RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 UTP14CQ5TAP6 766 aaKnown RBP16.4■□□□□ 0.22
PAX6-280ENST00000640872 CNTROBQ8N137 903 aa16.4■□□□□ 0.22
PAX6-280ENST00000640872 HYPKQ9NX55 129 aa16.4■□□□□ 0.22
PAX6-280ENST00000640872 NUTM2GQ5VZR2 741 aa16.39■□□□□ 0.21
PAX6-280ENST00000640872 NGDNQ8NEJ9 315 aaKnown RBP16.39■□□□□ 0.21
PAX6-280ENST00000640872 PYCARDQ9ULZ3 195 aa16.39■□□□□ 0.21
PAX6-280ENST00000640872 RGPD8O14715 1765 aaPredicted RBP16.39■□□□□ 0.21
PAX6-280ENST00000640872 MAP3K5Q99683 1374 aa16.39■□□□□ 0.21
PAX6-280ENST00000640872 TPM3P06753 285 aa16.38■□□□□ 0.21
PAX6-280ENST00000640872 ZSCAN20P17040 1043 aaPredicted RBP16.38■□□□□ 0.21
PAX6-280ENST00000640872 DNM1Q05193 864 aaKnown RBP16.38■□□□□ 0.21
PAX6-280ENST00000640872 DMTNQ08495 405 aa16.38■□□□□ 0.21
PAX6-280ENST00000640872 BCL2L12Q9HB09 334 aa16.38■□□□□ 0.21
PAX6-280ENST00000640872 CPA1P15085 419 aa16.38■□□□□ 0.21
PAX6-280ENST00000640872 GJB2P29033 226 aa16.38■□□□□ 0.21
PAX6-280ENST00000640872 KIF1BPQ96EK5 621 aa16.38■□□□□ 0.21
PAX6-280ENST00000640872 USP42Q9H9J4 1324 aaKnown RBP16.38■□□□□ 0.21
PAX6-280ENST00000640872 CASTP20810 708 aaKnown RBP16.37■□□□□ 0.21
PAX6-280ENST00000640872 GNAT3A8MTJ3 354 aa16.37■□□□□ 0.21
PAX6-280ENST00000640872 CWC27Q6UX04 472 aaKnown RBP16.37■□□□□ 0.21
PAX6-280ENST00000640872 CCDC83Q8IWF9 413 aa16.37■□□□□ 0.21
PAX6-280ENST00000640872 SPG7Q9UQ90 795 aa16.37■□□□□ 0.21
PAX6-280ENST00000640872 TTC21AQ8NDW8 1320 aa16.37■□□□□ 0.21
PAX6-280ENST00000640872 FAM177BA6PVY3 158 aa16.36■□□□□ 0.21
PAX6-280ENST00000640872 ST3GAL1Q11201 340 aa16.36■□□□□ 0.21
PAX6-280ENST00000640872 VPS53Q5VIR6 699 aa16.36■□□□□ 0.21
PAX6-280ENST00000640872 DIP2AQ14689 1571 aa16.36■□□□□ 0.21
PAX6-280ENST00000640872 PLCB2Q00722 1185 aa16.36■□□□□ 0.21
PAX6-280ENST00000640872 KCNB2Q92953 911 aa16.36■□□□□ 0.21
PAX6-280ENST00000640872 BABAM1Q9NWV8 329 aa16.36■□□□□ 0.21
PAX6-280ENST00000640872 SRGAP3O43295 1099 aa16.35■□□□□ 0.21
PAX6-280ENST00000640872 ZSCAN31Q96LW9 406 aaPredicted RBP16.35■□□□□ 0.21
PAX6-280ENST00000640872 PHAXQ9H814 394 aaKnown RBP16.35■□□□□ 0.21
PAX6-280ENST00000640872 SH2B1Q9NRF2 756 aaPredicted RBP16.35■□□□□ 0.21
PAX6-280ENST00000640872 DIAPH3Q9NSV4 1193 aa16.35■□□□□ 0.21
PAX6-280ENST00000640872 CCDC192P0DO97 292 aa16.35■□□□□ 0.21
PAX6-280ENST00000640872 ATP2B3Q16720 1220 aa16.35■□□□□ 0.21
PAX6-280ENST00000640872 PPP4R3BQ5MIZ7 849 aa16.35■□□□□ 0.21
PAX6-280ENST00000640872 IL17REQ8NFR9 667 aa16.35■□□□□ 0.21
PAX6-280ENST00000640872 TM6SF1Q9BZW5 370 aa16.35■□□□□ 0.21
PAX6-280ENST00000640872 PDRG1Q9NUG6 133 aa16.35■□□□□ 0.21
PAX6-280ENST00000640872 NWD1Q149M9 1564 aa16.34■□□□□ 0.21
PAX6-280ENST00000640872 RIOK3O14730 519 aaKnown RBP16.34■□□□□ 0.21
PAX6-280ENST00000640872 ADCK5Q3MIX3 580 aa16.34■□□□□ 0.21
PAX6-280ENST00000640872 ZSWIM6Q9HCJ5 1215 aa16.34■□□□□ 0.21
PAX6-280ENST00000640872 CHD2O14647 1828 aaKnown RBP16.34■□□□□ 0.21
PAX6-280ENST00000640872 TTC41PQ6P2S7 1318 aa16.34■□□□□ 0.21
PAX6-280ENST00000640872 GOLGA6L6A8MZA4 724 aa16.34■□□□□ 0.21
PAX6-280ENST00000640872 PTH1RQ03431 593 aa16.34■□□□□ 0.21
PAX6-280ENST00000640872 ANKRD7Q92527 254 aa16.34■□□□□ 0.21
PAX6-280ENST00000640872 CTIFO43310 598 aaKnown RBP16.33■□□□□ 0.2
PAX6-280ENST00000640872 TAF7Q15545 349 aaPredicted RBP16.33■□□□□ 0.2
PAX6-280ENST00000640872 HDGFL1Q5TGJ6 251 aa16.33■□□□□ 0.2
PAX6-280ENST00000640872 SPC24Q8NBT2 197 aa16.33■□□□□ 0.2
PAX6-280ENST00000640872 FAM200AQ8TCP9 573 aa16.33■□□□□ 0.2
PAX6-280ENST00000640872 JAKMIP1Q96N16 626 aaKnown RBP16.33■□□□□ 0.2
PAX6-280ENST00000640872 GLRX3O76003 335 aaKnown RBP16.33■□□□□ 0.2
PAX6-280ENST00000640872 NBPF7P0C2Y1 421 aaPredicted RBP16.33■□□□□ 0.2
PAX6-280ENST00000640872 AMPHP49418 695 aa16.33■□□□□ 0.2
PAX6-280ENST00000640872 CBX1P83916 185 aa16.33■□□□□ 0.2
PAX6-280ENST00000640872 DTNBO60941 627 aa16.32■□□□□ 0.2
PAX6-280ENST00000640872 CHAF1AQ13111 956 aaPredicted RBP16.32■□□□□ 0.2
PAX6-280ENST00000640872 PRPF40BQ6NWY9 871 aaKnown RBP16.32■□□□□ 0.2
PAX6-280ENST00000640872 TTC6Q86TZ1 520 aa16.32■□□□□ 0.2
PAX6-280ENST00000640872 CYP46A1Q9Y6A2 500 aa16.32■□□□□ 0.2
PAX6-280ENST00000640872 PIK3C2AO00443 1686 aa16.32■□□□□ 0.2
PAX6-280ENST00000640872 VPS37CA5D8V6 355 aaPredicted RBP16.31■□□□□ 0.2
PAX6-280ENST00000640872 NLRP6P59044 892 aa16.31■□□□□ 0.2
PAX6-280ENST00000640872 ME3Q16798 604 aa16.31■□□□□ 0.2
PAX6-280ENST00000640872 HSP90AB4PQ58FF6 505 aa16.31■□□□□ 0.2
PAX6-280ENST00000640872 PDCL2Q8N4E4 241 aa16.31■□□□□ 0.2
PAX6-280ENST00000640872 RUFY2Q8WXA3 655 aa16.31■□□□□ 0.2
PAX6-280ENST00000640872 MRVI1Q9Y6F6 885 aa16.31■□□□□ 0.2
PAX6-280ENST00000640872 ELP1O95163 1332 aa16.31■□□□□ 0.2
PAX6-280ENST00000640872 MAP3K11Q16584 847 aa16.3■□□□□ 0.2
PAX6-280ENST00000640872 ZHX1Q9UKY1 873 aaPredicted RBP16.3■□□□□ 0.2
PAX6-280ENST00000640872 PTGS1P23219 599 aa16.3■□□□□ 0.2
PAX6-280ENST00000640872 TYRO3Q06418 890 aa16.3■□□□□ 0.2
PAX6-280ENST00000640872 NECTIN1Q15223 517 aa16.3■□□□□ 0.2
PAX6-280ENST00000640872 BEND3Q5T5X7 828 aa16.3■□□□□ 0.2
PAX6-280ENST00000640872 GTPBP4Q9BZE4 634 aaKnown RBP16.3■□□□□ 0.2
PAX6-280ENST00000640872 NUP62CLQ9H1M0 184 aa16.3■□□□□ 0.2
PAX6-280ENST00000640872 CCDC171Q6TFL3 1326 aa16.3■□□□□ 0.2
PAX6-280ENST00000640872 LIG1P18858 919 aa16.29■□□□□ 0.2
PAX6-280ENST00000640872 KRT85P78386 507 aa16.29■□□□□ 0.2
PAX6-280ENST00000640872 NECAB1Q8N987 351 aa16.29■□□□□ 0.2
PAX6-280ENST00000640872 TPCN1Q9ULQ1 816 aa16.29■□□□□ 0.2
PAX6-280ENST00000640872 PDIA4P13667 645 aaKnown RBP16.28■□□□□ 0.2
PAX6-280ENST00000640872 CDC37L1Q7L3B6 337 aa16.28■□□□□ 0.2
PAX6-280ENST00000640872 ANKLE2Q86XL3 938 aa16.28■□□□□ 0.2
PAX6-280ENST00000640872 MTX1Q13505 466 aa16.28■□□□□ 0.2
PAX6-280ENST00000640872 LUZP1Q86V48 1076 aa16.28■□□□□ 0.2
PAX6-280ENST00000640872 DNAAF4Q8WXU2 420 aa16.28■□□□□ 0.2
PAX6-280ENST00000640872 ADGRL3Q9HAR2 1447 aa16.27■□□□□ 0.2
PAX6-280ENST00000640872 LARP1BQ659C4 914 aaKnown RBP16.27■□□□□ 0.2
PAX6-280ENST00000640872 ABTB2Q8N961 1025 aa16.27■□□□□ 0.2
PAX6-280ENST00000640872 ECHDC1Q9NTX5 307 aa16.27■□□□□ 0.2
PAX6-280ENST00000640872 MED1Q15648 1581 aaPredicted RBP16.27■□□□□ 0.2
PAX6-280ENST00000640872 HOXC9P31274 260 aa16.27■□□□□ 0.19
PAX6-280ENST00000640872 RBM43Q6ZSC3 357 aaKnown RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms