RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 KIAA0907Q7Z7F0 614 aaPredicted RBP9.85□□□□□ -0.83
SKA1-201ENST00000285116 AQP11Q8NBQ7 271 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 PROKR2Q8NFJ6 384 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 KLHL6Q8WZ60 621 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 TMEM159Q96B96 161 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 AP2M1Q96CW1 435 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 MED18Q9BUE0 208 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 MND1Q9BWT6 205 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 ABCG8Q9H221 673 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 NMNAT1Q9HAN9 279 aaPredicted RBP9.85□□□□□ -0.83
SKA1-201ENST00000285116 ISYNA1Q9NPH2 558 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 PAK6Q9NQU5 681 aaPredicted RBP9.85□□□□□ -0.83
SKA1-201ENST00000285116 RBFOX1Q9NWB1 397 aaKnown RBP9.85□□□□□ -0.83
SKA1-201ENST00000285116 CXXC1Q9P0U4 656 aaPredicted RBP9.85□□□□□ -0.83
SKA1-201ENST00000285116 CFAP97Q9P2B7 532 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 SLC23A1Q9UHI7 598 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 FAAHO00519 579 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 MYL12BO14950 172 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 OR7A10O76100 309 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 CDRT1O95170 752 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 SLC16A8O95907 504 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 C1GALT1C1LP0DN25 315 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 MYL12AP19105 171 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 HLA-FP30511 346 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 IRS1P35568 1242 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 GSTM5P46439 218 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 STK19P49842 368 aaPredicted RBP9.85□□□□□ -0.83
SKA1-201ENST00000285116 RRAS2P62070 204 aaPredicted RBP9.85□□□□□ -0.83
SKA1-201ENST00000285116 MRPL28Q13084 256 aaKnown RBP9.85□□□□□ -0.83
SKA1-201ENST00000285116 SYTL3Q4VX76 610 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 REEP3Q6NUK4 255 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 DPPA4Q7L190 304 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 TMC8Q8IU68 726 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 LRRC56Q8IYG6 542 aaPredicted RBP9.85□□□□□ -0.83
SKA1-201ENST00000285116 UBE2J2Q8N2K1 259 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 NANOGP1Q8N7R0 232 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 LSM14AQ8ND56 463 aaKnown RBP9.85□□□□□ -0.83
SKA1-201ENST00000285116 C19orf18Q8NEA5 215 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 NEIL2Q969S2 332 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 UBE2E3Q969T4 207 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 NEURL3Q96EH8 262 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 TMEM80Q96HE8 168 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 FOPNLQ96NB1 174 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 NECTIN4Q96NY8 510 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 AIFM2Q9BRQ8 373 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 ACAT2Q9BWD1 397 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 ZDHHC6Q9H6R6 413 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 RPL36Q9Y3U8 105 aaKnown RBP9.85□□□□□ -0.83
SKA1-201ENST00000285116 AUP1Q9Y679 476 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 TRBC2A0A5B9 178 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 UPK3BL1B0FP48 263 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 UPK3BL2E5RIL1 263 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 TSPAN9O75954 239 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 GASTP01350 101 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 HLA-DQB1P01920 261 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 CNR2P34972 360 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 TGM4P49221 684 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 DDX39BQ13838 428 aaKnown RBP9.84□□□□□ -0.83
SKA1-201ENST00000285116 SLC5A12Q1EHB4 618 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 ZNF648Q5T619 568 aaPredicted RBP9.84□□□□□ -0.83
SKA1-201ENST00000285116 ZBTB37Q5TC79 503 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 TRIQKQ629K1 86 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 SLC39A11Q8N1S5 342 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 SDR16C5Q8N3Y7 309 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 LINC00471Q8N535 108 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 OR52J3Q8NH60 311 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 CDC26Q8NHZ8 85 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 MRPS31Q92665 395 aaKnown RBP9.84□□□□□ -0.83
SKA1-201ENST00000285116 TRMT61AQ96FX7 289 aaKnown RBP9.84□□□□□ -0.83
SKA1-201ENST00000285116 SAMD11Q96NU1 681 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 DCLRE1CQ96SD1 692 aaKnown RBP9.84□□□□□ -0.83
SKA1-201ENST00000285116 C17orf62Q9BQA9 187 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 C12orf4Q9NQ89 552 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 MRPS18AQ9NVS2 196 aaKnown RBP9.84□□□□□ -0.83
SKA1-201ENST00000285116 SLC6A14Q9UN76 642 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 TLR4O00206 839 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 PLD2O14939 933 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 TPST2O60704 377 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 CSO75390 466 aaKnown RBP9.84□□□□□ -0.83
SKA1-201ENST00000285116 C1orf105O95561 183 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 OPN1SWP03999 348 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 PRKAR1AP10644 381 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 NPPBP16860 134 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 TNFRSF1BP20333 461 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 FRKP42685 505 aaPredicted RBP9.84□□□□□ -0.83
SKA1-201ENST00000285116 OR1E2P47887 323 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 SLC9A3P48764 834 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 CLDN20P56880 219 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 SMIM11AP58511 58 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 DSTNP60981 165 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 SF1Q15637 639 aaKnown RBP9.84□□□□□ -0.83
SKA1-201ENST00000285116 C7orf61Q8IZ16 206 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 RASGEF1AQ8N9B8 481 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 TOR1AIP2Q8NFQ8 470 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 OR4M2Q8NGB6 313 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 OR8H1Q8NGG4 311 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 OR8J1Q8NGP2 316 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 OR2A12Q8NGT7 310 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 SETD7Q8WTS6 366 aaKnown RBP9.84□□□□□ -0.83
SKA1-201ENST00000285116 GLYATL1Q969I3 302 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms