RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Klf8Q8BLM0 355 aaKnown RBP9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Nt5dc1Q8C5P5 467 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ahsa2Q8N9S3 331 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Col26a1Q91VF6 440 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Pcdhga11Q91XY8 933 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Pbx4Q99NE9 378 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 FancgQ9EQR6 623 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Nusap1Q9ERH4 427 aaKnown RBP9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Serinc3Q9QZI9 472 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm16432A0A0A6YXX9 775 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ephb6O08644 1014 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Clcn7O70496 803 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Hoxd4P10628 250 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Cct3P80318 545 aaKnown RBP9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Bcl2a1Q07440 172 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tgm3Q08189 693 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Fads2p1Q0VAX3 487 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Prr5Q812A5 387 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 SynbQ8BI41 618 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Itih5Q8BJD1 952 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm10330Q8BKS1 112 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ndrg4Q8BTG7 352 aaKnown RBP9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 E330021D16RikQ8BW45 371 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Olfr77Q8VEY9 312 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Olfr525Q8VGL5 309 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Fam3cQ91VU0 227 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Vmp1Q99KU0 406 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ncbp2Q9CQ49 156 aaKnown RBP9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Adck1Q9D0L4 525 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Hhipl2Q9D2G9 717 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Nectin3Q9JLB9 549 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Spo11Q9WTK8 396 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Plxna1P70206 1894 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Trpm7Q923J1 1863 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Cep290Q6A078 2472 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Igkv18-36A0A075B5M9 114 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tbc1d25A1A5B6 742 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 4930455H04RikD3Z622 58 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Dgcr6O35347 198 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Zw10O54692 779 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Mpzl2O70255 215 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Grem1O70326 184 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tmem199Q5SYH2 208 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Bdkrb1Q61125 334 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Smad2Q62432 467 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tas2r38Q7TQA6 331 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Aldh3b1Q80VQ0 468 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Arhgap22Q8BL80 702 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Fndc5Q8K4Z2 209 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Olfr380Q8VGT3 311 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 EdaraddQ8VHX2 208 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Cd209aQ91ZX1 238 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Mrpl15Q9CPR5 295 aaKnown RBP9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Trmt5Q9D0C4 501 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Vmn1r52Q9EP79 309 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tssc4Q9JHE7 317 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Lama3Q61789 3330 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm13078A2AGW8 474 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Chd3B1AR17 2055 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Pdlim1O70400 327 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Capns1O88456 269 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Aldh1a1P24549 501 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Hoxc5P32043 222 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ly6dP35459 127 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Adamts8P57110 905 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Mrps6P58064 125 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 KapP61110 121 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Rgs16P97428 201 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Spata6Q3U6K5 488 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Coq8aQ60936 645 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Amer3Q6NS69 780 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gper1Q8BMP4 375 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Q8K207 121 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Vmn1r201Q8R262 300 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Utp4Q8R2N2 686 aaKnown RBP9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tmcc3Q8R310 477 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Impa2Q91UZ5 290 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Oosp1Q925U0 202 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ephx1Q9D379 455 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Sec23bQ9D662 767 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Q9DAD0 168 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Spata19Q9DAQ9 154 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Psmg2Q9EST4 264 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Sppl2aQ9JJF9 523 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Clca3a1Q9QX15 902 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Frem3Q5H8B9 2123 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Trpm6Q8CIR4 2028 aa9.28□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Cfap77A0A087WRI3 283 aa9.27□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm6710A2ART0 554 aa9.27□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Znf382B2RXC5 579 aa9.27□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Pgbd5D3YZI9 523 aa9.27□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gpr137cE9Q343 423 aa9.27□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Zfp995E9Q6M3 437 aa9.27□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Rdh5O55240 318 aa9.27□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ccr3P51678 359 aa9.27□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 InhaQ04997 366 aa9.27□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Mat2aQ3THS6 395 aaKnown RBP9.27□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ankrd42Q3V096 527 aa9.27□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Irf4Q64287 450 aa9.27□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 St8sia4Q64692 359 aa9.27□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms