RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 OR7G3Q8NG95 312 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 REEP4Q9H6H4 257 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 NMNAT1Q9HAN9 279 aaPredicted RBP16.1■□□□□ 0.17
FOXA1-201ENST00000250448 MUTYHQ9UIF7 546 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 OR1A2Q9Y585 309 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 GON4LQ3T8J9 2241 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 USP34Q70CQ2 3546 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 AZGP1P25311 298 aaKnown RBP16.1■□□□□ 0.17
FOXA1-201ENST00000250448 POU1F1P28069 291 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 SOX3P41225 446 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 RPS13P62277 151 aaKnown RBP16.1■□□□□ 0.17
FOXA1-201ENST00000250448 FGL2Q14314 439 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 WSCD2Q2TBF2 565 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 CCSMST1Q4G0I0 132 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 ZMAT1Q5H9K5 638 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 CRB2Q5IJ48 1285 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 FRMPD2BQ6IN97 320 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 LMNTD1Q8N9Z9 388 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 FAM46DQ8NEK8 389 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 VANGL1Q8TAA9 524 aaPredicted RBP16.1■□□□□ 0.17
FOXA1-201ENST00000250448 DMRTB1Q96MA1 342 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 FZD3Q9NPG1 666 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 C1GALT1Q9NS00 363 aa16.1■□□□□ 0.17
FOXA1-201ENST00000250448 NDRG2Q9UN36 371 aaKnown RBP16.1■□□□□ 0.17
FOXA1-201ENST00000250448 ZFR2Q9UPR6 939 aaKnown RBP16.1■□□□□ 0.17
FOXA1-201ENST00000250448 LSM2Q9Y333 95 aaKnown RBP16.1■□□□□ 0.17
FOXA1-201ENST00000250448 ARRDC5A6NEK1 342 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 CENPXA8MT69 81 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 GASTP01350 101 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 IFNA14P01570 189 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 POU3F3P20264 500 aaPredicted RBP16.09■□□□□ 0.17
FOXA1-201ENST00000250448 C5AR1P21730 350 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 SDE2Q6IQ49 451 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 LAX1Q8IWV1 398 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 TAGAPQ8N103 731 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 RPLP0P6Q8NHW5 317 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 ASZ1Q8WWH4 475 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 PHOX2BQ99453 314 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 TRIM39Q9HCM9 518 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 C11orf16Q9NQ32 467 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 TRBC2A0A5B9 178 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 CENPBD1B2RD01 187 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 SCAMP1O15126 338 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 ATG13O75143 517 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 GUCY1B2O75343 617 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 ENTPD6O75354 484 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 DGKEP52429 567 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 PCDH1Q08174 1060 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 ZNF763Q0D2J5 394 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 CDK10Q15131 360 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 ZNF79Q15937 498 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 ZNF630Q2M218 657 aaPredicted RBP16.09■□□□□ 0.17
FOXA1-201ENST00000250448 TRIM40Q6P9F5 258 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 TRIM69Q86WT6 500 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 ZNF547Q8IVP9 402 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 CIDECQ96AQ7 238 aaPredicted RBP16.09■□□□□ 0.17
FOXA1-201ENST00000250448 WDFY2Q96P53 400 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 SRRQ9GZT4 340 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 SLC25A19Q9HC21 320 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 RHCGQ9UBD6 479 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 SEC14L4Q9UDX3 406 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 TMA7Q9Y2S6 64 aaKnown RBP16.09■□□□□ 0.17
FOXA1-201ENST00000250448 MAP4K5Q9Y4K4 846 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 SCO2O43819 266 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 CSO75390 466 aaKnown RBP16.09■□□□□ 0.17
FOXA1-201ENST00000250448 PSIP1O75475 530 aaKnown RBP16.09■□□□□ 0.17
FOXA1-201ENST00000250448 ADH1BP00325 375 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 CKMT1AP12532 417 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 IL7P13232 177 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 RHCEP18577 417 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 CSTF2P33240 577 aaKnown RBP eCLIP16.09■□□□□ 0.17
FOXA1-201ENST00000250448 PRLHRP49683 370 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 RORCP51449 518 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 PSPHP78330 225 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 TFF2Q03403 129 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 BAK1Q16611 211 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 TBRG1Q3YBR2 411 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 GDPGP1Q6ZNW5 385 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 LAS2Q8IYD9 372 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 CFAP206Q8IYR0 622 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 OR5AK3PQ8NH89 298 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 RAB7BQ96AH8 199 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 DEPDC7Q96QD5 511 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 IL4I1Q96RQ9 567 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 TM7SF3Q9NS93 570 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 ANGPT4Q9Y264 503 aa16.09■□□□□ 0.17
FOXA1-201ENST00000250448 SHISA7A6NL88 538 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 FAM227AF5H4B4 570 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 TLR4O00206 839 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 ARAFP10398 606 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 CHI3L1P36222 383 aaPredicted RBP16.08■□□□□ 0.16
FOXA1-201ENST00000250448 BDKRB1P46663 353 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 PCBP3P57721 371 aaKnown RBP16.08■□□□□ 0.16
FOXA1-201ENST00000250448 TMEM92Q6UXU6 159 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 BPHLQ86WA6 291 aaPredicted RBP16.08■□□□□ 0.16
FOXA1-201ENST00000250448 GALNT12Q8IXK2 581 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 KLHDC8AQ8IYD2 350 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 GALNT6Q8NCL4 622 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 TMEM159Q96B96 161 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 GABRG3Q99928 467 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms