnown RBP11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 NUAK1O60285 661 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 OR7A10O76100 309 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 H2AFB2P0C5Z0 115 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 NDUFS1P28331 727 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 AGTR1P30556 359 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 MASP1P48740 699 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 BMXP51813 675 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 S100A10P60903 97 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 RAB5BP61020 215 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 SNTB2Q13425 540 aaKnown RBP11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 OCLNQ16625 522 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 SPRED3Q2MJR0 410 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 KANK2Q63ZY3 851 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZNF776Q68DI1 518 aaPredicted RBP11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 NAPRTQ6XQN6 538 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZFAND4Q86XD8 727 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 HDDC3Q8N4P3 179 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 DCAF4L2Q8NA75 395 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZNF527Q8NB42 609 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms