RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 IL16Q14005 1332 aa28.28■■■□□ 2.12
SCN1B-206ENST00000638536 HDGFL1Q5TGJ6 251 aa28.28■■■□□ 2.12
SCN1B-206ENST00000638536 WDR63Q8IWG1 891 aa28.28■■■□□ 2.12
SCN1B-206ENST00000638536 CHPF2Q9P2E5 772 aa28.28■■■□□ 2.12
SCN1B-206ENST00000638536 SERPINB2P05120 415 aa28.27■■■□□ 2.12
SCN1B-206ENST00000638536 HOXB7P09629 217 aa28.27■■■□□ 2.12
SCN1B-206ENST00000638536 WWC3Q9ULE0 1092 aa28.26■■■□□ 2.11
SCN1B-206ENST00000638536 ZBTB3Q9H5J0 574 aa28.25■■■□□ 2.11
SCN1B-206ENST00000638536 DDX21Q9NR30 783 aaKnown RBP eCLIP28.25■■■□□ 2.11
SCN1B-206ENST00000638536 ZNF521Q96K83 1311 aa28.24■■■□□ 2.11
SCN1B-206ENST00000638536 CLEC4GQ6UXB4 293 aa28.24■■■□□ 2.11
SCN1B-206ENST00000638536 MAP3K15Q6ZN16 1313 aa28.24■■■□□ 2.11
SCN1B-206ENST00000638536 FANCIQ9NVI1 1328 aa28.24■■■□□ 2.11
SCN1B-206ENST00000638536 CCDC24Q8N4L8 307 aa28.23■■■□□ 2.11
SCN1B-206ENST00000638536 CARMIL3Q8ND23 1372 aa28.23■■■□□ 2.11
SCN1B-206ENST00000638536 PXDNLA1KZ92 1463 aa28.23■■■□□ 2.11
SCN1B-206ENST00000638536 A0A0G2JLW4 131 aa28.22■■■□□ 2.11
SCN1B-206ENST00000638536 AIMP1Q12904 312 aaKnown RBP28.22■■■□□ 2.11
SCN1B-206ENST00000638536 COPS6Q7L5N1 327 aa28.22■■■□□ 2.11
SCN1B-206ENST00000638536 XAGE3Q8WTP9 111 aa28.21■■■□□ 2.11
SCN1B-206ENST00000638536 SETDB2Q96T68 719 aa28.21■■■□□ 2.11
SCN1B-206ENST00000638536 PELP1Q8IZL8 1130 aaKnown RBP28.21■■■□□ 2.11
SCN1B-206ENST00000638536 ANKRD31Q8N7Z5 1873 aa28.2■■■□□ 2.11
SCN1B-206ENST00000638536 ERVV-1B6SEH8 477 aa28.2■■■□□ 2.1
SCN1B-206ENST00000638536 YBX3P16989 372 aaKnown RBP eCLIP28.2■■■□□ 2.1
SCN1B-206ENST00000638536 KIF6Q6ZMV9 814 aa28.2■■■□□ 2.1
SCN1B-206ENST00000638536 ZNF652Q9Y2D9 606 aa28.2■■■□□ 2.1
SCN1B-206ENST00000638536 DPEP1P16444 411 aa28.19■■■□□ 2.1
SCN1B-206ENST00000638536 NIP7Q9Y221 180 aaKnown RBP eCLIP28.19■■■□□ 2.1
SCN1B-206ENST00000638536 BRCA1P38398 1863 aaKnown RBP28.19■■■□□ 2.1
SCN1B-206ENST00000638536 PRR5LQ6MZQ0 368 aa28.18■■■□□ 2.1
SCN1B-206ENST00000638536 DBF4Q9UBU7 674 aaPredicted RBP28.18■■■□□ 2.1
SCN1B-206ENST00000638536 KCNA3P22001 575 aa28.18■■■□□ 2.1
SCN1B-206ENST00000638536 TGFB2P61812 414 aa28.18■■■□□ 2.1
SCN1B-206ENST00000638536 TCERG1O14776 1098 aaKnown RBP28.17■■■□□ 2.1
SCN1B-206ENST00000638536 RGL2O15211 777 aa28.17■■■□□ 2.1
SCN1B-206ENST00000638536 CHRNA5P30532 468 aa28.17■■■□□ 2.1
SCN1B-206ENST00000638536 GPR162Q16538 588 aa28.17■■■□□ 2.1
SCN1B-206ENST00000638536 TWISTNBQ3B726 338 aaPredicted RBP28.17■■■□□ 2.1
SCN1B-206ENST00000638536 FAM177BA6PVY3 158 aa28.16■■■□□ 2.1
SCN1B-206ENST00000638536 EXOSC9Q06265 439 aaKnown RBP28.16■■■□□ 2.1
SCN1B-206ENST00000638536 GIGYF2Q6Y7W6 1299 aaKnown RBP28.16■■■□□ 2.1
SCN1B-206ENST00000638536 PHAXQ9H814 394 aaKnown RBP28.16■■■□□ 2.1
SCN1B-206ENST00000638536 GPTP24298 496 aa28.15■■■□□ 2.1
SCN1B-206ENST00000638536 UBN2Q6ZU65 1347 aa28.14■■■□□ 2.1
SCN1B-206ENST00000638536 GOLGA2Q08379 1002 aa28.13■■■□□ 2.09
SCN1B-206ENST00000638536 HYPKQ9NX55 129 aa28.13■■■□□ 2.09
SCN1B-206ENST00000638536 ATP10DQ9P241 1426 aa28.12■■■□□ 2.09
SCN1B-206ENST00000638536 DCAF8L1A6NGE4 600 aa28.12■■■□□ 2.09
SCN1B-206ENST00000638536 NBPF5PQ86XG9 351 aaPredicted RBP28.12■■■□□ 2.09
SCN1B-206ENST00000638536 ZNF34Q8IZ26 560 aa28.12■■■□□ 2.09
SCN1B-206ENST00000638536 CNBD1Q8NA66 436 aa28.12■■■□□ 2.09
SCN1B-206ENST00000638536 VAMP4O75379 141 aa28.11■■■□□ 2.09
SCN1B-206ENST00000638536 CCDC30Q5VVM6 783 aa28.11■■■□□ 2.09
SCN1B-206ENST00000638536 ANKRD36CQ5JPF3 1778 aa28.11■■■□□ 2.09
SCN1B-206ENST00000638536 CDCA7LQ96GN5 454 aa28.1■■■□□ 2.09
SCN1B-206ENST00000638536 MYH16Q9H6N6 1097 aa28.1■■■□□ 2.09
SCN1B-206ENST00000638536 COL11A2P13942 1736 aaPredicted RBP28.09■■■□□ 2.09
SCN1B-206ENST00000638536 SUSD4Q5VX71 490 aa28.09■■■□□ 2.09
SCN1B-206ENST00000638536 ARFGEF2Q9Y6D5 1785 aa28.08■■■□□ 2.09
SCN1B-206ENST00000638536 ANKRD13DQ6ZTN6 518 aa28.08■■■□□ 2.09
SCN1B-206ENST00000638536 ZNF428Q96B54 188 aa28.08■■■□□ 2.09
SCN1B-206ENST00000638536 DLEC1Q9Y238 1755 aa28.08■■■□□ 2.09
SCN1B-206ENST00000638536 NPHP1O15259 732 aa28.07■■■□□ 2.08
SCN1B-206ENST00000638536 NUTM1Q86Y26 1132 aa28.07■■■□□ 2.08
SCN1B-206ENST00000638536 PLBD2Q8NHP8 589 aa28.07■■■□□ 2.08
SCN1B-206ENST00000638536 BRIP1Q9BX63 1249 aa28.07■■■□□ 2.08
SCN1B-206ENST00000638536 TPTE2Q6XPS3 522 aa28.07■■■□□ 2.08
SCN1B-206ENST00000638536 CHD4Q14839 1912 aa28.06■■■□□ 2.08
SCN1B-206ENST00000638536 G2E3Q7L622 706 aa28.06■■■□□ 2.08
SCN1B-206ENST00000638536 C2CD5Q86YS7 1000 aa28.06■■■□□ 2.08
SCN1B-206ENST00000638536 BCS1LQ9Y276 419 aa28.06■■■□□ 2.08
SCN1B-206ENST00000638536 CACNA1FO60840 1977 aa28.05■■■□□ 2.08
SCN1B-206ENST00000638536 SLFN5Q08AF3 891 aa28.05■■■□□ 2.08
SCN1B-206ENST00000638536 TCIRG1Q13488 830 aa28.05■■■□□ 2.08
SCN1B-206ENST00000638536 PIM2Q9P1W9 311 aa28.05■■■□□ 2.08
SCN1B-206ENST00000638536 ST5P78524 1137 aa28.04■■■□□ 2.08
SCN1B-206ENST00000638536 ABCC12Q96J65 1359 aa28.04■■■□□ 2.08
SCN1B-206ENST00000638536 TNRC6CQ9HCJ0 1690 aaKnown RBP28.03■■■□□ 2.08
SCN1B-206ENST00000638536 NTSR2O95665 410 aa28.03■■■□□ 2.08
SCN1B-206ENST00000638536 SLC4A2P04920 1241 aa28.03■■■□□ 2.08
SCN1B-206ENST00000638536 ERFEQ4G0M1 354 aa28.03■■■□□ 2.08
SCN1B-206ENST00000638536 ARFGEF1Q9Y6D6 1849 aa28.03■■■□□ 2.08
SCN1B-206ENST00000638536 E9PSI1 815 aa28.02■■■□□ 2.08
SCN1B-206ENST00000638536 ATP5J2-PTCD1G3V325 749 aa28.02■■■□□ 2.08
SCN1B-206ENST00000638536 H0YIN7 160 aa28.02■■■□□ 2.08
SCN1B-206ENST00000638536 PDE6BP35913 854 aa28.02■■■□□ 2.08
SCN1B-206ENST00000638536 NLRP10Q86W26 655 aa28.02■■■□□ 2.08
SCN1B-206ENST00000638536 STK31Q9BXU1 1019 aa28.02■■■□□ 2.08
SCN1B-206ENST00000638536 CACNA1SQ13698 1873 aa28.02■■■□□ 2.08
SCN1B-206ENST00000638536 GRIN3BO60391 1043 aa28■■■□□ 2.07
SCN1B-206ENST00000638536 HSP90AB3PQ58FF7 597 aa28■■■□□ 2.07
SCN1B-206ENST00000638536 RIC3Q7Z5B4 369 aa28■■■□□ 2.07
SCN1B-206ENST00000638536 SYNE4Q8N205 404 aa28■■■□□ 2.07
SCN1B-206ENST00000638536 CHMP4AQ9BY43 222 aa28■■■□□ 2.07
SCN1B-206ENST00000638536 GTF2E1P29083 439 aaPredicted RBP28■■■□□ 2.07
SCN1B-206ENST00000638536 PARP10Q53GL7 1025 aa28■■■□□ 2.07
SCN1B-206ENST00000638536 DALRD3Q5D0E6 543 aaKnown RBP28■■■□□ 2.07
SCN1B-206ENST00000638536 TRMT2AQ8IZ69 625 aaKnown RBP28■■■□□ 2.07
SCN1B-206ENST00000638536 ISCA1Q9BUE6 129 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms