RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ZNF548Q8NEK5 533 aaPredicted RBP11.46□□□□□ -0.57
CHPF2-201ENST00000035307 OR52E1Q8NGJ3 308 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 OR51A7Q8NH64 312 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 SLC6A18Q96N87 628 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 CAMK1GQ96NX5 476 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 ZNF347Q96SE7 839 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 PRR14Q9BWN1 585 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 TSSK6Q9BXA6 273 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 ITPAQ9BY32 194 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 STOML2Q9UJZ1 356 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 IKZF2Q9UKS7 526 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 MAU2Q9Y6X3 613 aa11.46□□□□□ -0.57
CHPF2-201ENST00000035307 FAM240BA0A1B0GVZ2 78 aa11.46□□□□□ -0.58
CHPF2-201ENST00000035307 BCAS1O75363 584 aaPredicted RBP11.46□□□□□ -0.58
CHPF2-201ENST00000035307 CDRT1O95170 752 aa11.46□□□□□ -0.58
CHPF2-201ENST00000035307 CNR2P34972 360 aa11.46□□□□□ -0.58
CHPF2-201ENST00000035307 OPRL1P41146 370 aa11.46□□□□□ -0.58
CHPF2-201ENST00000035307 NKX2-5P52952 324 aaPredicted RBP11.46□□□□□ -0.58
CHPF2-201ENST00000035307 SP140Q13342 867 aa11.46□□□□□ -0.58
CHPF2-201ENST00000035307 ARL9Q6T311 187 aa11.46□□□□□ -0.58
CHPF2-201ENST00000035307 NRSN1Q8IZ57 195 aa11.46□□□□□ -0.58
CHPF2-201ENST00000035307 PIGXQ8TBF5 258 aa11.46□□□□□ -0.58
CHPF2-201ENST00000035307 POFUT2Q9Y2G5 429 aa11.46□□□□□ -0.58
CHPF2-201ENST00000035307 WDR37Q9Y2I8 494 aa11.46□□□□□ -0.58
CHPF2-201ENST00000035307 POLR1DQ9Y2S0 133 aa11.46□□□□□ -0.58
CHPF2-201ENST00000035307 CCDC182A6NF36 153 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 URADA6NGE7 173 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 CAPN5O15484 640 aaPredicted RBP11.45□□□□□ -0.58
CHPF2-201ENST00000035307 OR6A2O95222 327 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 CLCN2P51788 898 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 EPHA5P54756 1037 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 ACVR1Q04771 509 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 CMPK2Q5EBM0 449 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 FIGNL1Q6PIW4 674 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 ASB18Q6ZVZ8 466 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 LUZP2Q86TE4 346 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 AMIGO1Q86WK6 493 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.45□□□□□ -0.58
CHPF2-201ENST00000035307 SPARTQ8N0X7 666 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.45□□□□□ -0.58
CHPF2-201ENST00000035307 HMGCLL1Q8TB92 370 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 MCCC1Q96RQ3 725 aaPredicted RBP11.45□□□□□ -0.58
CHPF2-201ENST00000035307 SLC6A16Q9GZN6 736 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 OR51I1Q9H343 314 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 MCUBQ9NWR8 336 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 PAK1IP1Q9NWT1 392 aaPredicted RBP11.45□□□□□ -0.58
CHPF2-201ENST00000035307 TMPRSS11EQ9UL52 423 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 NPIPA5A0A0B4J1W7 369 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 NPIPA7E9PJI5 369 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 ACOX3O15254 700 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 VEGFDO43915 354 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 NPIPA8P0DM63 369 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 TAP2Q03519 686 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 KCNC4Q03721 635 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 GNA13Q14344 377 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 TOMM20Q15388 145 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 COX20Q5RI15 118 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 SHQ1Q6PI26 577 aaKnown RBP11.45□□□□□ -0.58
CHPF2-201ENST00000035307 NEK10Q6ZWH5 1172 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 PEX5LQ8IYB4 626 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 ZNF563Q8TA94 476 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 ZNF675Q8TD23 568 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 C11orf24Q96F05 449 aaPredicted RBP11.45□□□□□ -0.58
CHPF2-201ENST00000035307 RTTNQ86VV8 2226 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 PDCD11Q14690 1871 aaKnown RBP11.45□□□□□ -0.58
CHPF2-201ENST00000035307 PRSS38A1L453 326 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 H0YAE9 185 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 GAPDHSO14556 408 aaPredicted RBP11.45□□□□□ -0.58
CHPF2-201ENST00000035307 RPS3P23396 243 aaKnown RBP eCLIP11.45□□□□□ -0.582e-7■□□□□ 10.7
CHPF2-201ENST00000035307 GADD45AP24522 165 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 GPR4P46093 362 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 PRLHRP49683 370 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 STXBP1P61764 594 aaKnown RBP11.45□□□□□ -0.58
CHPF2-201ENST00000035307 GSTM4Q03013 218 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 ERV3-1Q14264 604 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 ZNF829Q3KNS6 432 aaPredicted RBP11.45□□□□□ -0.58
CHPF2-201ENST00000035307 B3GLCTQ6Y288 498 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 ELSPBP1Q96BH3 223 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 NTMT1Q9BV86 223 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 CLMPQ9H6B4 373 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 ERVK13-1Q9NX77 482 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 TBC1D29Q9UFV1 150 aa11.45□□□□□ -0.58
CHPF2-201ENST00000035307 WBP11Q9Y2W2 641 aaKnown RBP11.45□□□□□ -0.58
CHPF2-201ENST00000035307 H7C0S8 307 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 NUAK1O60285 661 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 CELP19835 753 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 UGT8Q16880 541 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 ZNF630Q2M218 657 aaPredicted RBP11.44□□□□□ -0.58
CHPF2-201ENST00000035307 AKAP14Q86UN6 197 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 ETFBKMTQ8IXQ9 262 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 ZNF655Q8N720 491 aaPredicted RBP11.44□□□□□ -0.58
CHPF2-201ENST00000035307 CHDHQ8NE62 594 aaPredicted RBP11.44□□□□□ -0.58
CHPF2-201ENST00000035307 SRFBP1Q8NEF9 429 aaKnown RBP11.44□□□□□ -0.58
CHPF2-201ENST00000035307 ABHD11Q8NFV4 315 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 OR51L1Q8NGJ5 315 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 RHNO1Q9BSD3 238 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 BEX1Q9HBH7 125 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 SLC6A13Q9NSD5 602 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 PCDH17O14917 1159 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 HAT1O14929 419 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms