RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W FUN30P31380 1131 aa6.33□□□□□ -1.4
CKS1YBR135W REC104P33323 182 aa6.33□□□□□ -1.4
CKS1YBR135W YER158CP40095 573 aa6.33□□□□□ -1.4
CKS1YBR135W RSB1Q08417 382 aa6.33□□□□□ -1.4
CKS1YBR135W TRE1Q08919 783 aa6.33□□□□□ -1.4
CKS1YBR135W ADR1P07248 1323 aa6.32□□□□□ -1.4
CKS1YBR135W CHS2P14180 963 aa6.32□□□□□ -1.4
CKS1YBR135W GRX4P32642 244 aa6.32□□□□□ -1.4
CKS1YBR135W SPC29P33419 253 aa6.32□□□□□ -1.4
CKS1YBR135W UBP12P39538 1254 aa6.32□□□□□ -1.4
CKS1YBR135W YKE2P52553 114 aa6.32□□□□□ -1.4
CKS1YBR135W PHR1P05066 565 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
CKS1YBR135W GSY1P23337 708 aa6.31□□□□□ -1.4
CKS1YBR135W SFP1P32432 683 aa6.31□□□□□ -1.4
CKS1YBR135W EMC3P36039 253 aa6.31□□□□□ -1.4
CKS1YBR135W CRP1P38845 465 aaKnown RBP6.31□□□□□ -1.4
CKS1YBR135W DSS1P39112 969 aa6.31□□□□□ -1.4
CKS1YBR135W GYP8P43570 497 aa6.31□□□□□ -1.4
CKS1YBR135W HFM1P51979 1187 aa6.31□□□□□ -1.4
CKS1YBR135W YGR283CP53336 341 aaPredicted RBP6.31□□□□□ -1.4
CKS1YBR135W ENV7Q12003 364 aa6.31□□□□□ -1.4
CKS1YBR135W SVS1Q12254 260 aa6.31□□□□□ -1.4
CKS1YBR135W CDC48P25694 835 aaKnown RBP6.3□□□□□ -1.4
CKS1YBR135W PTC7P38797 343 aa6.3□□□□□ -1.4
CKS1YBR135W ZDS1P50111 915 aaKnown RBP6.3□□□□□ -1.4
CKS1YBR135W YNR029CP53729 429 aaKnown RBP6.3□□□□□ -1.4
CKS1YBR135W SDH1Q00711 640 aa6.3□□□□□ -1.4
CKS1YBR135W NSI1Q12457 570 aa6.3□□□□□ -1.4
CKS1YBR135W VBA3P25594 458 aa6.29□□□□□ -1.4
CKS1YBR135W AIM26P32858 118 aa6.29□□□□□ -1.4
CKS1YBR135W KAE1P36132 386 aa6.29□□□□□ -1.4
CKS1YBR135W GTS1P40956 396 aa6.29□□□□□ -1.4
CKS1YBR135W SFB2P53953 876 aa6.29□□□□□ -1.4
CKS1YBR135W YLR001CQ07895 862 aa6.29□□□□□ -1.4
CKS1YBR135W GCD1P09032 578 aaPredicted RBP6.28□□□□□ -1.4
CKS1YBR135W RPC82P32349 654 aa6.28□□□□□ -1.4
CKS1YBR135W TY4A-JP47023 414 aa6.28□□□□□ -1.4
CKS1YBR135W DAM1P53267 343 aa6.28□□□□□ -1.4
CKS1YBR135W YNL193WP53870 558 aa6.28□□□□□ -1.4
CKS1YBR135W ATP25Q03153 612 aa6.28□□□□□ -1.4
CKS1YBR135W XYL2Q07993 356 aa6.28□□□□□ -1.4
CKS1YBR135W OSW2Q12202 724 aa6.28□□□□□ -1.4
CKS1YBR135W CDC9P04819 755 aa6.27□□□□□ -1.41
CKS1YBR135W SPS1P08458 490 aa6.27□□□□□ -1.41
CKS1YBR135W ABZ1P37254 787 aaPredicted RBP6.27□□□□□ -1.41
CKS1YBR135W YAP1801P38856 637 aa6.27□□□□□ -1.41
CKS1YBR135W SEC26P41810 973 aaKnown RBP6.27□□□□□ -1.41
CKS1YBR135W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
CKS1YBR135W SSY1Q03770 852 aa6.27□□□□□ -1.41
CKS1YBR135W SSB1P11484 613 aaKnown RBP6.26□□□□□ -1.41
CKS1YBR135W MTC2P34246 357 aa6.26□□□□□ -1.41
CKS1YBR135W RFC5P38251 354 aa6.26□□□□□ -1.41
CKS1YBR135W SSB2P40150 613 aaKnown RBP6.26□□□□□ -1.41
CKS1YBR135W NIT3P49954 291 aa6.26□□□□□ -1.41
CKS1YBR135W YGR130CP53278 816 aa6.26□□□□□ -1.41
CKS1YBR135W MET7Q08645 548 aa6.26□□□□□ -1.41
CKS1YBR135W RIB2Q12362 591 aaKnown RBP6.26□□□□□ -1.41
CKS1YBR135W SRD1P09007 221 aa6.25□□□□□ -1.41
CKS1YBR135W MPH2P0CD99 609 aa6.25□□□□□ -1.41
CKS1YBR135W ADP1P25371 1049 aa6.25□□□□□ -1.41
CKS1YBR135W ECM21P38167 1117 aaKnown RBP6.25□□□□□ -1.41
CKS1YBR135W YEN1P40028 759 aa6.25□□□□□ -1.41
CKS1YBR135W HLJ1P48353 224 aa6.25□□□□□ -1.41
CKS1YBR135W YPR196WQ06595 470 aa6.25□□□□□ -1.41
CKS1YBR135W LPX1Q12405 387 aaKnown RBP6.25□□□□□ -1.41
CKS1YBR135W SIZ1Q04195 904 aa6.24□□□□□ -1.41
CKS1YBR135W RSC3Q06639 885 aa6.24□□□□□ -1.41
CKS1YBR135W CYC7P00045 113 aa6.23□□□□□ -1.41
CKS1YBR135W STO1P34160 861 aaKnown RBP6.23□□□□□ -1.41
CKS1YBR135W YEL1P34225 687 aa6.23□□□□□ -1.41
CKS1YBR135W CAF16P43569 289 aa6.23□□□□□ -1.41
CKS1YBR135W CCT8P47079 568 aaKnown RBP6.23□□□□□ -1.41
CKS1YBR135W YDR514CQ04408 483 aa6.23□□□□□ -1.41
CKS1YBR135W REH1Q06709 432 aa6.23□□□□□ -1.41
CKS1YBR135W KIN2P13186 1147 aaKnown RBP6.22□□□□□ -1.41
CKS1YBR135W APL1P27351 700 aa6.22□□□□□ -1.41
CKS1YBR135W MGS1P40151 587 aa6.22□□□□□ -1.41
CKS1YBR135W PMT3P47190 753 aa6.22□□□□□ -1.41
CKS1YBR135W ENV11P53246 860 aa6.22□□□□□ -1.41
CKS1YBR135W MSC2Q03455 724 aa6.22□□□□□ -1.41
CKS1YBR135W SPT6P23615 1451 aaKnown RBP6.22□□□□□ -1.41
CKS1YBR135W TRP3P00937 484 aa6.21□□□□□ -1.42
CKS1YBR135W RAD18P10862 487 aa6.21□□□□□ -1.42
CKS1YBR135W PCL2P25693 308 aa6.21□□□□□ -1.42
CKS1YBR135W TOM20P35180 183 aa6.21□□□□□ -1.42
CKS1YBR135W MCD4P36051 919 aa6.21□□□□□ -1.42
CKS1YBR135W YKR073CP36153 106 aa6.21□□□□□ -1.42
CKS1YBR135W SDA1P53313 767 aaKnown RBP6.21□□□□□ -1.42
CKS1YBR135W NRD1P53617 575 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
CKS1YBR135W ORC3P54790 616 aa6.21□□□□□ -1.42
CKS1YBR135W RSM24Q03976 319 aa6.21□□□□□ -1.42
CKS1YBR135W THI73Q07904 523 aa6.21□□□□□ -1.42
CKS1YBR135W NUP145P49687 1317 aa6.21□□□□□ -1.42
CKS1YBR135W SPA2P23201 1466 aaKnown RBP6.21□□□□□ -1.42
CKS1YBR135W HSL1P34244 1518 aa6.2□□□□□ -1.42
CKS1YBR135W NOT3P06102 836 aaKnown RBP6.2□□□□□ -1.42
CKS1YBR135W RFA1P22336 621 aaKnown RBP6.2□□□□□ -1.42
CKS1YBR135W PER1P25625 357 aa6.2□□□□□ -1.42
CKS1YBR135W URA1P28272 314 aaPredicted RBP6.2□□□□□ -1.42
CKS1YBR135W NOG2P53742 486 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms