RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C PPR1P07272 904 aaPredicted RBP1.05□□□□□ -2.24
NIP1YMR309C CYC8P14922 966 aa1.05□□□□□ -2.24
NIP1YMR309C RER2P35196 286 aa1.05□□□□□ -2.24
NIP1YMR309C SPC42P36094 363 aa1.05□□□□□ -2.24
NIP1YMR309C ECM21P38167 1117 aaKnown RBP1.05□□□□□ -2.24
NIP1YMR309C CCC2P38995 1004 aa1.05□□□□□ -2.24
NIP1YMR309C ERG5P54781 538 aa1.05□□□□□ -2.24
NIP1YMR309C SEC5P89102 971 aa1.05□□□□□ -2.24
NIP1YMR309C YML020WQ03722 664 aa1.05□□□□□ -2.24
NIP1YMR309C SPR28Q04921 423 aa1.05□□□□□ -2.24
NIP1YMR309C FUN30P31380 1131 aa1.05□□□□□ -2.24
NIP1YMR309C ASF1P32447 279 aa1.05□□□□□ -2.24
NIP1YMR309C STE14P32584 239 aa1.05□□□□□ -2.24
NIP1YMR309C YKL151CP36059 337 aa1.05□□□□□ -2.24
NIP1YMR309C SEN54Q02825 467 aaPredicted RBP1.05□□□□□ -2.24
NIP1YMR309C MUK1Q02866 612 aa1.05□□□□□ -2.24
NIP1YMR309C HOF1Q05080 669 aa1.05□□□□□ -2.24
NIP1YMR309C COQ11Q05892 277 aa1.05□□□□□ -2.24
NIP1YMR309C MDM38Q08179 573 aa1.05□□□□□ -2.24
NIP1YMR309C UPC2Q12151 913 aa1.05□□□□□ -2.24
NIP1YMR309C ALG7P07286 448 aa1.04□□□□□ -2.24
NIP1YMR309C HEM3P28789 327 aa1.04□□□□□ -2.24
NIP1YMR309C RPC82P32349 654 aa1.04□□□□□ -2.24
NIP1YMR309C SRP101P32916 621 aa1.04□□□□□ -2.24
NIP1YMR309C PET112P33893 541 aa1.04□□□□□ -2.24
NIP1YMR309C MOT2P34909 587 aaKnown RBP1.04□□□□□ -2.24
NIP1YMR309C FYV10P40492 516 aa1.04□□□□□ -2.24
NIP1YMR309C SDS3P40505 327 aa1.04□□□□□ -2.24
NIP1YMR309C SCS3P53012 380 aa1.04□□□□□ -2.24
NIP1YMR309C CWC24P53769 259 aa1.04□□□□□ -2.24
NIP1YMR309C SRT1Q03175 343 aa1.04□□□□□ -2.24
NIP1YMR309C OYE2Q03558 400 aaKnown RBP1.04□□□□□ -2.24
NIP1YMR309C HBT1Q07653 1046 aaKnown RBP1.04□□□□□ -2.24
NIP1YMR309C RTT10Q08924 1013 aa1.04□□□□□ -2.24
NIP1YMR309C TMA46Q12000 345 aaKnown RBP1.04□□□□□ -2.24
NIP1YMR309C ILV6P25605 309 aaKnown RBP1.04□□□□□ -2.24
NIP1YMR309C GIC1P38785 314 aa1.04□□□□□ -2.24
NIP1YMR309C SNF7P39929 240 aaKnown RBP1.04□□□□□ -2.24
NIP1YMR309C KRI1P42846 591 aaKnown RBP1.04□□□□□ -2.24
NIP1YMR309C IMO32P53219 342 aa1.04□□□□□ -2.24
NIP1YMR309C SLU7Q02775 382 aaKnown RBP1.04□□□□□ -2.24
NIP1YMR309C SPO20Q04359 397 aa1.04□□□□□ -2.24
NIP1YMR309C HRQ1Q05549 1077 aa1.04□□□□□ -2.24
NIP1YMR309C WHI4Q07655 649 aaKnown RBP1.04□□□□□ -2.24
NIP1YMR309C TRM13Q12383 476 aa1.04□□□□□ -2.24
NIP1YMR309C YNL162W-AQ3E7A8 72 aa1.04□□□□□ -2.24
NIP1YMR309C INO1P11986 533 aa1.03□□□□□ -2.24
NIP1YMR309C NOP1P15646 327 aaKnown RBP1.03□□□□□ -2.24
NIP1YMR309C ATE1P16639 503 aa1.03□□□□□ -2.24
NIP1YMR309C CAD1P24813 409 aaKnown RBP1.03□□□□□ -2.24
NIP1YMR309C LYP1P32487 611 aa1.03□□□□□ -2.24
NIP1YMR309C TMT1P32643 299 aa1.03□□□□□ -2.24
NIP1YMR309C YKL107WP34251 309 aa1.03□□□□□ -2.24
NIP1YMR309C YJR107WP47145 328 aa1.03□□□□□ -2.24
NIP1YMR309C RMD1Q03441 430 aa1.03□□□□□ -2.24
NIP1YMR309C YMR206WQ03695 313 aa1.03□□□□□ -2.24
NIP1YMR309C SUT2Q12286 268 aa1.03□□□□□ -2.24
NIP1YMR309C TUB1P09733 447 aaKnown RBP1.03□□□□□ -2.25
NIP1YMR309C YHL017WP38745 532 aa1.03□□□□□ -2.25
NIP1YMR309C SAH1P39954 449 aaKnown RBP1.03□□□□□ -2.25
NIP1YMR309C MAD1P40957 749 aa1.03□□□□□ -2.25
NIP1YMR309C YGL176CP46945 554 aa1.03□□□□□ -2.25
NIP1YMR309C DAS1P47005 663 aa1.03□□□□□ -2.25
NIP1YMR309C NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.03□□□□□ -2.25not detected
NIP1YMR309C YPR196WQ06595 470 aa1.03□□□□□ -2.25
NIP1YMR309C MRH1Q12117 320 aaPredicted RBP1.03□□□□□ -2.25
NIP1YMR309C YPL066WQ12194 479 aa1.03□□□□□ -2.25
NIP1YMR309C RKM4Q12504 494 aa1.03□□□□□ -2.25
NIP1YMR309C BNR1P40450 1375 aa1.02□□□□□ -2.25
NIP1YMR309C TRP2P00899 507 aaKnown RBP1.02□□□□□ -2.25
NIP1YMR309C GFA1P14742 717 aaKnown RBP1.02□□□□□ -2.25
NIP1YMR309C MDM10P18409 493 aa1.02□□□□□ -2.25
NIP1YMR309C SED4P25365 1065 aa1.02□□□□□ -2.25
NIP1YMR309C NPP2P39997 493 aa1.02□□□□□ -2.25
NIP1YMR309C TYW3P53177 273 aa1.02□□□□□ -2.25
NIP1YMR309C YLR225CQ05948 407 aaKnown RBP1.02□□□□□ -2.25
NIP1YMR309C ADY4Q05955 493 aa1.02□□□□□ -2.25
NIP1YMR309C FBP1P09201 348 aa1.01□□□□□ -2.25
NIP1YMR309C PEX2P32800 271 aa1.01□□□□□ -2.25
NIP1YMR309C PPS1P38148 807 aa1.01□□□□□ -2.25
NIP1YMR309C RIX1P38883 763 aaPredicted RBP1.01□□□□□ -2.25
NIP1YMR309C TAH11P47112 604 aa1.01□□□□□ -2.25
NIP1YMR309C FRE5Q08908 694 aa1.01□□□□□ -2.25
NIP1YMR309C FAL1Q12099 399 aaKnown RBP1.01□□□□□ -2.25
NIP1YMR309C CDC34P14682 295 aa1.01□□□□□ -2.25
NIP1YMR309C CLN2P20438 545 aa1.01□□□□□ -2.25
NIP1YMR309C NAP1P25293 417 aaKnown RBP1.01□□□□□ -2.25
NIP1YMR309C PPH3P32345 308 aa1.01□□□□□ -2.25
NIP1YMR309C DUT1P33317 147 aa1.01□□□□□ -2.25
NIP1YMR309C PPZ2P33329 710 aa1.01□□□□□ -2.25
NIP1YMR309C PIN4P34217 668 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
NIP1YMR309C CTF13P35203 478 aa1.01□□□□□ -2.25
NIP1YMR309C MNR2P35724 969 aa1.01□□□□□ -2.25
NIP1YMR309C FLO10P36170 1169 aa1.01□□□□□ -2.25
NIP1YMR309C TDP1P38319 544 aa1.01□□□□□ -2.25
NIP1YMR309C YBR238CP38330 731 aaKnown RBP1.01□□□□□ -2.25
NIP1YMR309C GLO1P50107 326 aa1.01□□□□□ -2.25
NIP1YMR309C VPS73P53142 486 aaKnown RBP1.01□□□□□ -2.25
NIP1YMR309C SRP1Q02821 542 aaKnown RBP1.01□□□□□ -2.25
NIP1YMR309C EEB1Q02891 456 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms