RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 ABCC4O15439 1325 aa11.64□□□□□ -0.55
SCARB2-225ENST00000640900 ERVV-1B6SEH8 477 aa11.64□□□□□ -0.55
SCARB2-225ENST00000640900 IPO8O15397 1037 aaKnown RBP11.64□□□□□ -0.55
SCARB2-225ENST00000640900 MYL6BP14649 208 aa11.64□□□□□ -0.55
SCARB2-225ENST00000640900 SSFA2P28290 1259 aa11.64□□□□□ -0.55
SCARB2-225ENST00000640900 PDE3AQ14432 1141 aa11.64□□□□□ -0.55
SCARB2-225ENST00000640900 ZKSCAN2Q63HK3 967 aa11.64□□□□□ -0.55
SCARB2-225ENST00000640900 TTLL7Q6ZT98 887 aa11.64□□□□□ -0.55
SCARB2-225ENST00000640900 PLBD2Q8NHP8 589 aa11.64□□□□□ -0.55
SCARB2-225ENST00000640900 ANO8Q9HCE9 1232 aaPredicted RBP11.64□□□□□ -0.55
SCARB2-225ENST00000640900 SUPT16HQ9Y5B9 1047 aaKnown RBP11.64□□□□□ -0.55
SCARB2-225ENST00000640900 TUBGCP6Q96RT7 1819 aa11.64□□□□□ -0.55
SCARB2-225ENST00000640900 COL15A1P39059 1388 aa11.64□□□□□ -0.55
SCARB2-225ENST00000640900 N4BP2Q86UW6 1770 aaPredicted RBP11.64□□□□□ -0.55
SCARB2-225ENST00000640900 PXDNLA1KZ92 1463 aa11.63□□□□□ -0.55
SCARB2-225ENST00000640900 ATP10DQ9P241 1426 aa11.63□□□□□ -0.55
SCARB2-225ENST00000640900 A0A087WZG4 1122 aa11.63□□□□□ -0.55
SCARB2-225ENST00000640900 CAMTA2O94983 1202 aa11.63□□□□□ -0.55
SCARB2-225ENST00000640900 CANXP27824 592 aaKnown RBP11.63□□□□□ -0.55
SCARB2-225ENST00000640900 KSR2Q6VAB6 950 aa11.63□□□□□ -0.55
SCARB2-225ENST00000640900 ANKRD13DQ6ZTN6 518 aa11.63□□□□□ -0.55
SCARB2-225ENST00000640900 API5Q9BZZ5 524 aaKnown RBP11.63□□□□□ -0.55
SCARB2-225ENST00000640900 RTCBQ9Y3I0 505 aaKnown RBP11.63□□□□□ -0.55
SCARB2-225ENST00000640900 MAP3K15Q6ZN16 1313 aa11.62□□□□□ -0.55
SCARB2-225ENST00000640900 BCORQ6W2J9 1755 aa11.62□□□□□ -0.55
SCARB2-225ENST00000640900 PI4KAP2A4QPH2 592 aa11.62□□□□□ -0.55
SCARB2-225ENST00000640900 GNPATO15228 680 aa11.62□□□□□ -0.55
SCARB2-225ENST00000640900 RLBP1P12271 317 aa11.62□□□□□ -0.55
SCARB2-225ENST00000640900 TRIM28Q13263 835 aaKnown RBP11.62□□□□□ -0.55
SCARB2-225ENST00000640900 SLC15A2Q16348 729 aa11.62□□□□□ -0.55
SCARB2-225ENST00000640900 INTS3Q68E01 1043 aaKnown RBP11.62□□□□□ -0.55
SCARB2-225ENST00000640900 PI4KAP1Q8N8J0 262 aa11.62□□□□□ -0.55
SCARB2-225ENST00000640900 ARHGEF1Q92888 912 aaKnown RBP11.62□□□□□ -0.55
SCARB2-225ENST00000640900 AK7Q96M32 723 aa11.62□□□□□ -0.55
SCARB2-225ENST00000640900 BCL2L12Q9HB09 334 aa11.62□□□□□ -0.55
SCARB2-225ENST00000640900 NARFQ9UHQ1 456 aa11.62□□□□□ -0.55
SCARB2-225ENST00000640900 TNNQ9UQP3 1299 aa11.62□□□□□ -0.55
SCARB2-225ENST00000640900 C4AP0C0L4 1744 aa11.62□□□□□ -0.55
SCARB2-225ENST00000640900 SCN7AQ01118 1682 aa11.62□□□□□ -0.55
SCARB2-225ENST00000640900 ARFGEF2Q9Y6D5 1785 aa11.62□□□□□ -0.55
SCARB2-225ENST00000640900 USP42Q9H9J4 1324 aaKnown RBP11.61□□□□□ -0.55
SCARB2-225ENST00000640900 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.61□□□□□ -0.55
SCARB2-225ENST00000640900 PLIN1O60240 522 aa11.61□□□□□ -0.55
SCARB2-225ENST00000640900 FKBP5Q13451 457 aaPredicted RBP11.61□□□□□ -0.55
SCARB2-225ENST00000640900 BEND3Q5T5X7 828 aa11.61□□□□□ -0.55
SCARB2-225ENST00000640900 C20orf194Q5TEA3 1177 aa11.61□□□□□ -0.55
SCARB2-225ENST00000640900 CLEC4GQ6UXB4 293 aa11.61□□□□□ -0.55
SCARB2-225ENST00000640900 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.61□□□□□ -0.55
SCARB2-225ENST00000640900 METTL22Q9BUU2 404 aaPredicted RBP11.61□□□□□ -0.55
SCARB2-225ENST00000640900 PNPLA7Q6ZV29 1317 aa11.6□□□□□ -0.55
SCARB2-225ENST00000640900 F6X3S4 739 aa11.6□□□□□ -0.55
SCARB2-225ENST00000640900 DDX58O95786 925 aaKnown RBP11.6□□□□□ -0.55
SCARB2-225ENST00000640900 MS4A1P11836 297 aa11.6□□□□□ -0.55
SCARB2-225ENST00000640900 TCIRG1Q13488 830 aa11.6□□□□□ -0.55
SCARB2-225ENST00000640900 TRAPPC3LQ5T215 181 aa11.6□□□□□ -0.55
SCARB2-225ENST00000640900 GIGYF2Q6Y7W6 1299 aaKnown RBP11.6□□□□□ -0.55
SCARB2-225ENST00000640900 SMIM5Q71RC9 77 aa11.6□□□□□ -0.55
SCARB2-225ENST00000640900 DZIP3Q86Y13 1208 aaKnown RBP11.6□□□□□ -0.55
SCARB2-225ENST00000640900 DZIP1LQ8IYY4 767 aaKnown RBP11.6□□□□□ -0.55
SCARB2-225ENST00000640900 FLAD1Q8NFF5 587 aa11.6□□□□□ -0.55
SCARB2-225ENST00000640900 DNAAF4Q8WXU2 420 aa11.6□□□□□ -0.55
SCARB2-225ENST00000640900 ISCA1Q9BUE6 129 aa11.6□□□□□ -0.55
SCARB2-225ENST00000640900 MAP3K2Q9Y2U5 619 aa11.6□□□□□ -0.55
SCARB2-225ENST00000640900 NUP98P52948 1817 aa11.59□□□□□ -0.55
SCARB2-225ENST00000640900 IGKV5-2P06315 115 aa11.59□□□□□ -0.55
SCARB2-225ENST00000640900 AIMP1Q12904 312 aaKnown RBP11.59□□□□□ -0.55
SCARB2-225ENST00000640900 HLFQ16534 295 aa11.59□□□□□ -0.55
SCARB2-225ENST00000640900 COL23A1Q86Y22 540 aaPredicted RBP11.59□□□□□ -0.55
SCARB2-225ENST00000640900 ZNF34Q8IZ26 560 aa11.59□□□□□ -0.55
SCARB2-225ENST00000640900 FRAT1Q92837 279 aaPredicted RBP11.59□□□□□ -0.55
SCARB2-225ENST00000640900 TBC1D2BQ9UPU7 963 aa11.59□□□□□ -0.55
SCARB2-225ENST00000640900 ALDH1L1O75891 902 aa11.58□□□□□ -0.56
SCARB2-225ENST00000640900 KIF6Q6ZMV9 814 aa11.58□□□□□ -0.56
SCARB2-225ENST00000640900 LINS1Q8NG48 757 aa11.58□□□□□ -0.56
SCARB2-225ENST00000640900 PANK1Q8TE04 598 aa11.58□□□□□ -0.56
SCARB2-225ENST00000640900 TFCP2L1Q9NZI6 479 aa11.58□□□□□ -0.56
SCARB2-225ENST00000640900 ANKRD36CQ5JPF3 1778 aa11.58□□□□□ -0.56
SCARB2-225ENST00000640900 UTYO14607 1347 aa11.58□□□□□ -0.56
SCARB2-225ENST00000640900 COL24A1Q17RW2 1714 aa11.57□□□□□ -0.56
SCARB2-225ENST00000640900 NEURL1BA8MQ27 555 aa11.57□□□□□ -0.56
SCARB2-225ENST00000640900 GYS1P13807 737 aa11.57□□□□□ -0.56
SCARB2-225ENST00000640900 CCT4P50991 539 aaKnown RBP11.57□□□□□ -0.56
SCARB2-225ENST00000640900 HSP90AB3PQ58FF7 597 aa11.57□□□□□ -0.56
SCARB2-225ENST00000640900 RIC3Q7Z5B4 369 aa11.57□□□□□ -0.56
SCARB2-225ENST00000640900 TMEM57Q8N5G2 664 aa11.57□□□□□ -0.56
SCARB2-225ENST00000640900 ZBTB3Q9H5J0 574 aa11.57□□□□□ -0.56
SCARB2-225ENST00000640900 STK32BQ9NY57 414 aa11.57□□□□□ -0.56
SCARB2-225ENST00000640900 SRP68Q9UHB9 627 aaKnown RBP11.57□□□□□ -0.56
SCARB2-225ENST00000640900 CASZ1Q86V15 1759 aa11.56□□□□□ -0.56
SCARB2-225ENST00000640900 ZBTB7BO15156 539 aaPredicted RBP11.56□□□□□ -0.56
SCARB2-225ENST00000640900 TM4SF1P30408 202 aa11.56□□□□□ -0.56
SCARB2-225ENST00000640900 RFC4P35249 363 aa11.56□□□□□ -0.56
SCARB2-225ENST00000640900 CASP7P55210 303 aa11.56□□□□□ -0.56
SCARB2-225ENST00000640900 MVPQ14764 893 aaKnown RBP11.56□□□□□ -0.56
SCARB2-225ENST00000640900 CCDC191Q8NCU4 936 aa11.56□□□□□ -0.56
SCARB2-225ENST00000640900 USP44Q9H0E7 712 aa11.56□□□□□ -0.56
SCARB2-225ENST00000640900 UBN2Q6ZU65 1347 aa11.56□□□□□ -0.56
SCARB2-225ENST00000640900 ZPR1O75312 459 aa11.55□□□□□ -0.56
SCARB2-225ENST00000640900 FKBP8Q14318 412 aa11.55□□□□□ -0.56
SCARB2-225ENST00000640900 USPL1Q5W0Q7 1092 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms