RNA–Protein interactions for RNA: ENST00000640799.1

C1orf43-210, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 5 BASIC

Gene C1orf43, Length 1,287 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-210ENST00000640799 RRP7AQ9Y3A4 280 aaKnown RBP23.47■■□□□ 1.35
C1orf43-210ENST00000640799 NPHP1O15259 732 aa23.46■■□□□ 1.35
C1orf43-210ENST00000640799 ST5P78524 1137 aa23.46■■□□□ 1.35
C1orf43-210ENST00000640799 CEP350Q5VT06 3117 aa23.46■■□□□ 1.35
C1orf43-210ENST00000640799 NGEFQ8N5V2 710 aa23.46■■□□□ 1.35
C1orf43-210ENST00000640799 NMRK2Q9NPI5 230 aa23.46■■□□□ 1.35
C1orf43-210ENST00000640799 TSPYL4Q9UJ04 414 aa23.46■■□□□ 1.35
C1orf43-210ENST00000640799 RGL2O15211 777 aa23.45■■□□□ 1.34
C1orf43-210ENST00000640799 NBPF5PQ86XG9 351 aaPredicted RBP23.45■■□□□ 1.34
C1orf43-210ENST00000640799 PRKRIP1Q9H875 184 aaPredicted RBP23.45■■□□□ 1.34
C1orf43-210ENST00000640799 NIP7Q9Y221 180 aaKnown RBP eCLIP23.45■■□□□ 1.34
C1orf43-210ENST00000640799 NFKBIEO00221 500 aa23.43■■□□□ 1.34
C1orf43-210ENST00000640799 SRGNP10124 158 aa23.43■■□□□ 1.34
C1orf43-210ENST00000640799 MYL6BP14649 208 aa23.43■■□□□ 1.34
C1orf43-210ENST00000640799 NEUROD2Q15784 382 aa23.43■■□□□ 1.34
C1orf43-210ENST00000640799 ZNF219Q9P2Y4 722 aaPredicted RBP23.43■■□□□ 1.34
C1orf43-210ENST00000640799 ADAMTS8Q9UP79 889 aa23.43■■□□□ 1.34
C1orf43-210ENST00000640799 C21orf2O43822 256 aa23.42■■□□□ 1.34
C1orf43-210ENST00000640799 WDR43Q15061 677 aaKnown RBP eCLIP23.42■■□□□ 1.34
C1orf43-210ENST00000640799 TTLL7Q6ZT98 887 aa23.42■■□□□ 1.34
C1orf43-210ENST00000640799 RUNDC1Q96C34 613 aa23.42■■□□□ 1.34
C1orf43-210ENST00000640799 FAM177BA6PVY3 158 aa23.41■■□□□ 1.34
C1orf43-210ENST00000640799 LMNB1P20700 586 aa23.41■■□□□ 1.34
C1orf43-210ENST00000640799 LMOD3Q0VAK6 560 aa23.41■■□□□ 1.34
C1orf43-210ENST00000640799 TPTE2Q6XPS3 522 aa23.41■■□□□ 1.34
C1orf43-210ENST00000640799 SLX4Q8IY92 1834 aa23.4■■□□□ 1.34
C1orf43-210ENST00000640799 MAP3K15Q6ZN16 1313 aa23.4■■□□□ 1.34
C1orf43-210ENST00000640799 ERVV-1B6SEH8 477 aa23.4■■□□□ 1.34
C1orf43-210ENST00000640799 STYK1Q6J9G0 422 aa23.4■■□□□ 1.34
C1orf43-210ENST00000640799 MASTLQ96GX5 879 aa23.4■■□□□ 1.34
C1orf43-210ENST00000640799 BABAM1Q9NWV8 329 aa23.4■■□□□ 1.34
C1orf43-210ENST00000640799 TRIM35Q9UPQ4 493 aa23.4■■□□□ 1.34
C1orf43-210ENST00000640799 CACNA1SQ13698 1873 aa23.4■■□□□ 1.34
C1orf43-210ENST00000640799 CCDC88AQ3V6T2 1871 aa23.4■■□□□ 1.34
C1orf43-210ENST00000640799 NUP98P52948 1817 aa23.4■■□□□ 1.34
C1orf43-210ENST00000640799 CNKSR1Q969H4 720 aa23.39■■□□□ 1.33
C1orf43-210ENST00000640799 TOMM70O94826 608 aa23.38■■□□□ 1.33
C1orf43-210ENST00000640799 PRPF40BQ6NWY9 871 aaKnown RBP23.38■■□□□ 1.33
C1orf43-210ENST00000640799 FER1L6Q2WGJ9 1857 aa23.38■■□□□ 1.33
C1orf43-210ENST00000640799 KDM2BQ8NHM5 1336 aa23.37■■□□□ 1.33
C1orf43-210ENST00000640799 KLRG2A4D1S0 409 aaPredicted RBP23.37■■□□□ 1.33
C1orf43-210ENST00000640799 HSPA6P17066 643 aa23.37■■□□□ 1.33
C1orf43-210ENST00000640799 EIF2S2P20042 333 aaKnown RBP23.37■■□□□ 1.33
C1orf43-210ENST00000640799 PDIA6Q15084 440 aa23.37■■□□□ 1.33
C1orf43-210ENST00000640799 KIF6Q6ZMV9 814 aa23.37■■□□□ 1.33
C1orf43-210ENST00000640799 LRP10Q7Z4F1 713 aa23.37■■□□□ 1.33
C1orf43-210ENST00000640799 ZBTB3Q9H5J0 574 aa23.37■■□□□ 1.33
C1orf43-210ENST00000640799 ARFGEF2Q9Y6D5 1785 aa23.37■■□□□ 1.33
C1orf43-210ENST00000640799 ERBB4Q15303 1308 aa23.36■■□□□ 1.33
C1orf43-210ENST00000640799 ZC3H4Q9UPT8 1303 aaKnown RBP23.35■■□□□ 1.33
C1orf43-210ENST00000640799 CHL1O00533 1208 aa23.35■■□□□ 1.33
C1orf43-210ENST00000640799 PROSER3Q2NL68 480 aa23.35■■□□□ 1.33
C1orf43-210ENST00000640799 RRAGCQ9HB90 399 aa23.35■■□□□ 1.33
C1orf43-210ENST00000640799 TIAM2Q8IVF5 1701 aa23.35■■□□□ 1.33
C1orf43-210ENST00000640799 ANXA1P04083 346 aa23.34■■□□□ 1.33
C1orf43-210ENST00000640799 NPR1P16066 1061 aa23.34■■□□□ 1.33
C1orf43-210ENST00000640799 GPTP24298 496 aa23.34■■□□□ 1.33
C1orf43-210ENST00000640799 KRT24Q2M2I5 525 aa23.34■■□□□ 1.33
C1orf43-210ENST00000640799 UBN2Q6ZU65 1347 aa23.33■■□□□ 1.33
C1orf43-210ENST00000640799 TNRC6CQ9HCJ0 1690 aaKnown RBP23.33■■□□□ 1.33
C1orf43-210ENST00000640799 GTF2E1P29083 439 aaPredicted RBP23.33■■□□□ 1.33
C1orf43-210ENST00000640799 NUTM1Q86Y26 1132 aa23.33■■□□□ 1.33
C1orf43-210ENST00000640799 C7orf43Q8WVR3 580 aa23.33■■□□□ 1.33
C1orf43-210ENST00000640799 LAS1LQ9Y4W2 734 aaKnown RBP23.33■■□□□ 1.33
C1orf43-210ENST00000640799 ABCC12Q96J65 1359 aa23.32■■□□□ 1.32
C1orf43-210ENST00000640799 GLTPD2A6NH11 291 aa23.32■■□□□ 1.32
C1orf43-210ENST00000640799 ERFEQ4G0M1 354 aa23.32■■□□□ 1.32
C1orf43-210ENST00000640799 GIGYF2Q6Y7W6 1299 aaKnown RBP23.32■■□□□ 1.32
C1orf43-210ENST00000640799 ZNF34Q8IZ26 560 aa23.32■■□□□ 1.32
C1orf43-210ENST00000640799 NECTIN2Q92692 538 aa23.32■■□□□ 1.32
C1orf43-210ENST00000640799 NYXQ9GZU5 481 aa23.32■■□□□ 1.32
C1orf43-210ENST00000640799 SUSD4Q5VX71 490 aa23.31■■□□□ 1.32
C1orf43-210ENST00000640799 TAOK3Q9H2K8 898 aa23.31■■□□□ 1.32
C1orf43-210ENST00000640799 DICER1Q9UPY3 1922 aaKnown RBP23.31■■□□□ 1.32
C1orf43-210ENST00000640799 LTBP3Q9NS15 1303 aa23.31■■□□□ 1.32
C1orf43-210ENST00000640799 SOGA3Q5TF21 947 aa23.29■■□□□ 1.32
C1orf43-210ENST00000640799 OLFM4Q6UX06 510 aa23.29■■□□□ 1.32
C1orf43-210ENST00000640799 C16orf71Q8IYS4 520 aaPredicted RBP23.29■■□□□ 1.32
C1orf43-210ENST00000640799 RBM46Q8TBY0 533 aaKnown RBP23.29■■□□□ 1.32
C1orf43-210ENST00000640799 IBTKQ9P2D0 1353 aaPredicted RBP23.27■■□□□ 1.32
C1orf43-210ENST00000640799 APAF1O14727 1248 aa23.27■■□□□ 1.32
C1orf43-210ENST00000640799 NTSR2O95665 410 aa23.27■■□□□ 1.32
C1orf43-210ENST00000640799 CRY2Q49AN0 593 aa23.27■■□□□ 1.32
C1orf43-210ENST00000640799 COPS6Q7L5N1 327 aa23.27■■□□□ 1.32
C1orf43-210ENST00000640799 ALDH1B1P30837 517 aa23.26■■□□□ 1.31
C1orf43-210ENST00000640799 CCDC93Q567U6 631 aa23.26■■□□□ 1.31
C1orf43-210ENST00000640799 ZEB1P37275 1124 aaPredicted RBP23.25■■□□□ 1.31
C1orf43-210ENST00000640799 AIMP1Q12904 312 aaKnown RBP23.25■■□□□ 1.31
C1orf43-210ENST00000640799 CCDC184Q52MB2 194 aa23.25■■□□□ 1.31
C1orf43-210ENST00000640799 XAGE3Q8WTP9 111 aa23.25■■□□□ 1.31
C1orf43-210ENST00000640799 CFAP44Q96MT7 982 aa23.25■■□□□ 1.31
C1orf43-210ENST00000640799 DDX21Q9NR30 783 aaKnown RBP eCLIP23.25■■□□□ 1.31
C1orf43-210ENST00000640799 RIC1Q4ADV7 1423 aa23.25■■□□□ 1.31
C1orf43-210ENST00000640799 POTECB2RU33 542 aa23.24■■□□□ 1.31
C1orf43-210ENST00000640799 VEGFAP15692 232 aaPredicted RBP23.24■■□□□ 1.31
C1orf43-210ENST00000640799 PARP10Q53GL7 1025 aa23.23■■□□□ 1.31
C1orf43-210ENST00000640799 DPY19L2Q6NUT2 758 aa23.23■■□□□ 1.31
C1orf43-210ENST00000640799 C3orf67Q6ZVT6 689 aa23.23■■□□□ 1.31
C1orf43-210ENST00000640799 PPP1R42Q7Z4L9 355 aa23.23■■□□□ 1.31
C1orf43-210ENST00000640799 MBIPQ9NS73 344 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms