RNA–Protein interactions for RNA: ENST00000641339.1

RGPD1-205, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

Gene RGPD1, Length 562 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-205ENST00000641339 SETDB2Q96T68 719 aa21.5■■□□□ 1.03
RGPD1-205ENST00000641339 NRXN2Q9P2S2 1712 aa21.49■■□□□ 1.03
RGPD1-205ENST00000641339 ERVV-1B6SEH8 477 aa21.49■■□□□ 1.03
RGPD1-205ENST00000641339 ANXA1P04083 346 aa21.49■■□□□ 1.03
RGPD1-205ENST00000641339 HOXB7P09629 217 aa21.49■■□□□ 1.03
RGPD1-205ENST00000641339 DUSP27Q5VZP5 1158 aa21.49■■□□□ 1.03
RGPD1-205ENST00000641339 ZNF652Q9Y2D9 606 aa21.48■■□□□ 1.03
RGPD1-205ENST00000641339 MAP3K15Q6ZN16 1313 aa21.48■■□□□ 1.03
RGPD1-205ENST00000641339 BCORQ6W2J9 1755 aa21.48■■□□□ 1.03
RGPD1-205ENST00000641339 CARMIL3Q8ND23 1372 aa21.48■■□□□ 1.03
RGPD1-205ENST00000641339 GRIN3BO60391 1043 aa21.47■■□□□ 1.03
RGPD1-205ENST00000641339 CHRNA5P30532 468 aa21.47■■□□□ 1.03
RGPD1-205ENST00000641339 PRR5LQ6MZQ0 368 aa21.47■■□□□ 1.03
RGPD1-205ENST00000641339 SALL2Q9Y467 1007 aaPredicted RBP21.47■■□□□ 1.03
RGPD1-205ENST00000641339 AFDNP55196 1824 aaKnown RBP21.46■■□□□ 1.03
RGPD1-205ENST00000641339 C8orf58Q8NAV2 365 aa21.46■■□□□ 1.03
RGPD1-205ENST00000641339 DDX21Q9NR30 783 aaKnown RBP eCLIP21.46■■□□□ 1.03
RGPD1-205ENST00000641339 HDGFL1Q5TGJ6 251 aa21.45■■□□□ 1.02
RGPD1-205ENST00000641339 CCDC24Q8N4L8 307 aa21.45■■□□□ 1.02
RGPD1-205ENST00000641339 ZBTB3Q9H5J0 574 aa21.45■■□□□ 1.02
RGPD1-205ENST00000641339 NIP7Q9Y221 180 aaKnown RBP eCLIP21.45■■□□□ 1.02
RGPD1-205ENST00000641339 IL16Q14005 1332 aa21.45■■□□□ 1.02
RGPD1-205ENST00000641339 N4BP2Q86UW6 1770 aaPredicted RBP21.45■■□□□ 1.02
RGPD1-205ENST00000641339 ELL2O00472 640 aaPredicted RBP21.44■■□□□ 1.02
RGPD1-205ENST00000641339 KIF6Q6ZMV9 814 aa21.44■■□□□ 1.02
RGPD1-205ENST00000641339 COPS6Q7L5N1 327 aa21.44■■□□□ 1.02
RGPD1-205ENST00000641339 TSR2Q969E8 191 aaKnown RBP21.44■■□□□ 1.02
RGPD1-205ENST00000641339 BRIP1Q9BX63 1249 aa21.44■■□□□ 1.02
RGPD1-205ENST00000641339 CHPF2Q9P2E5 772 aa21.44■■□□□ 1.02
RGPD1-205ENST00000641339 GIGYF2Q6Y7W6 1299 aaKnown RBP21.43■■□□□ 1.02
RGPD1-205ENST00000641339 WDR63Q8IWG1 891 aa21.43■■□□□ 1.02
RGPD1-205ENST00000641339 TSPYL6Q8N831 410 aa21.43■■□□□ 1.02
RGPD1-205ENST00000641339 PIM2Q9P1W9 311 aa21.43■■□□□ 1.02
RGPD1-205ENST00000641339 BCS1LQ9Y276 419 aa21.43■■□□□ 1.02
RGPD1-205ENST00000641339 CCER2I3L3R5 266 aa21.42■■□□□ 1.02
RGPD1-205ENST00000641339 CNBD1Q8NA66 436 aa21.42■■□□□ 1.02
RGPD1-205ENST00000641339 XAGE3Q8WTP9 111 aa21.42■■□□□ 1.02
RGPD1-205ENST00000641339 NBPF5PQ86XG9 351 aaPredicted RBP21.41■■□□□ 1.02
RGPD1-205ENST00000641339 ZNF34Q8IZ26 560 aa21.41■■□□□ 1.02
RGPD1-205ENST00000641339 DBF4Q9UBU7 674 aaPredicted RBP21.41■■□□□ 1.02
RGPD1-205ENST00000641339 ATP10DQ9P241 1426 aa21.4■■□□□ 1.02
RGPD1-205ENST00000641339 UBN2Q6ZU65 1347 aa21.4■■□□□ 1.02
RGPD1-205ENST00000641339 AIMP1Q12904 312 aaKnown RBP21.4■■□□□ 1.02
RGPD1-205ENST00000641339 TPTE2Q6XPS3 522 aa21.4■■□□□ 1.02
RGPD1-205ENST00000641339 C2CD5Q86YS7 1000 aa21.4■■□□□ 1.02
RGPD1-205ENST00000641339 SPINK5Q9NQ38 1064 aaPredicted RBP21.4■■□□□ 1.02
RGPD1-205ENST00000641339 PDE6BP35913 854 aa21.39■■□□□ 1.01
RGPD1-205ENST00000641339 FAM177BA6PVY3 158 aa21.38■■□□□ 1.01
RGPD1-205ENST00000641339 H0YIN7 160 aa21.38■■□□□ 1.01
RGPD1-205ENST00000641339 GPTP24298 496 aa21.38■■□□□ 1.01
RGPD1-205ENST00000641339 C1QTNF8P60827 252 aa21.38■■□□□ 1.01
RGPD1-205ENST00000641339 DALRD3Q5D0E6 543 aaKnown RBP21.38■■□□□ 1.01
RGPD1-205ENST00000641339 ST5P78524 1137 aa21.37■■□□□ 1.01
RGPD1-205ENST00000641339 SUSD4Q5VX71 490 aa21.37■■□□□ 1.01
RGPD1-205ENST00000641339 DIEXFQ68CQ4 756 aaKnown RBP21.37■■□□□ 1.01
RGPD1-205ENST00000641339 HYPKQ9NX55 129 aa21.37■■□□□ 1.01
RGPD1-205ENST00000641339 BRCA1P38398 1863 aaKnown RBP21.37■■□□□ 1.01
RGPD1-205ENST00000641339 ZNF521Q96K83 1311 aa21.36■■□□□ 1.01
RGPD1-205ENST00000641339 FANCIQ9NVI1 1328 aa21.36■■□□□ 1.01
RGPD1-205ENST00000641339 KLRG2A4D1S0 409 aaPredicted RBP21.36■■□□□ 1.01
RGPD1-205ENST00000641339 NPHP1O15259 732 aa21.36■■□□□ 1.01
RGPD1-205ENST00000641339 PDZRN3Q9UPQ7 1066 aa21.36■■□□□ 1.01
RGPD1-205ENST00000641339 ANKRD31Q8N7Z5 1873 aa21.35■■□□□ 1.01
RGPD1-205ENST00000641339 NUP98P52948 1817 aa21.35■■□□□ 1.01
RGPD1-205ENST00000641339 ANKRD13DQ6ZTN6 518 aa21.35■■□□□ 1.01
RGPD1-205ENST00000641339 PHAXQ9H814 394 aaKnown RBP21.35■■□□□ 1.01
RGPD1-205ENST00000641339 SRGNP10124 158 aa21.34■■□□□ 1.01
RGPD1-205ENST00000641339 TCIRG1Q13488 830 aa21.34■■□□□ 1.01
RGPD1-205ENST00000641339 TWISTNBQ3B726 338 aaPredicted RBP21.34■■□□□ 1.01
RGPD1-205ENST00000641339 CCDC30Q5VVM6 783 aa21.34■■□□□ 1.01
RGPD1-205ENST00000641339 NUTM1Q86Y26 1132 aa21.34■■□□□ 1.01
RGPD1-205ENST00000641339 MIER1Q8N108 512 aa21.34■■□□□ 1.01
RGPD1-205ENST00000641339 TTLL6Q8N841 843 aa21.34■■□□□ 1.01
RGPD1-205ENST00000641339 PLBD2Q8NHP8 589 aa21.34■■□□□ 1.01
RGPD1-205ENST00000641339 NYXQ9GZU5 481 aa21.34■■□□□ 1.01
RGPD1-205ENST00000641339 NTSR2O95665 410 aa21.33■■□□□ 1.01
RGPD1-205ENST00000641339 ERFEQ4G0M1 354 aa21.33■■□□□ 1.01
RGPD1-205ENST00000641339 ARHGAP27Q6ZUM4 889 aa21.33■■□□□ 1.01
RGPD1-205ENST00000641339 PARP10Q53GL7 1025 aa21.32■■□□□ 1
RGPD1-205ENST00000641339 ZNF526Q8TF50 670 aaPredicted RBP21.32■■□□□ 1
RGPD1-205ENST00000641339 ZNF622Q969S3 477 aaKnown RBP eCLIP21.32■■□□□ 1
RGPD1-205ENST00000641339 IBTKQ9P2D0 1353 aaPredicted RBP21.32■■□□□ 1
RGPD1-205ENST00000641339 VAMP4O75379 141 aa21.31■■□□□ 1
RGPD1-205ENST00000641339 GTF2E1P29083 439 aaPredicted RBP21.31■■□□□ 1
RGPD1-205ENST00000641339 HSP90AB3PQ58FF7 597 aa21.31■■□□□ 1
RGPD1-205ENST00000641339 STYK1Q6J9G0 422 aa21.31■■□□□ 1
RGPD1-205ENST00000641339 NLRP10Q86W26 655 aa21.31■■□□□ 1
RGPD1-205ENST00000641339 CHMP4AQ9BY43 222 aa21.31■■□□□ 1
RGPD1-205ENST00000641339 ABCC12Q96J65 1359 aa21.31■■□□□ 1
RGPD1-205ENST00000641339 EXOSC9Q06265 439 aaKnown RBP21.3■■□□□ 1
RGPD1-205ENST00000641339 GOLGA2Q08379 1002 aa21.3■■□□□ 1
RGPD1-205ENST00000641339 PPP1R42Q7Z4L9 355 aa21.3■■□□□ 1
RGPD1-205ENST00000641339 MASTLQ96GX5 879 aa21.3■■□□□ 1
RGPD1-205ENST00000641339 DLEC1Q9Y238 1755 aa21.29■■□□□ 1
RGPD1-205ENST00000641339 TCERG1O14776 1098 aaKnown RBP21.29■■□□□ 1
RGPD1-205ENST00000641339 ISCA1Q9BUE6 129 aa21.29■■□□□ 1
RGPD1-205ENST00000641339 UTP14AQ9BVJ6 771 aaKnown RBP21.29■■□□□ 1
RGPD1-205ENST00000641339 CRY2Q49AN0 593 aa21.28■■□□□ 1
RGPD1-205ENST00000641339 SLC10A5Q5PT55 438 aa21.28■■□□□ 1
RGPD1-205ENST00000641339 MYH16Q9H6N6 1097 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms