RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 NSRP1Q9H0G5 558 aaKnown RBP9.54□□□□□ -0.88
NECAP1-227ENST00000640648 TNNQ9UQP3 1299 aa9.54□□□□□ -0.88
NECAP1-227ENST00000640648 URI1O94763 535 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-227ENST00000640648 GCKP35557 465 aa9.54□□□□□ -0.88
NECAP1-227ENST00000640648 PSMD7P51665 324 aa9.54□□□□□ -0.88
NECAP1-227ENST00000640648 NLRP5P59047 1200 aa9.54□□□□□ -0.88
NECAP1-227ENST00000640648 TRIM29Q14134 588 aa9.54□□□□□ -0.88
NECAP1-227ENST00000640648 BRD3Q15059 726 aa9.54□□□□□ -0.88
NECAP1-227ENST00000640648 PPFIBP1Q86W92 1011 aa9.54□□□□□ -0.88
NECAP1-227ENST00000640648 CEP89Q96ST8 783 aa9.54□□□□□ -0.88
NECAP1-227ENST00000640648 KIAA0586Q9BVV6 1533 aa9.54□□□□□ -0.88
NECAP1-227ENST00000640648 RIOK3O14730 519 aaKnown RBP9.54□□□□□ -0.88
NECAP1-227ENST00000640648 MX1P20591 662 aa9.54□□□□□ -0.88
NECAP1-227ENST00000640648 PEG3Q9GZU2 1588 aa9.54□□□□□ -0.88
NECAP1-227ENST00000640648 GUCY2CP25092 1073 aa9.54□□□□□ -0.88
NECAP1-227ENST00000640648 ANAPC15P60006 121 aa9.54□□□□□ -0.88
NECAP1-227ENST00000640648 RNF187Q5TA31 235 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-227ENST00000640648 SYNE3Q6ZMZ3 975 aa9.54□□□□□ -0.88
NECAP1-227ENST00000640648 GAS2L2Q8NHY3 880 aa9.54□□□□□ -0.88
NECAP1-227ENST00000640648 DONSONQ9NYP3 566 aa9.54□□□□□ -0.88
NECAP1-227ENST00000640648 CCDC141Q6ZP82 1450 aa9.54□□□□□ -0.88
NECAP1-227ENST00000640648 BUB1BO60566 1050 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-227ENST00000640648 TXLNAP40222 546 aa9.53□□□□□ -0.88
NECAP1-227ENST00000640648 WASHC4Q2M389 1173 aa9.53□□□□□ -0.88
NECAP1-227ENST00000640648 LRRFIP1Q32MZ4 808 aaKnown RBP9.53□□□□□ -0.88
NECAP1-227ENST00000640648 ANKS4BQ8N8V4 417 aa9.53□□□□□ -0.88
NECAP1-227ENST00000640648 SIL1Q9H173 461 aa9.53□□□□□ -0.88
NECAP1-227ENST00000640648 IMMTQ16891 758 aaKnown RBP9.53□□□□□ -0.88
NECAP1-227ENST00000640648 MSL1Q68DK7 614 aa9.53□□□□□ -0.88
NECAP1-227ENST00000640648 MCM10Q7L590 875 aa9.53□□□□□ -0.88
NECAP1-227ENST00000640648 MED4Q9NPJ6 270 aa9.53□□□□□ -0.88
NECAP1-227ENST00000640648 RRP15Q9Y3B9 282 aaKnown RBP9.53□□□□□ -0.88
NECAP1-227ENST00000640648 HIP1O00291 1037 aa9.53□□□□□ -0.88
NECAP1-227ENST00000640648 RAPGEF3O95398 923 aa9.53□□□□□ -0.88
NECAP1-227ENST00000640648 ZFYP08048 801 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-227ENST00000640648 CCDC175P0C221 793 aa9.53□□□□□ -0.88
NECAP1-227ENST00000640648 CCT4P50991 539 aaKnown RBP9.53□□□□□ -0.88
NECAP1-227ENST00000640648 WHAMMP3Q1A5X7 153 aa9.53□□□□□ -0.88
NECAP1-227ENST00000640648 CEP104O60308 925 aa9.53□□□□□ -0.88
NECAP1-227ENST00000640648 CWC27Q6UX04 472 aaKnown RBP9.53□□□□□ -0.88
NECAP1-227ENST00000640648 NFXL1Q6ZNB6 911 aa9.53□□□□□ -0.88
NECAP1-227ENST00000640648 LUC7L2Q9Y383 392 aaKnown RBP9.53□□□□□ -0.88
NECAP1-227ENST00000640648 USH1CQ9Y6N9 552 aa9.53□□□□□ -0.88
NECAP1-227ENST00000640648 MAGI1Q96QZ7 1491 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-227ENST00000640648 CASTP20810 708 aaKnown RBP9.52□□□□□ -0.88
NECAP1-227ENST00000640648 NAP1L1P55209 391 aaKnown RBP9.52□□□□□ -0.88
NECAP1-227ENST00000640648 MUM1L1Q5H9M0 696 aa9.52□□□□□ -0.88
NECAP1-227ENST00000640648 BATF3Q9NR55 127 aa9.52□□□□□ -0.88
NECAP1-227ENST00000640648 ANAPC4Q9UJX5 808 aa9.52□□□□□ -0.88
NECAP1-227ENST00000640648 FAM69CQ0P6D2 419 aa9.52□□□□□ -0.89
NECAP1-227ENST00000640648 SRGAP3O43295 1099 aa9.52□□□□□ -0.89
NECAP1-227ENST00000640648 ACTN2P35609 894 aa9.52□□□□□ -0.89
NECAP1-227ENST00000640648 DYNC1I2Q13409 638 aaKnown RBP9.52□□□□□ -0.89
NECAP1-227ENST00000640648 SMC1AQ14683 1233 aaKnown RBP9.52□□□□□ -0.89
NECAP1-227ENST00000640648 MEX3CQ5U5Q3 659 aaKnown RBP9.52□□□□□ -0.89
NECAP1-227ENST00000640648 RPAP2Q8IXW5 612 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-227ENST00000640648 ABTB2Q8N961 1025 aa9.52□□□□□ -0.89
NECAP1-227ENST00000640648 ARMC2Q8NEN0 867 aa9.52□□□□□ -0.89
NECAP1-227ENST00000640648 DDX54Q8TDD1 881 aaKnown RBP9.52□□□□□ -0.89
NECAP1-227ENST00000640648 SRCIN1Q9C0H9 1055 aa9.52□□□□□ -0.89
NECAP1-227ENST00000640648 ITGB1BP2Q9UKP3 347 aa9.52□□□□□ -0.89
NECAP1-227ENST00000640648 CYP46A1Q9Y6A2 500 aa9.52□□□□□ -0.89
NECAP1-227ENST00000640648 MORC2Q9Y6X9 1032 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-227ENST00000640648 SEC24BO95487 1268 aa9.52□□□□□ -0.89
NECAP1-227ENST00000640648 TRAF1Q13077 416 aa9.52□□□□□ -0.89
NECAP1-227ENST00000640648 BMP2KLQ5H9B9 411 aa9.52□□□□□ -0.89
NECAP1-227ENST00000640648 RALYLQ86SE5 291 aaKnown RBP9.52□□□□□ -0.89
NECAP1-227ENST00000640648 FERMT3Q86UX7 667 aa9.52□□□□□ -0.89
NECAP1-227ENST00000640648 CCDC65Q8IXS2 484 aa9.52□□□□□ -0.89
NECAP1-227ENST00000640648 ZMAT2Q96NC0 199 aaKnown RBP9.52□□□□□ -0.89
NECAP1-227ENST00000640648 NAA15Q9BXJ9 866 aaKnown RBP9.52□□□□□ -0.89
NECAP1-227ENST00000640648 FAM184BQ9ULE4 1060 aa9.52□□□□□ -0.89
NECAP1-227ENST00000640648 THOC2Q8NI27 1593 aaKnown RBP9.52□□□□□ -0.89
NECAP1-227ENST00000640648 MRC2Q9UBG0 1479 aa9.52□□□□□ -0.89
NECAP1-227ENST00000640648 TBC1D9Q6ZT07 1266 aa9.52□□□□□ -0.89
NECAP1-227ENST00000640648 CACNA2D4Q7Z3S7 1137 aa9.52□□□□□ -0.89
NECAP1-227ENST00000640648 SH2B1Q9NRF2 756 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-227ENST00000640648 SKILP12757 684 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 ZSCAN20P17040 1043 aaPredicted RBP9.51□□□□□ -0.89
NECAP1-227ENST00000640648 LARP1BQ659C4 914 aaKnown RBP9.51□□□□□ -0.89
NECAP1-227ENST00000640648 FAM76AQ8TAV0 307 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 AFAP1L1Q8TED9 768 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 TRIM6Q9C030 488 aaPredicted RBP9.51□□□□□ -0.89
NECAP1-227ENST00000640648 GDPD2Q9HCC8 539 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 NLRP2Q9NX02 1062 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 DDX41Q9UJV9 622 aaKnown RBP9.51□□□□□ -0.89
NECAP1-227ENST00000640648 IFT140Q96RY7 1462 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 BIVM-ERCC5R4GMW8 1640 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 F6X3S4 739 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 KIF4BQ2VIQ3 1234 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 GPR161Q8N6U8 529 aaKnown RBP9.51□□□□□ -0.89
NECAP1-227ENST00000640648 IFT74Q96LB3 600 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 ATP2B1P20020 1258 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 FBLN1P23142 703 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 PPP2R5AQ15172 486 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 LRRC23Q53EV4 343 aaPredicted RBP9.51□□□□□ -0.89
NECAP1-227ENST00000640648 WAPLQ7Z5K2 1190 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 RAPGEF4Q8WZA2 1011 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 EMILIN1Q9Y6C2 1016 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 LAMC3Q9Y6N6 1575 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms