RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B TY2B-OR1Q12113 1770 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B TY2B-DR1Q12472 1770 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B TY2B-OR2Q12501 1770 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B DNF1P32660 1571 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B DEF1P35732 738 aaKnown RBP2.06□□□□□ -2.08
YGR109W-BYGR109W-B KTR4P38131 464 aa2.06□□□□□ -2.08
YGR109W-BYGR109W-B HFM1P51979 1187 aa2.06□□□□□ -2.08
YGR109W-BYGR109W-B NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
YGR109W-BYGR109W-B RIB2Q12362 591 aaKnown RBP2.06□□□□□ -2.08
YGR109W-BYGR109W-B SPE1P08432 466 aa2.06□□□□□ -2.08
YGR109W-BYGR109W-B MCM2P29469 868 aa2.06□□□□□ -2.08
YGR109W-BYGR109W-B NAB3P38996 802 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
YGR109W-BYGR109W-B PLB2Q03674 706 aa2.06□□□□□ -2.08
YGR109W-BYGR109W-B TMA10Q06177 86 aa2.06□□□□□ -2.08
YGR109W-BYGR109W-B BI4P03879 638 aa2.06□□□□□ -2.08
YGR109W-BYGR109W-B EMC1P25574 760 aa2.06□□□□□ -2.08
YGR109W-BYGR109W-B RRP14P36080 434 aaKnown RBP2.06□□□□□ -2.08
YGR109W-BYGR109W-B URM1P40554 99 aaPredicted RBP2.06□□□□□ -2.08
YGR109W-BYGR109W-B GYP7P48365 746 aa2.06□□□□□ -2.08
YGR109W-BYGR109W-B EXG2P52911 562 aa2.06□□□□□ -2.08
YGR109W-BYGR109W-B YGR053CP53234 283 aa2.06□□□□□ -2.08
YGR109W-BYGR109W-B MAP1Q01662 387 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
YGR109W-BYGR109W-B MDM38Q08179 573 aa2.06□□□□□ -2.08
YGR109W-BYGR109W-B FYV10P40492 516 aa2.06□□□□□ -2.08
YGR109W-BYGR109W-B YGR012WP53206 393 aa2.06□□□□□ -2.08
YGR109W-BYGR109W-B LST4P34239 828 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B OAR1P35731 278 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B TIM44Q01852 431 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B OYE2Q03558 400 aaKnown RBP2.05□□□□□ -2.08
YGR109W-BYGR109W-B TY1B-HO13535 1793 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B TY1B-DR5P0C2I2 1755 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B TY1B-DR6P0C2I3 1755 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B TY1B-LR2P0C2I5 1755 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B TY1B-LR3P0C2I6 1755 aaKnown RBP2.05□□□□□ -2.08
YGR109W-BYGR109W-B TY1B-PR1P0C2I9 1755 aaKnown RBP2.05□□□□□ -2.08
YGR109W-BYGR109W-B TY1B-PR2P0C2J0 1756 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B TY1B-PR3P0C2J1 1755 aaKnown RBP2.05□□□□□ -2.08
YGR109W-BYGR109W-B TY1B-JR1P47098 1755 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B TY1B-ML2Q03434 1755 aaKnown RBP2.05□□□□□ -2.08
YGR109W-BYGR109W-B TY1B-ER1Q03612 1755 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B TY1B-ML1Q04711 1755 aaKnown RBP2.05□□□□□ -2.08
YGR109W-BYGR109W-B TY1B-GR2Q12269 1755 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B TY1B-OLQ12273 1755 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B TY1B-PLQ12414 1755 aaKnown RBP2.05□□□□□ -2.08
YGR109W-BYGR109W-B PRP9P19736 530 aaKnown RBP2.05□□□□□ -2.08
YGR109W-BYGR109W-B ECM21P38167 1117 aaKnown RBP2.05□□□□□ -2.08
YGR109W-BYGR109W-B MAD1P40957 749 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B NOP2P40991 618 aaKnown RBP2.05□□□□□ -2.08
YGR109W-BYGR109W-B STU2P46675 888 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B YAP6Q03935 383 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B ATE1P16639 503 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B PFK1P16861 987 aaKnown RBP2.05□□□□□ -2.08
YGR109W-BYGR109W-B CAB3P36076 571 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B CDA1Q06702 301 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B ENA1P13587 1091 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B SRM1P21827 482 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B CDC12P32468 407 aaKnown RBP2.05□□□□□ -2.08
YGR109W-BYGR109W-B GUS1P46655 708 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
YGR109W-BYGR109W-B JSN1P47135 1091 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
YGR109W-BYGR109W-B ENA2Q01896 1091 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B EEB1Q02891 456 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B VPS16Q03308 798 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B PIN2Q12057 282 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B ENA5Q12691 1091 aa2.05□□□□□ -2.08
YGR109W-BYGR109W-B DUT1P33317 147 aa2.04□□□□□ -2.08
YGR109W-BYGR109W-B PBY1P38254 753 aa2.04□□□□□ -2.08
YGR109W-BYGR109W-B SAH1P39954 449 aaKnown RBP2.04□□□□□ -2.08
YGR109W-BYGR109W-B CCM1P48237 864 aaPredicted RBP2.04□□□□□ -2.08
YGR109W-BYGR109W-B ADE8P04161 214 aa2.04□□□□□ -2.08
YGR109W-BYGR109W-B PLB1P39105 664 aa2.04□□□□□ -2.08
YGR109W-BYGR109W-B YGL176CP46945 554 aa2.04□□□□□ -2.08
YGR109W-BYGR109W-B DAS1P47005 663 aa2.04□□□□□ -2.08
YGR109W-BYGR109W-B SRT1Q03175 343 aa2.04□□□□□ -2.08
YGR109W-BYGR109W-B ATG2P53855 1592 aa2.04□□□□□ -2.08
YGR109W-BYGR109W-B CDC48P25694 835 aaKnown RBP2.04□□□□□ -2.08
YGR109W-BYGR109W-B CHS7P38843 316 aa2.03□□□□□ -2.08
YGR109W-BYGR109W-B YER158CP40095 573 aa2.03□□□□□ -2.08
YGR109W-BYGR109W-B MTC3P53077 123 aa2.03□□□□□ -2.08
YGR109W-BYGR109W-B SPR28Q04921 423 aa2.03□□□□□ -2.08
YGR109W-BYGR109W-B CDC11P32458 415 aa2.03□□□□□ -2.08
YGR109W-BYGR109W-B NGG1P32494 702 aa2.03□□□□□ -2.08
YGR109W-BYGR109W-B GIC1P38785 314 aa2.03□□□□□ -2.08
YGR109W-BYGR109W-B MXR1P40029 184 aa2.03□□□□□ -2.08
YGR109W-BYGR109W-B GTF1P53260 183 aaPredicted RBP2.03□□□□□ -2.08
YGR109W-BYGR109W-B OMS1Q06668 471 aa2.03□□□□□ -2.08
YGR109W-BYGR109W-B TY1B-DR3Q99231 1755 aa2.03□□□□□ -2.08
YGR109W-BYGR109W-B SIT1P39980 628 aa2.03□□□□□ -2.08
YGR109W-BYGR109W-B FAL1Q12099 399 aaKnown RBP2.03□□□□□ -2.08
YGR109W-BYGR109W-B MDS3P53094 1487 aa2.03□□□□□ -2.08
YGR109W-BYGR109W-B ESC1Q03661 1658 aaKnown RBP2.03□□□□□ -2.08
YGR109W-BYGR109W-B HRR25P29295 494 aaKnown RBP2.03□□□□□ -2.09
YGR109W-BYGR109W-B EFT1P32324 842 aaKnown RBP2.03□□□□□ -2.09
YGR109W-BYGR109W-B FPR3P38911 411 aaKnown RBP2.03□□□□□ -2.09
YGR109W-BYGR109W-B RAI1P53063 387 aaKnown RBP2.03□□□□□ -2.09
YGR109W-BYGR109W-B CWC24P53769 259 aa2.03□□□□□ -2.09
YGR109W-BYGR109W-B TY2B-BQ12491 1770 aa2.03□□□□□ -2.09
YGR109W-BYGR109W-B UBA2P52488 636 aa2.02□□□□□ -2.09
YGR109W-BYGR109W-B RAD53P22216 821 aa2.02□□□□□ -2.09
YGR109W-BYGR109W-B SED4P25365 1065 aa2.02□□□□□ -2.09
YGR109W-BYGR109W-B JNM1P36224 373 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms