RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W BUD16P39988 312 aa6.85□□□□□ -1.31
GEF1YJR040W EFM4P40516 257 aa6.85□□□□□ -1.31
GEF1YJR040W STE20Q03497 939 aaKnown RBP6.85□□□□□ -1.31
GEF1YJR040W ALG1P16661 449 aa6.85□□□□□ -1.31
GEF1YJR040W SAM2P19358 384 aaKnown RBP6.85□□□□□ -1.31
GEF1YJR040W ACE2P21192 770 aa6.85□□□□□ -1.31
GEF1YJR040W SPO11P23179 398 aa6.85□□□□□ -1.31
GEF1YJR040W RAD57P25301 460 aa6.85□□□□□ -1.31
GEF1YJR040W PCS60P38137 543 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31 RIP-Chip
GEF1YJR040W UTP5Q04177 643 aaKnown RBP6.85□□□□□ -1.31
GEF1YJR040W YOR296WQ08748 1289 aa6.85□□□□□ -1.31
GEF1YJR040W YPL216WQ08964 1102 aa6.85□□□□□ -1.31
GEF1YJR040W CWC2Q12046 339 aaPredicted RBP6.85□□□□□ -1.31
GEF1YJR040W THR4P16120 514 aaKnown RBP6.84□□□□□ -1.31
GEF1YJR040W CLB4P24871 460 aa6.84□□□□□ -1.31
GEF1YJR040W BUD14P27637 709 aa6.84□□□□□ -1.31
GEF1YJR040W SRB4P32569 687 aa6.84□□□□□ -1.31
GEF1YJR040W VPS53P47061 822 aa6.84□□□□□ -1.31
GEF1YJR040W VTC3Q02725 835 aa6.84□□□□□ -1.31
GEF1YJR040W NFI1Q12216 726 aa6.84□□□□□ -1.31
GEF1YJR040W YLL054CQ12244 843 aa6.84□□□□□ -1.31
GEF1YJR040W MYO1P08964 1928 aa6.84□□□□□ -1.31
GEF1YJR040W TOM70P07213 617 aaKnown RBP6.84□□□□□ -1.31
GEF1YJR040W PDC6P26263 563 aaKnown RBP6.84□□□□□ -1.31
GEF1YJR040W SSP1P38871 571 aa6.84□□□□□ -1.31
GEF1YJR040W SPR3P41901 512 aa6.84□□□□□ -1.31
GEF1YJR040W AIP1P46680 615 aaKnown RBP6.84□□□□□ -1.31
GEF1YJR040W HFM1P51979 1187 aa6.84□□□□□ -1.31
GEF1YJR040W BNI5P53890 448 aaKnown RBP6.84□□□□□ -1.31
GEF1YJR040W NCS2P53923 493 aaPredicted RBP6.84□□□□□ -1.31
GEF1YJR040W YML037CQ03703 340 aa6.84□□□□□ -1.31
GEF1YJR040W CSM3Q04659 317 aa6.84□□□□□ -1.31
GEF1YJR040W GUD1Q07729 489 aa6.84□□□□□ -1.31
GEF1YJR040W GCD2P12754 651 aaPredicted RBP6.83□□□□□ -1.32
GEF1YJR040W HIR1P32479 840 aa6.83□□□□□ -1.32
GEF1YJR040W SEC66P33754 206 aa6.83□□□□□ -1.32
GEF1YJR040W VFA1P40080 203 aa6.83□□□□□ -1.32
GEF1YJR040W YAP5P40574 245 aa6.83□□□□□ -1.32
GEF1YJR040W ALD6P54115 500 aaKnown RBP6.83□□□□□ -1.32
GEF1YJR040W SOV1Q04748 898 aa6.83□□□□□ -1.32
GEF1YJR040W UTP4Q06679 776 aaKnown RBP6.83□□□□□ -1.32
GEF1YJR040W CIR2Q08822 631 aa6.83□□□□□ -1.32
GEF1YJR040W HVG1P0CE11 249 aa6.83□□□□□ -1.32
GEF1YJR040W STI1P15705 589 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
GEF1YJR040W YKR023WP36119 530 aaKnown RBP6.83□□□□□ -1.32
GEF1YJR040W PHO88P38264 188 aaPredicted RBP6.83□□□□□ -1.32
GEF1YJR040W BCD1P38772 366 aa6.83□□□□□ -1.32
GEF1YJR040W YMR124WP39523 943 aaKnown RBP6.83□□□□□ -1.32
GEF1YJR040W GPB2P39717 880 aa6.83□□□□□ -1.32
GEF1YJR040W IES1P43579 692 aa6.83□□□□□ -1.32
GEF1YJR040W INP2Q03824 705 aa6.83□□□□□ -1.32
GEF1YJR040W CST9Q06032 482 aa6.83□□□□□ -1.32
GEF1YJR040W YLR177WQ06251 628 aa6.83□□□□□ -1.32
GEF1YJR040W TUF1P02992 437 aaKnown RBP6.82□□□□□ -1.32
GEF1YJR040W RAD18P10862 487 aa6.82□□□□□ -1.32
GEF1YJR040W IME1P21190 360 aa6.82□□□□□ -1.32
GEF1YJR040W LOS1P33418 1100 aaPredicted RBP6.82□□□□□ -1.32
GEF1YJR040W ERG7P38604 731 aa6.82□□□□□ -1.32
GEF1YJR040W RSC30P38781 883 aa6.82□□□□□ -1.32
GEF1YJR040W PAN5P38787 379 aa6.82□□□□□ -1.32
GEF1YJR040W VID30P53076 958 aa6.82□□□□□ -1.32
GEF1YJR040W MFM1Q02783 413 aa6.82□□□□□ -1.32
GEF1YJR040W TFB2Q02939 513 aa6.82□□□□□ -1.32
GEF1YJR040W NGL3Q03210 505 aa6.82□□□□□ -1.32
GEF1YJR040W OYE2Q03558 400 aaKnown RBP6.82□□□□□ -1.32
GEF1YJR040W YKU80Q04437 629 aa6.82□□□□□ -1.32
GEF1YJR040W SPO75Q07798 868 aa6.82□□□□□ -1.32
GEF1YJR040W YAP7Q08182 245 aa6.82□□□□□ -1.32
GEF1YJR040W YOR389WQ08912 624 aa6.82□□□□□ -1.32
GEF1YJR040W NKP1Q12493 238 aa6.82□□□□□ -1.32
GEF1YJR040W RAD5P32849 1169 aaPredicted RBP6.82□□□□□ -1.32
GEF1YJR040W NFU1P32860 256 aa6.82□□□□□ -1.32
GEF1YJR040W MCD4P36051 919 aa6.82□□□□□ -1.32
GEF1YJR040W ECM4P36156 370 aa6.82□□□□□ -1.32
GEF1YJR040W DAK2P43550 591 aa6.82□□□□□ -1.32
GEF1YJR040W ASE1P50275 885 aa6.82□□□□□ -1.32
GEF1YJR040W ADA2Q02336 434 aa6.82□□□□□ -1.32
GEF1YJR040W TRS120Q04183 1289 aa6.82□□□□□ -1.32
GEF1YJR040W FAR8Q05040 523 aa6.82□□□□□ -1.32
GEF1YJR040W RSA3Q05942 220 aaKnown RBP6.82□□□□□ -1.32
GEF1YJR040W CDC8P00572 216 aa6.81□□□□□ -1.32
GEF1YJR040W PPR1P07272 904 aaPredicted RBP6.81□□□□□ -1.32
GEF1YJR040W CNS1P33313 385 aa6.81□□□□□ -1.32
GEF1YJR040W SIP3P38717 1229 aa6.81□□□□□ -1.32
GEF1YJR040W PNT1P38969 423 aa6.81□□□□□ -1.32
GEF1YJR040W STT3P39007 718 aaKnown RBP6.81□□□□□ -1.32
GEF1YJR040W AIM20P40451 204 aa6.81□□□□□ -1.32
GEF1YJR040W YRB1P41920 201 aaKnown RBP6.81□□□□□ -1.32
GEF1YJR040W FMS1P50264 508 aa6.81□□□□□ -1.32
GEF1YJR040W JJJ1P53863 590 aa6.81□□□□□ -1.32
GEF1YJR040W UBX5Q06682 500 aa6.81□□□□□ -1.32
GEF1YJR040W SLK19Q08581 821 aaKnown RBP6.81□□□□□ -1.32
GEF1YJR040W ABP140Q08641 628 aaKnown RBP6.81□□□□□ -1.32
GEF1YJR040W NUR1Q12066 484 aa6.81□□□□□ -1.32
GEF1YJR040W RMP1Q12530 201 aa6.81□□□□□ -1.32
GEF1YJR040W CKA2P19454 339 aa6.81□□□□□ -1.32
GEF1YJR040W KAR9P32526 644 aa6.81□□□□□ -1.32
GEF1YJR040W UGA4P32837 571 aa6.81□□□□□ -1.32
GEF1YJR040W TFC3P34111 1160 aa6.81□□□□□ -1.32
GEF1YJR040W TGL1P34163 548 aa6.81□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms