RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 TMEM179BQ7Z7N9 219 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ISG20Q96AZ6 181 aaKnown RBP13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 SAV1Q9H4B6 383 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 EVA1BQ9NVM1 165 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 MRPL39Q9NYK5 338 aaKnown RBP13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 DUSP12Q9UNI6 340 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 AIREO43918 545 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 FGF19O95750 216 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 C1GALT1C1LP0DN25 315 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 LAMP2P13473 410 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 KCNC4Q03721 635 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 MXD1Q05195 221 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CD47Q08722 323 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 EIF2B5Q13144 721 aaKnown RBP13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 C18orf63Q68DL7 685 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CEP68Q76N32 757 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 IQCHQ86VS3 1027 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ADHFE1Q8IWW8 467 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 OR6Q1Q8NGQ2 317 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ENKURQ8TC29 256 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 THAP3Q8WTV1 239 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 LGALS12Q96DT0 336 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 Q96MT0 163 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 TBX5Q99593 518 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 TCF20Q9UGU0 1960 aaKnown RBP13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 M0R3H8 397 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ARHGAP33O14559 1287 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 EML2O95834 649 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 RB1P06400 928 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CELA2BP08218 269 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 SLC15A1P46059 708 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 IL18R1Q13478 541 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 LTB4RQ15722 352 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ZNF404Q494X3 552 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 DNAJC5GQ8N7S2 189 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ANKFN1Q8N957 763 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 GALNT11Q8NCW6 608 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 AKAP1Q92667 903 aaKnown RBP eCLIP13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 TRNT1Q96Q11 434 aaKnown RBP13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 QPCTLQ9NXS2 382 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 TAS2R16Q9NYV7 291 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 MAN2B2Q9Y2E5 1009 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 A0A0X1KG70 313 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 TNFRSF11BO00300 401 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 SEC14L2O76054 403 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 NT5EP21589 574 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 RPS3P23396 243 aaKnown RBP eCLIP13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ARL4DP49703 201 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 AP1S2P56377 157 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 RAB14P61106 215 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 PPP1CAP62136 330 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 GALNT1Q10472 559 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 GRSF1Q12849 480 aaKnown RBP eCLIP13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CLCA4Q14CN2 919 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 Q5BKY6 102 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 TMEM196Q5HYL7 178 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 FAM92BQ6ZTR7 304 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CBARPQ8N350 705 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 IQCF1Q8N6M8 205 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 OR5M3Q8NGP4 307 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CNPPD1Q9BV87 410 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 PCDHA9Q9Y5H5 950 aa13.42□□□□□ -0.26
TNFRSF11A-201ENST00000269485 BCKDKO14874 412 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 HAT1O14929 419 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 POLR1CO15160 346 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 PI15O43692 258 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 RAP2AP10114 183 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 BMP2P12643 396 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 DDCP20711 480 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 PRPS1L1P21108 318 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CTSKP43235 329 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 GP2P55259 537 aaKnown RBP13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CHRNEQ04844 493 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 HYAL1Q12794 435 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CSTF3Q12996 717 aaKnown RBP13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 SNTA1Q13424 505 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 SCARB2Q14108 478 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 MED22Q15528 200 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 LRRC70Q7Z2Q7 622 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 MFSD4AQ8N468 514 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 C10orf53Q8N6V4 93 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 TUBA1CQ9BQE3 449 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 FOXQ1Q9C009 403 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 BTBD1Q9H0C5 482 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CCDC59Q9P031 241 aaKnown RBP13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ZMAT5Q9UDW3 170 aaKnown RBP13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CLDN24A6NM45 220 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 GFRA2O00451 464 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 UGT2B11O75310 529 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 RPS7P62081 194 aaKnown RBP13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 MAP4K2Q12851 820 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 PIN1Q13526 163 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 C6orf141Q5SZD1 244 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 FIGNL1Q6PIW4 674 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 TSSK4Q6SA08 328 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 MINDY1Q8N5J2 469 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 LSM14AQ8ND56 463 aaKnown RBP13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 C16orf58Q96GQ5 468 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 UQCC2Q9BRT2 126 aa13.41□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ZNF576Q9H609 170 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms