RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 TAMM41Q96BW9 452 aa10.34□□□□□ -0.75
GGPS1-201ENST00000282841 GTPBP2Q9BX10 602 aaKnown RBP10.34□□□□□ -0.75
GGPS1-201ENST00000282841 ADAM29Q9UKF5 820 aa10.34□□□□□ -0.75
GGPS1-201ENST00000282841 LRCH1Q9Y2L9 728 aa10.34□□□□□ -0.75
GGPS1-201ENST00000282841 PCDHGA2Q9Y5H1 932 aa10.34□□□□□ -0.75
GGPS1-201ENST00000282841 SNAP29O95721 258 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 BMP2P12643 396 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 NTSP30990 170 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 CSF2RBP32927 897 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 MLLT3P42568 568 aaPredicted RBP10.33□□□□□ -0.76
GGPS1-201ENST00000282841 DUSP7Q16829 419 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 TRMT12Q53H54 448 aaKnown RBP10.33□□□□□ -0.76
GGPS1-201ENST00000282841 DGAT2L6Q6ZPD8 337 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 PRSS58Q8IYP2 241 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 TNIP2Q8NFZ5 429 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 NT5CQ8TCD5 201 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.33□□□□□ -0.76
GGPS1-201ENST00000282841 CYGBQ8WWM9 190 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 PEX11GQ96HA9 241 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 FBXL20Q96IG2 436 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 PHOX2BQ99453 314 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 SPOCK3Q9BQ16 436 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 UGT2B28Q9BY64 529 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 OR51I1Q9H343 314 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 MUC13Q9H3R2 512 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 DHCR7Q9UBM7 475 aaKnown RBP10.33□□□□□ -0.76
GGPS1-201ENST00000282841 GMEB2Q9UKD1 530 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 ENTPD4Q9Y227 616 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 PRAMEF25A6NGN4 478 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 HMGN4O00479 90 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 DLGAP1O14490 977 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 GDF9O60383 454 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 MTRF1O75570 445 aaKnown RBP10.33□□□□□ -0.76
GGPS1-201ENST00000282841 DSTNP60981 165 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 ATP6AP1Q15904 470 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 INAQ16352 499 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 GUSBP11Q6P575 273 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 ZC3H14Q6PJT7 736 aaKnown RBP10.33□□□□□ -0.76
GGPS1-201ENST00000282841 RNF44Q7L0R7 432 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 ABHD13Q7L211 337 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 ZCCHC7Q8N3Z6 543 aaKnown RBP10.33□□□□□ -0.76
GGPS1-201ENST00000282841 SRFBP1Q8NEF9 429 aaKnown RBP10.33□□□□□ -0.76
GGPS1-201ENST00000282841 OR7G2Q8NG99 324 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 ZFPM2Q8WW38 1151 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 ZG16BQ96DA0 208 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 TMEM19Q96HH6 336 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 VCX3BQ9H321 246 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 EPS8L2Q9H6S3 715 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 ZNF780BQ9Y6R6 833 aa10.33□□□□□ -0.76
GGPS1-201ENST00000282841 SMIM10L1P0DMW3 83 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 TDGF1P13385 188 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 DRD2P14416 443 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 POLR2IP36954 125 aaKnown RBP10.32□□□□□ -0.76
GGPS1-201ENST00000282841 OR1D4P47884 311 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 MED21Q13503 144 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 SPATS1Q496A3 300 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 GALNT5Q7Z7M9 940 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 ZNF554Q86TJ5 538 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 RBM45Q8IUH3 476 aaKnown RBP10.32□□□□□ -0.76
GGPS1-201ENST00000282841 EID2Q8N6I1 236 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 ANKFN1Q8N957 763 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 LZICQ8WZA0 190 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 SMIM10Q96HG1 83 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 C10orf90Q96M02 699 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 ZNF681Q96N22 645 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 PRR14Q9BWN1 585 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 TWSG1Q9GZX9 223 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 GAREM1Q9H706 876 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 CTPS2Q9NRF8 586 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 NDOR1Q9UHB4 597 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 PILRBQ9UKJ0 227 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 IGHV1OR21-1A0A087WYE8 117 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 HRKO00198 91 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 SLC28A2O43868 658 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 RETP07949 1114 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 UMPSP11172 480 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 CSNK2A2P19784 350 aaPredicted RBP10.32□□□□□ -0.76
GGPS1-201ENST00000282841 BUD31P41223 144 aaPredicted RBP10.32□□□□□ -0.76
GGPS1-201ENST00000282841 RFX3P48380 749 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 ARRB1P49407 418 aaPredicted RBP10.32□□□□□ -0.76
GGPS1-201ENST00000282841 BTG2P78543 158 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 TNFRSF17Q02223 184 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 TGM3Q08188 693 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 GANABQ14697 944 aaKnown RBP10.32□□□□□ -0.76
GGPS1-201ENST00000282841 EXOSC7Q15024 291 aaKnown RBP10.32□□□□□ -0.76
GGPS1-201ENST00000282841 PDK3Q15120 406 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 TEAD4Q15561 434 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 MAPK11Q15759 364 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 SAXO2Q658L1 398 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 COMTD1Q86VU5 262 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 PAPD5Q8NDF8 572 aaKnown RBP10.32□□□□□ -0.76
GGPS1-201ENST00000282841 PMM1Q92871 262 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 CCDC74AQ96AQ1 378 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 NEURL3Q96EH8 262 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 MMABQ96EY8 250 aaPredicted RBP10.32□□□□□ -0.76
GGPS1-201ENST00000282841 NDEL1Q9GZM8 345 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 PCED1AQ9H1Q7 454 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 RUBCNLQ9H714 662 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 TESMINQ9Y4I5 508 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 SUV39H1O43463 412 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms