RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W RMD1Q03441 430 aa6.64□□□□□ -1.35
RER1YCL001W RXT3Q07458 294 aa6.64□□□□□ -1.35
RER1YCL001W GNT1Q12096 491 aa6.64□□□□□ -1.35
RER1YCL001W ARO1P08566 1588 aaKnown RBP6.64□□□□□ -1.35
RER1YCL001W APL1P27351 700 aa6.63□□□□□ -1.35
RER1YCL001W GPB1Q08886 897 aa6.63□□□□□ -1.35
RER1YCL001W YBT1P32386 1661 aa6.62□□□□□ -1.35
RER1YCL001W CDC6P09119 513 aa6.62□□□□□ -1.35
RER1YCL001W PBP1P53297 722 aaKnown RBP6.62□□□□□ -1.35
RER1YCL001W ACK1Q07622 623 aaPredicted RBP6.62□□□□□ -1.35
RER1YCL001W RPL11AP0C0W9 174 aaKnown RBP6.61□□□□□ -1.35
RER1YCL001W PEP7P32609 515 aa6.61□□□□□ -1.35
RER1YCL001W MCM7P38132 845 aa6.61□□□□□ -1.35
RER1YCL001W MXR1P40029 184 aa6.61□□□□□ -1.35
RER1YCL001W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
RER1YCL001W ACM1Q08981 209 aa6.61□□□□□ -1.35
RER1YCL001W TMA46Q12000 345 aaKnown RBP6.61□□□□□ -1.35
RER1YCL001W RPL11BQ3E757 174 aaPredicted RBP6.61□□□□□ -1.35
RER1YCL001W CHC1P22137 1653 aaKnown RBP6.61□□□□□ -1.35
RER1YCL001W YSP2Q06681 1438 aa6.6□□□□□ -1.35
RER1YCL001W TUB2P02557 457 aaKnown RBP6.6□□□□□ -1.35
RER1YCL001W ASF1P32447 279 aa6.6□□□□□ -1.35
RER1YCL001W UGA2P38067 497 aa6.6□□□□□ -1.35
RER1YCL001W ACE2P21192 770 aa6.59□□□□□ -1.35
RER1YCL001W STE11P23561 717 aa6.59□□□□□ -1.35
RER1YCL001W RRT14P40470 206 aa6.59□□□□□ -1.35
RER1YCL001W VPS62P53285 467 aa6.59□□□□□ -1.35
RER1YCL001W MSC2Q03455 724 aa6.59□□□□□ -1.35
RER1YCL001W DBP2P24783 546 aaKnown RBP6.58□□□□□ -1.36
RER1YCL001W DUT1P33317 147 aa6.58□□□□□ -1.36
RER1YCL001W SLA2P33338 968 aa6.58□□□□□ -1.36
RER1YCL001W GEM1P39722 662 aa6.58□□□□□ -1.36
RER1YCL001W BI4P03879 638 aa6.57□□□□□ -1.36
RER1YCL001W LYP1P32487 611 aa6.57□□□□□ -1.36
RER1YCL001W LST4P34239 828 aa6.57□□□□□ -1.36
RER1YCL001W PNT1P38969 423 aa6.57□□□□□ -1.36
RER1YCL001W SEC7P11075 2009 aaKnown RBP6.57□□□□□ -1.36
RER1YCL001W TRP2P00899 507 aaKnown RBP6.56□□□□□ -1.36
RER1YCL001W THS1P04801 734 aaKnown RBP6.56□□□□□ -1.36
RER1YCL001W MNN10P50108 393 aaKnown RBP6.56□□□□□ -1.36
RER1YCL001W HMI1Q12039 706 aa6.56□□□□□ -1.36
RER1YCL001W YOR093CQ12275 1648 aa6.56□□□□□ -1.36
RER1YCL001W GTF1P53260 183 aaPredicted RBP6.55□□□□□ -1.36
RER1YCL001W EEB1Q02891 456 aa6.55□□□□□ -1.36
RER1YCL001W YAP6Q03935 383 aa6.55□□□□□ -1.36
RER1YCL001W TMA10Q06177 86 aa6.55□□□□□ -1.36
RER1YCL001W SPP382Q06411 708 aaPredicted RBP6.55□□□□□ -1.36
RER1YCL001W CDC34P14682 295 aa6.54□□□□□ -1.36
RER1YCL001W EMC1P25574 760 aa6.54□□□□□ -1.36
RER1YCL001W TRM2P33753 639 aa6.54□□□□□ -1.36
RER1YCL001W HFM1P51979 1187 aa6.54□□□□□ -1.36
RER1YCL001W OYE2Q03558 400 aaKnown RBP6.54□□□□□ -1.36
RER1YCL001W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
RER1YCL001W BNR1P40450 1375 aa6.54□□□□□ -1.36
RER1YCL001W HCM1P25364 564 aa6.53□□□□□ -1.36
RER1YCL001W PET112P33893 541 aa6.53□□□□□ -1.36
RER1YCL001W MCM6P53091 1017 aaKnown RBP6.53□□□□□ -1.36
RER1YCL001W YLR224WQ05947 369 aa6.53□□□□□ -1.36
RER1YCL001W PNS1Q12412 539 aa6.53□□□□□ -1.36
RER1YCL001W RKM4Q12504 494 aa6.53□□□□□ -1.36
RER1YCL001W MND2P40577 368 aa6.52□□□□□ -1.37
RER1YCL001W NOP12Q08208 459 aaKnown RBP6.52□□□□□ -1.37
RER1YCL001W PUS9Q12069 462 aa6.52□□□□□ -1.37
RER1YCL001W YPL066WQ12194 479 aa6.52□□□□□ -1.37
RER1YCL001W SRB8P25648 1427 aa6.51□□□□□ -1.37
RER1YCL001W INO1P11986 533 aa6.51□□□□□ -1.37
RER1YCL001W TYW3P53177 273 aa6.51□□□□□ -1.37
RER1YCL001W MOT2P34909 587 aaKnown RBP6.5□□□□□ -1.37
RER1YCL001W MNR2P35724 969 aa6.5□□□□□ -1.37
RER1YCL001W GCV2P49095 1034 aa6.5□□□□□ -1.37
RER1YCL001W MTC3P53077 123 aa6.5□□□□□ -1.37
RER1YCL001W NTO1Q12311 748 aa6.5□□□□□ -1.37
RER1YCL001W DNF3Q12674 1656 aa6.49□□□□□ -1.37
RER1YCL001W YAP3P38749 330 aa6.49□□□□□ -1.37
RER1YCL001W ADY3Q07732 790 aa6.49□□□□□ -1.37
RER1YCL001W TPO1Q07824 586 aa6.49□□□□□ -1.37
RER1YCL001W YKL107WP34251 309 aa6.48□□□□□ -1.37
RER1YCL001W SIP5P40210 489 aaKnown RBP6.48□□□□□ -1.37
RER1YCL001W MSE1P48525 536 aa6.48□□□□□ -1.37
RER1YCL001W PMA1P05030 918 aaKnown RBP6.47□□□□□ -1.37
RER1YCL001W PMI40P29952 429 aaKnown RBP6.47□□□□□ -1.37
RER1YCL001W DCG1P32460 244 aa6.47□□□□□ -1.37
RER1YCL001W MET12P46151 657 aa6.47□□□□□ -1.37
RER1YCL001W YGL176CP46945 554 aa6.47□□□□□ -1.37
RER1YCL001W XYL2Q07993 356 aa6.47□□□□□ -1.37
RER1YCL001W HAP1P0CE41 1502 aa6.46□□□□□ -1.37
RER1YCL001W POA1P38218 177 aa6.46□□□□□ -1.38
RER1YCL001W ZRG8P40021 1076 aa6.46□□□□□ -1.38
RER1YCL001W URN1Q06525 465 aaKnown RBP6.46□□□□□ -1.38
RER1YCL001W YLL058WQ12198 575 aa6.46□□□□□ -1.38
RER1YCL001W YAP1801P38856 637 aa6.45□□□□□ -1.38
RER1YCL001W PHO23P50947 330 aa6.45□□□□□ -1.38
RER1YCL001W SPO20Q04359 397 aa6.45□□□□□ -1.38
RER1YCL001W OSW2Q12202 724 aa6.45□□□□□ -1.38
RER1YCL001W HIS5P07172 385 aa6.44□□□□□ -1.38
RER1YCL001W YKL151CP36059 337 aa6.44□□□□□ -1.38
RER1YCL001W PLB1P39105 664 aa6.44□□□□□ -1.38
RER1YCL001W SUN4P53616 420 aa6.44□□□□□ -1.38
RER1YCL001W RPP2AP05319 106 aaKnown RBP6.43□□□□□ -1.38
RER1YCL001W ENA1P13587 1091 aa6.43□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms