RNA–Protein interactions for RNA: ENST00000640099.1

NECAP1-224, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,313 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-224ENST00000640099 FAM227BQ96M60 508 aa9.27□□□□□ -0.93
NECAP1-224ENST00000640099 NAP1L5Q96NT1 182 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-224ENST00000640099 TMEM63CQ9P1W3 806 aa9.27□□□□□ -0.93
NECAP1-224ENST00000640099 USP16Q9Y5T5 823 aa9.27□□□□□ -0.93
NECAP1-224ENST00000640099 GRM8O00222 908 aa9.27□□□□□ -0.93
NECAP1-224ENST00000640099 G3BP1Q13283 466 aaKnown RBP eCLIP9.27□□□□□ -0.93
NECAP1-224ENST00000640099 ZNF496Q96IT1 587 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-224ENST00000640099 RBSNQ9H1K0 784 aa9.27□□□□□ -0.93
NECAP1-224ENST00000640099 LARGE1O95461 756 aa9.26□□□□□ -0.93
NECAP1-224ENST00000640099 CHGBP05060 677 aa9.26□□□□□ -0.93
NECAP1-224ENST00000640099 HSPA4P34932 840 aa9.26□□□□□ -0.93
NECAP1-224ENST00000640099 AK2P54819 239 aa9.26□□□□□ -0.93
NECAP1-224ENST00000640099 ADCK5Q3MIX3 580 aa9.26□□□□□ -0.93
NECAP1-224ENST00000640099 EPHA10Q5JZY3 1008 aa9.26□□□□□ -0.93
NECAP1-224ENST00000640099 ZNF790Q6PG37 636 aa9.26□□□□□ -0.93
NECAP1-224ENST00000640099 MPNDQ8N594 471 aa9.26□□□□□ -0.93
NECAP1-224ENST00000640099 EAF2Q96CJ1 260 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-224ENST00000640099 KAZALD1Q96I82 304 aa9.26□□□□□ -0.93
NECAP1-224ENST00000640099 LSG1Q9H089 658 aaKnown RBP9.26□□□□□ -0.93
NECAP1-224ENST00000640099 NPHP4O75161 1426 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-224ENST00000640099 ERBB3P21860 1342 aa9.26□□□□□ -0.93
NECAP1-224ENST00000640099 LRRC37A3O60309 1634 aa9.26□□□□□ -0.93
NECAP1-224ENST00000640099 GADD45BO75293 160 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-224ENST00000640099 IGKV5-2P06315 115 aa9.26□□□□□ -0.93
NECAP1-224ENST00000640099 ATF3P18847 181 aa9.26□□□□□ -0.93
NECAP1-224ENST00000640099 PTMSP20962 102 aa9.26□□□□□ -0.93
NECAP1-224ENST00000640099 JAKMIP1Q96N16 626 aaKnown RBP9.26□□□□□ -0.93
NECAP1-224ENST00000640099 CHMP3Q9Y3E7 222 aa9.26□□□□□ -0.93
NECAP1-224ENST00000640099 GLRX3O76003 335 aaKnown RBP9.26□□□□□ -0.93
NECAP1-224ENST00000640099 SASH1O94885 1247 aa9.26□□□□□ -0.93
NECAP1-224ENST00000640099 TATP17735 454 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-224ENST00000640099 ECHDC1Q9NTX5 307 aa9.26□□□□□ -0.93
NECAP1-224ENST00000640099 ZNF330Q9Y3S2 320 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-224ENST00000640099 HOXB7P09629 217 aa9.25□□□□□ -0.93
NECAP1-224ENST00000640099 HSPA2P54652 639 aa9.25□□□□□ -0.93
NECAP1-224ENST00000640099 PDIA6Q15084 440 aa9.25□□□□□ -0.93
NECAP1-224ENST00000640099 HSP90AB4PQ58FF6 505 aa9.25□□□□□ -0.93
NECAP1-224ENST00000640099 CCDC83Q8IWF9 413 aa9.25□□□□□ -0.93
NECAP1-224ENST00000640099 NECAB1Q8N987 351 aa9.25□□□□□ -0.93
NECAP1-224ENST00000640099 RAD50Q92878 1312 aa9.25□□□□□ -0.93
NECAP1-224ENST00000640099 ESPNB1AK53 854 aa9.25□□□□□ -0.93
NECAP1-224ENST00000640099 BRD1O95696 1058 aa9.25□□□□□ -0.93
NECAP1-224ENST00000640099 DDX58O95786 925 aaKnown RBP9.25□□□□□ -0.93
NECAP1-224ENST00000640099 CLEC17AQ6ZS10 378 aa9.25□□□□□ -0.93
NECAP1-224ENST00000640099 LINS1Q8NG48 757 aa9.25□□□□□ -0.93
NECAP1-224ENST00000640099 ANP32BQ92688 251 aaKnown RBP9.25□□□□□ -0.93
NECAP1-224ENST00000640099 DDX21Q9NR30 783 aaKnown RBP eCLIP9.25□□□□□ -0.93
NECAP1-224ENST00000640099 HYPKQ9NX55 129 aa9.25□□□□□ -0.93
NECAP1-224ENST00000640099 CUL4AQ13619 759 aa9.25□□□□□ -0.93
NECAP1-224ENST00000640099 RUFY3Q7L099 469 aa9.25□□□□□ -0.93
NECAP1-224ENST00000640099 ANAPC15P60006 121 aa9.24□□□□□ -0.93
NECAP1-224ENST00000640099 NMIQ13287 307 aaPredicted RBP9.24□□□□□ -0.93
NECAP1-224ENST00000640099 UBE3BQ7Z3V4 1068 aa9.24□□□□□ -0.93
NECAP1-224ENST00000640099 TTC5Q8N0Z6 440 aa9.24□□□□□ -0.93
NECAP1-224ENST00000640099 FSD1Q9BTV5 496 aa9.24□□□□□ -0.93
NECAP1-224ENST00000640099 C19orf44Q9H6X5 657 aa9.24□□□□□ -0.93
NECAP1-224ENST00000640099 SLC52A2Q9HAB3 445 aa9.24□□□□□ -0.93
NECAP1-224ENST00000640099 TAF6LQ9Y6J9 622 aa9.24□□□□□ -0.93
NECAP1-224ENST00000640099 ALDH1L1O75891 902 aa9.24□□□□□ -0.93
NECAP1-224ENST00000640099 PHKG2P15735 406 aa9.24□□□□□ -0.93
NECAP1-224ENST00000640099 MCM2P49736 904 aa9.24□□□□□ -0.93
NECAP1-224ENST00000640099 NEXNQ0ZGT2 675 aa9.24□□□□□ -0.93
NECAP1-224ENST00000640099 NPHP3Q7Z494 1330 aa9.24□□□□□ -0.93
NECAP1-224ENST00000640099 GPATCH3Q96I76 525 aa9.23□□□□□ -0.93
NECAP1-224ENST00000640099 CNPY2Q9Y2B0 182 aa9.23□□□□□ -0.93
NECAP1-224ENST00000640099 PXDNLA1KZ92 1463 aa9.23□□□□□ -0.93
NECAP1-224ENST00000640099 CYP27B1O15528 508 aa9.23□□□□□ -0.93
NECAP1-224ENST00000640099 FIBPO43427 364 aa9.23□□□□□ -0.93
NECAP1-224ENST00000640099 USP48Q86UV5 1035 aa9.23□□□□□ -0.93
NECAP1-224ENST00000640099 DNAJC2Q99543 621 aaKnown RBP9.23□□□□□ -0.93
NECAP1-224ENST00000640099 AOX1Q06278 1338 aa9.23□□□□□ -0.93
NECAP1-224ENST00000640099 A0A0D9SFI3 127 aa9.23□□□□□ -0.93
NECAP1-224ENST00000640099 NEURL1BA8MQ27 555 aa9.23□□□□□ -0.93
NECAP1-224ENST00000640099 STK3Q13188 491 aa9.23□□□□□ -0.93
NECAP1-224ENST00000640099 SLFNL1Q499Z3 407 aa9.23□□□□□ -0.93
NECAP1-224ENST00000640099 SMC3Q9UQE7 1217 aa9.23□□□□□ -0.93
NECAP1-224ENST00000640099 CHD2O14647 1828 aaKnown RBP9.22□□□□□ -0.93
NECAP1-224ENST00000640099 VPS37CA5D8V6 355 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-224ENST00000640099 CABP4P57796 275 aa9.22□□□□□ -0.93
NECAP1-224ENST00000640099 ANKRD13DQ6ZTN6 518 aa9.22□□□□□ -0.93
NECAP1-224ENST00000640099 PDRG1Q9NUG6 133 aa9.22□□□□□ -0.93
NECAP1-224ENST00000640099 RBM8AQ9Y5S9 174 aaKnown RBP9.22□□□□□ -0.93
NECAP1-224ENST00000640099 LARP1Q6PKG0 1096 aaKnown RBP9.22□□□□□ -0.93
NECAP1-224ENST00000640099 FERMT3Q86UX7 667 aa9.22□□□□□ -0.93
NECAP1-224ENST00000640099 CHMP4AQ9BY43 222 aa9.22□□□□□ -0.93
NECAP1-224ENST00000640099 TMEM94Q12767 1356 aa9.22□□□□□ -0.93
NECAP1-224ENST00000640099 C1orf167Q5SNV9 1468 aa9.21□□□□□ -0.93
NECAP1-224ENST00000640099 PPFIA3O75145 1194 aa9.21□□□□□ -0.93
NECAP1-224ENST00000640099 GCKRQ14397 625 aa9.21□□□□□ -0.93
NECAP1-224ENST00000640099 CCDC129Q6ZRS4 1044 aa9.21□□□□□ -0.93
NECAP1-224ENST00000640099 IFNL2Q8IZJ0 200 aa9.21□□□□□ -0.93
NECAP1-224ENST00000640099 RUFY2Q8WXA3 655 aa9.21□□□□□ -0.93
NECAP1-224ENST00000640099 CCDC85AQ96PX6 553 aaPredicted RBP9.21□□□□□ -0.93
NECAP1-224ENST00000640099 ISY1Q9ULR0 285 aaKnown RBP9.21□□□□□ -0.93
NECAP1-224ENST00000640099 LIMCH1Q9UPQ0 1083 aa9.21□□□□□ -0.93
NECAP1-224ENST00000640099 A0A087WZG4 1122 aa9.21□□□□□ -0.93
NECAP1-224ENST00000640099 SYT1P21579 422 aa9.21□□□□□ -0.93
NECAP1-224ENST00000640099 ZNF445P59923 1031 aa9.21□□□□□ -0.93
NECAP1-224ENST00000640099 TFCP2Q12800 502 aa9.21□□□□□ -0.93
NECAP1-224ENST00000640099 MTX1Q13505 466 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms