RNA–Protein interactions for RNA: ENST00000637911.1

SYNGAP1-225, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 157 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-225ENST00000637911 ZNF417Q8TAU3 575 aa0.17□□□□□ -2.38
SYNGAP1-225ENST00000637911 SHKBP1Q8TBC3 707 aa0.17□□□□□ -2.38
SYNGAP1-225ENST00000637911 RNF217Q8TC41 542 aa0.17□□□□□ -2.38
SYNGAP1-225ENST00000637911 USP33Q8TEY7 942 aa0.17□□□□□ -2.38
SYNGAP1-225ENST00000637911 KCNN1Q92952 543 aa0.17□□□□□ -2.38
SYNGAP1-225ENST00000637911 THAP11Q96EK4 314 aa0.17□□□□□ -2.38
SYNGAP1-225ENST00000637911 LIN37Q96GY3 246 aaPredicted RBP0.17□□□□□ -2.38
SYNGAP1-225ENST00000637911 ZNF587Q96SQ5 575 aaPredicted RBP0.17□□□□□ -2.38
SYNGAP1-225ENST00000637911 KRTAP4-1Q9BYQ7 146 aa0.17□□□□□ -2.38
SYNGAP1-225ENST00000637911 CD320Q9NPF0 282 aa0.17□□□□□ -2.38
SYNGAP1-225ENST00000637911 PAK6Q9NQU5 681 aaPredicted RBP0.17□□□□□ -2.38
SYNGAP1-225ENST00000637911 ATG3Q9NT62 314 aa0.17□□□□□ -2.38
SYNGAP1-225ENST00000637911 BSDC1Q9NW68 430 aaPredicted RBP0.17□□□□□ -2.38
SYNGAP1-225ENST00000637911 FAM198AQ9UFP1 575 aa0.17□□□□□ -2.38
SYNGAP1-225ENST00000637911 CNOT11Q9UKZ1 510 aaKnown RBP0.17□□□□□ -2.38
SYNGAP1-225ENST00000637911 LEMD3Q9Y2U8 911 aa0.17□□□□□ -2.38
SYNGAP1-225ENST00000637911 DYRK1BQ9Y463 629 aa0.17□□□□□ -2.38
SYNGAP1-225ENST00000637911 EMILIN1Q9Y6C2 1016 aa0.17□□□□□ -2.38
SYNGAP1-225ENST00000637911 ZNF503-AS2A6NEH8 195 aa0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 C2CD2LO14523 706 aa0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 TRIM13O60858 407 aa0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 NR3C2P08235 984 aa0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 FGFR3P22607 806 aa0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 WASP42768 502 aa0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 CTBSQ01459 385 aa0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 UBAP2LQ14157 1087 aaKnown RBP0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 FOXD4L5Q5VV16 416 aaPredicted RBP0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 FAM117BQ6P1L5 589 aa0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 CRIP3Q6Q6R5 217 aa0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 PRR23BQ6ZRT6 265 aa0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 TMEM151BQ8IW70 566 aa0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 FEZF2Q8TBJ5 459 aa0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 FOXD4L4Q8WXT5 416 aaPredicted RBP0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 COL26A1Q96A83 441 aa0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 VPS11Q9H270 941 aa0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 ADAM7Q9H2U9 754 aa0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 SMPD4Q9NXE4 827 aa0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 ATXN7L1Q9ULK2 861 aaPredicted RBP0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 SALL2Q9Y467 1007 aaPredicted RBP0.16□□□□□ -2.38
SYNGAP1-225ENST00000637911 ELOA3CA0A087WX78 387 aaPredicted RBP0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 HMX2A2RU54 273 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 ELOA3DA6NLF2 546 aaPredicted RBP0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 ETV2O00321 342 aaPredicted RBP0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 F11P03951 625 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 SLC10A3P09131 477 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 MED14OSP0DP75 135 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 FOSL1P15407 271 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 KRTAP10-3P60369 221 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 MSMPQ1L6U9 139 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 TSR1Q2NL82 804 aaKnown RBP0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 ELOA3BQ3SY89 546 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 LINC01559Q495D7 138 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 KLHL22Q53GT1 634 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 MORN1Q5T089 497 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 BRICD5Q6PL45 260 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 NFXL1Q6ZNB6 911 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 USP43Q70EL4 1123 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 SPRED1Q7Z699 444 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 FCHSD1Q86WN1 690 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 TRIM42Q8IWZ5 723 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 DZIP1LQ8IYY4 767 aaKnown RBP0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 ELOA3Q8NG57 546 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 AGBL1Q96MI9 1066 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 CDK15Q96Q40 435 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 DIRC2Q96SL1 478 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 OSBPL1AQ9BXW6 950 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 ADGRE3Q9BY15 652 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 NSUN3Q9H649 340 aaKnown RBP0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 ZNF395Q9H8N7 513 aaPredicted RBP0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 AKTIPQ9H8T0 292 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 PRDM6Q9NQX0 595 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 STRN4Q9NRL3 753 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 PGPEP1Q9NXJ5 209 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 CRCT1Q9UGL9 99 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 PRR12Q9ULL5 1215 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 SLC5A6Q9Y289 635 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 SLC27A5Q9Y2P5 690 aa0.15□□□□□ -2.39
SYNGAP1-225ENST00000637911 INO80B-WBP1J3KQ70 363 aa0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 RFXAPO00287 272 aa0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 CYP26A1O43174 497 aa0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 LILRB5O75023 590 aa0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 DXOO77932 396 aaKnown RBP0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 NID1P14543 1247 aa0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 GLB1P16278 677 aa0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 ZNF20P17024 532 aa0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 KCNA4P22459 653 aa0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 GLDCP23378 1020 aa0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 ZFP36P26651 326 aaKnown RBP0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 ATP6V1AP38606 617 aa0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 CEBPAP49715 358 aaPredicted RBP0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 PCBP4P57723 403 aaKnown RBP0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 SSBP2P81877 361 aaPredicted RBP0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 RTP5Q14D33 572 aa0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 ZNF385BQ569K4 471 aa0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 UBXN11Q5T124 520 aa0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 FBXL22Q6P050 247 aa0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 LARP1Q6PKG0 1096 aaKnown RBP0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 C8orf86Q6ZUL3 223 aa0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 FRMD5Q7Z6J6 570 aa0.14□□□□□ -2.39
SYNGAP1-225ENST00000637911 SP8Q8IXZ3 490 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms