RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C MDM38Q08179 573 aa2.87□□□□□ -1.95
VPS35YJL154C TOK1P40310 691 aa2.86□□□□□ -1.95
VPS35YJL154C HLJ1P48353 224 aa2.86□□□□□ -1.95
VPS35YJL154C ENV11P53246 860 aa2.86□□□□□ -1.95
VPS35YJL154C DAM1P53267 343 aa2.86□□□□□ -1.95
VPS35YJL154C UGO1Q03327 502 aa2.86□□□□□ -1.95
VPS35YJL154C RCL1Q08096 367 aaPredicted RBP2.86□□□□□ -1.95
VPS35YJL154C NTG2Q08214 380 aa2.86□□□□□ -1.95
VPS35YJL154C ADR1P07248 1323 aa2.86□□□□□ -1.95
VPS35YJL154C ENA1P13587 1091 aa2.86□□□□□ -1.95
VPS35YJL154C LIP5P32875 414 aa2.86□□□□□ -1.95
VPS35YJL154C PGM1P33401 570 aaKnown RBP2.86□□□□□ -1.95
VPS35YJL154C YKR078WP36158 585 aaKnown RBP2.86□□□□□ -1.95
VPS35YJL154C TOS1P38288 455 aa2.86□□□□□ -1.95
VPS35YJL154C SDH1Q00711 640 aa2.86□□□□□ -1.95
VPS35YJL154C ENA2Q01896 1091 aa2.86□□□□□ -1.95
VPS35YJL154C YDR514CQ04408 483 aa2.86□□□□□ -1.95
VPS35YJL154C ENA5Q12691 1091 aa2.86□□□□□ -1.95
VPS35YJL154C NOP14Q99207 810 aaKnown RBP2.86□□□□□ -1.95
VPS35YJL154C TSR4P25040 408 aa2.85□□□□□ -1.95
VPS35YJL154C GYP7P48365 746 aa2.85□□□□□ -1.95
VPS35YJL154C SRT1Q03175 343 aa2.85□□□□□ -1.95
VPS35YJL154C ACE2P21192 770 aa2.85□□□□□ -1.95
VPS35YJL154C RPC82P32349 654 aa2.85□□□□□ -1.95
VPS35YJL154C SAP190P36123 1033 aa2.85□□□□□ -1.95
VPS35YJL154C PEX7P39108 375 aa2.85□□□□□ -1.95
VPS35YJL154C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
VPS35YJL154C YJR142WP47173 342 aa2.85□□□□□ -1.95
VPS35YJL154C PSP2P50109 593 aaKnown RBP2.85□□□□□ -1.95
VPS35YJL154C YGL081WP53156 320 aa2.85□□□□□ -1.95
VPS35YJL154C TFB2Q02939 513 aa2.85□□□□□ -1.95
VPS35YJL154C GCD1P09032 578 aaPredicted RBP2.84□□□□□ -1.95
VPS35YJL154C MPH2P0CD99 609 aa2.84□□□□□ -1.95
VPS35YJL154C CRP1P38845 465 aaKnown RBP2.84□□□□□ -1.95
VPS35YJL154C PUS2P53167 370 aa2.84□□□□□ -1.95
VPS35YJL154C ATG13Q06628 738 aa2.84□□□□□ -1.95
VPS35YJL154C REH1Q06709 432 aa2.84□□□□□ -1.95
VPS35YJL154C NUP145P49687 1317 aa2.84□□□□□ -1.95
VPS35YJL154C ERT1P38140 529 aa2.84□□□□□ -1.95
VPS35YJL154C LSB3P43603 459 aaKnown RBP2.84□□□□□ -1.95
VPS35YJL154C NPP1P25353 742 aa2.83□□□□□ -1.96
VPS35YJL154C VBA3P25594 458 aa2.83□□□□□ -1.96
VPS35YJL154C YKL151CP36059 337 aa2.83□□□□□ -1.96
VPS35YJL154C TSL1P38427 1098 aaKnown RBP2.83□□□□□ -1.96
VPS35YJL154C GIC1P38785 314 aa2.83□□□□□ -1.96
VPS35YJL154C SHR5P41912 237 aa2.83□□□□□ -1.96
VPS35YJL154C CCT8P47079 568 aaKnown RBP2.83□□□□□ -1.96
VPS35YJL154C HFM1P51979 1187 aa2.83□□□□□ -1.96
VPS35YJL154C SFB2P53953 876 aa2.83□□□□□ -1.96
VPS35YJL154C TY1B-DR4Q07793 1604 aa2.83□□□□□ -1.96
VPS35YJL154C CMP2P14747 604 aa2.83□□□□□ -1.96
VPS35YJL154C EMC3P36039 253 aa2.83□□□□□ -1.96
VPS35YJL154C YBR238CP38330 731 aaKnown RBP2.83□□□□□ -1.96
VPS35YJL154C DOT6P40059 670 aaKnown RBP2.83□□□□□ -1.96
VPS35YJL154C SDA1P53313 767 aaKnown RBP2.83□□□□□ -1.96
VPS35YJL154C RPP2AP05319 106 aaKnown RBP2.83□□□□□ -1.96
VPS35YJL154C NOT3P06102 836 aaKnown RBP2.83□□□□□ -1.96
VPS35YJL154C SRP101P32916 621 aa2.83□□□□□ -1.96
VPS35YJL154C SPC29P33419 253 aa2.83□□□□□ -1.96
VPS35YJL154C STO1P34160 861 aaKnown RBP2.83□□□□□ -1.96
VPS35YJL154C RPN10P38886 268 aaKnown RBP2.83□□□□□ -1.96
VPS35YJL154C ZRG8P40021 1076 aa2.83□□□□□ -1.96
VPS35YJL154C CEP3P40969 608 aa2.83□□□□□ -1.96
VPS35YJL154C NOG2P53742 486 aaKnown RBP2.83□□□□□ -1.96
VPS35YJL154C DNM1P54861 757 aa2.83□□□□□ -1.96
VPS35YJL154C MET7Q08645 548 aa2.83□□□□□ -1.96
VPS35YJL154C TRP3P00937 484 aa2.82□□□□□ -1.96
VPS35YJL154C HSF1P10961 833 aa2.82□□□□□ -1.96
VPS35YJL154C HSP78P33416 811 aa2.82□□□□□ -1.96
VPS35YJL154C OMA1P36163 345 aa2.82□□□□□ -1.96
VPS35YJL154C YAP1801P38856 637 aa2.82□□□□□ -1.96
VPS35YJL154C ALO1P54783 526 aaKnown RBP2.82□□□□□ -1.96
VPS35YJL154C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
VPS35YJL154C TCB3Q03640 1545 aaKnown RBP2.82□□□□□ -1.96
VPS35YJL154C RAD18P10862 487 aa2.82□□□□□ -1.96
VPS35YJL154C MAC1P35192 417 aa2.82□□□□□ -1.96
VPS35YJL154C ALY2P47029 1046 aa2.82□□□□□ -1.96
VPS35YJL154C RAI1P53063 387 aaKnown RBP2.82□□□□□ -1.96
VPS35YJL154C ENV7Q12003 364 aa2.82□□□□□ -1.96
VPS35YJL154C MDM12Q92328 271 aa2.82□□□□□ -1.96
VPS35YJL154C DAL7P21826 554 aa2.81□□□□□ -1.96
VPS35YJL154C PER1P25625 357 aa2.81□□□□□ -1.96
VPS35YJL154C YKR073CP36153 106 aa2.81□□□□□ -1.96
VPS35YJL154C ECM21P38167 1117 aaKnown RBP2.81□□□□□ -1.96
VPS35YJL154C ETP1P38748 585 aaKnown RBP2.81□□□□□ -1.96
VPS35YJL154C GYP8P43570 497 aa2.81□□□□□ -1.96
VPS35YJL154C ZDS1P50111 915 aaKnown RBP2.81□□□□□ -1.96
VPS35YJL154C PBP1P53297 722 aaKnown RBP2.81□□□□□ -1.96
VPS35YJL154C YGR283CP53336 341 aaPredicted RBP2.81□□□□□ -1.96
VPS35YJL154C PRC1P00729 532 aa2.81□□□□□ -1.96
VPS35YJL154C RPL8AP17076 256 aaKnown RBP2.81□□□□□ -1.96
VPS35YJL154C URA1P28272 314 aaPredicted RBP2.81□□□□□ -1.96
VPS35YJL154C PMT3P47190 753 aa2.81□□□□□ -1.96
VPS35YJL154C MTC3P53077 123 aa2.81□□□□□ -1.96
VPS35YJL154C YGR012WP53206 393 aa2.81□□□□□ -1.96
VPS35YJL154C YNL193WP53870 558 aa2.81□□□□□ -1.96
VPS35YJL154C RSC3Q06639 885 aa2.81□□□□□ -1.96
VPS35YJL154C DIF1O13577 133 aa2.8□□□□□ -1.96
VPS35YJL154C CYC1P00044 109 aaPredicted RBP2.8□□□□□ -1.96
VPS35YJL154C CDC9P04819 755 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 65.5 ms