RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 ISPDA4D126 451 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 QSOX1O00391 747 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 TMPRSS11DO60235 418 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 HBQ1P09105 142 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 MMP12P39900 470 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 RBBP4Q09028 425 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 TRIM69Q86WT6 500 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 ADGRF3Q8IZF5 1079 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 CRIPAKQ8N1N5 446 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 ZNF614Q8N883 585 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 SMPDL3AQ92484 453 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 ZNF689Q96CS4 500 aaPredicted RBP12.8□□□□□ -0.36
VHL-201ENST00000256474 SLC35G5Q96KT7 338 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 CERS4Q9HA82 394 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 SCN3AQ9NY46 2000 aa12.8□□□□□ -0.36
VHL-201ENST00000256474 C2orf92A0A1B0GVN3 265 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 CCDC182A6NF36 153 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 FAM183AA6NL82 134 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 OR52A4PA6NMU1 304 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 FAM25AB3EWG3 89 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 FAM25CB3EWG5 89 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 FAM25GB3EWG6 89 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 SEMA7AO75326 666 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 PTTG1O95997 202 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 ZNF791Q3KP31 576 aaPredicted RBP12.79□□□□□ -0.36
VHL-201ENST00000256474 SLC35F1Q5T1Q4 408 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 ATAD3CQ5T2N8 411 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 LAPTM4BQ86VI4 370 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 ZNF547Q8IVP9 402 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 ANKRD53Q8N9V6 530 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 SLC35B4Q969S0 331 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 C12orf66Q96MD2 445 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 AIF1LQ9BQI0 150 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 LGR4Q9BXB1 951 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 MKLN1Q9UL63 735 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 N6AMT1Q9Y5N5 214 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 URB1O60287 2271 aaKnown RBP12.79□□□□□ -0.36
VHL-201ENST00000256474 PRRT4C9JH25 899 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 ERI3O43414 337 aaKnown RBP12.79□□□□□ -0.36
VHL-201ENST00000256474 PAK4O96013 591 aaPredicted RBP12.79□□□□□ -0.36
VHL-201ENST00000256474 RB1P06400 928 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 PSKH1P11801 424 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 OPRD1P41143 372 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 PPM1FP49593 454 aaPredicted RBP12.79□□□□□ -0.36
VHL-201ENST00000256474 CLDN2P57739 230 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 DHCR24Q15392 516 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 ZNF57Q68EA5 555 aaPredicted RBP12.79□□□□□ -0.36
VHL-201ENST00000256474 SLC30A6Q6NXT4 461 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 TMEM107Q6UX40 140 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.79□□□□□ -0.36
VHL-201ENST00000256474 OR6T1Q8NGN1 323 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 CXorf40AQ8TE69 158 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 ZAR1LA6NP61 321 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 NR2F6P10588 404 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 CELP19835 753 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 CTNNB1P35222 781 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 UGT2B10P36537 528 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 CD79BP40259 229 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 ETV5P41161 510 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 GPR4P46093 362 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 ETV1P50549 477 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 SNRPD2P62316 118 aaKnown RBP12.79□□□□□ -0.36
VHL-201ENST00000256474 ID2Q02363 134 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 CAMK1Q14012 370 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 IL18Q14116 193 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 CNKSR3Q6P9H4 555 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 ZNF730Q6ZMV8 503 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 ARRDC3Q96B67 414 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 ZG16BQ96DA0 208 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 NELL2Q99435 816 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 HOXD1Q9GZZ0 328 aa12.79□□□□□ -0.36
VHL-201ENST00000256474 RANGRFQ9HD47 186 aaPredicted RBP12.79□□□□□ -0.36
VHL-201ENST00000256474 RPL36Q9Y3U8 105 aaKnown RBP12.79□□□□□ -0.36
VHL-201ENST00000256474 CD8B2A6NJW9 211 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 COQ9O75208 318 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 SLC35G4P0C7Q5 338 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 CD8BP10966 210 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 IL7P13232 177 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 CD72P21854 359 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 TIE1P35590 1138 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 SOX18P35713 384 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 RPS7P62081 194 aaKnown RBP12.78□□□□□ -0.36
VHL-201ENST00000256474 RPS25P62851 125 aaKnown RBP12.78□□□□□ -0.36
VHL-201ENST00000256474 AGAP6Q5VW22 663 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 KHDRBS2Q5VWX1 349 aaKnown RBP12.78□□□□□ -0.36
VHL-201ENST00000256474 RNF165Q6ZSG1 346 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 TECPR1Q7Z6L1 1165 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 COMTD1Q86VU5 262 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 OR4N5Q8IXE1 308 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 DTD2Q96FN9 168 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 FAM46AQ96IP4 442 aaKnown RBP12.78□□□□□ -0.36
VHL-201ENST00000256474 AGAP4Q96P64 663 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 CITED4Q96RK1 184 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 TMEM246Q9BRR3 403 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 MYNNQ9NPC7 610 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 FTSJ1Q9UET6 329 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 CLCA2Q9UQC9 943 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 IGLON5A6NGN9 336 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 LCMT2O60294 686 aaKnown RBP12.78□□□□□ -0.36
VHL-201ENST00000256474 ITGB8P26012 769 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms