RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 NBPF10Q6P3W6 841 aaKnown RBP17.32■□□□□ 0.36
SYNGAP1-224ENST00000637721 NBPF5PQ86XG9 351 aaPredicted RBP17.32■□□□□ 0.36
SYNGAP1-224ENST00000637721 NBPF15Q8N660 670 aa17.32■□□□□ 0.36
SYNGAP1-224ENST00000637721 COL11A2P13942 1736 aaPredicted RBP17.32■□□□□ 0.36
SYNGAP1-224ENST00000637721 TNRC6CQ9HCJ0 1690 aaKnown RBP17.32■□□□□ 0.36
SYNGAP1-224ENST00000637721 ARFGEF2Q9Y6D5 1785 aa17.31■□□□□ 0.36
SYNGAP1-224ENST00000637721 PIP4K2AP48426 406 aaPredicted RBP17.31■□□□□ 0.36
SYNGAP1-224ENST00000637721 EIF4A1P60842 406 aaKnown RBP17.31■□□□□ 0.36
SYNGAP1-224ENST00000637721 TPTE2Q6XPS3 522 aa17.31■□□□□ 0.36
SYNGAP1-224ENST00000637721 C16orf71Q8IYS4 520 aaPredicted RBP17.31■□□□□ 0.36
SYNGAP1-224ENST00000637721 MASTLQ96GX5 879 aa17.31■□□□□ 0.36
SYNGAP1-224ENST00000637721 MIS18AQ9NYP9 233 aa17.31■□□□□ 0.36
SYNGAP1-224ENST00000637721 ERBB4Q15303 1308 aa17.3■□□□□ 0.36
SYNGAP1-224ENST00000637721 ERVV-1B6SEH8 477 aa17.3■□□□□ 0.36
SYNGAP1-224ENST00000637721 RBM46Q8TBY0 533 aaKnown RBP17.3■□□□□ 0.36
SYNGAP1-224ENST00000637721 NMRK2Q9NPI5 230 aa17.3■□□□□ 0.36
SYNGAP1-224ENST00000637721 NIP7Q9Y221 180 aaKnown RBP eCLIP17.3■□□□□ 0.36
SYNGAP1-224ENST00000637721 CCDC88AQ3V6T2 1871 aa17.3■□□□□ 0.36
SYNGAP1-224ENST00000637721 FER1L6Q2WGJ9 1857 aa17.29■□□□□ 0.36
SYNGAP1-224ENST00000637721 SRGNP10124 158 aa17.29■□□□□ 0.36
SYNGAP1-224ENST00000637721 RIPK4P57078 832 aa17.29■□□□□ 0.36
SYNGAP1-224ENST00000637721 RASSF7Q02833 373 aa17.29■□□□□ 0.36
SYNGAP1-224ENST00000637721 DDX10Q13206 875 aaKnown RBP17.29■□□□□ 0.36
SYNGAP1-224ENST00000637721 DICER1Q9UPY3 1922 aaKnown RBP17.29■□□□□ 0.36
SYNGAP1-224ENST00000637721 LTBP3Q9NS15 1303 aa17.28■□□□□ 0.36
SYNGAP1-224ENST00000637721 KLRG2A4D1S0 409 aaPredicted RBP17.28■□□□□ 0.36
SYNGAP1-224ENST00000637721 NFKBIEO00221 500 aa17.28■□□□□ 0.36
SYNGAP1-224ENST00000637721 APLP1P51693 650 aa17.28■□□□□ 0.36
SYNGAP1-224ENST00000637721 TIAM2Q8IVF5 1701 aa17.27■□□□□ 0.36
SYNGAP1-224ENST00000637721 NUP98P52948 1817 aa17.27■□□□□ 0.36
SYNGAP1-224ENST00000637721 FSTL1Q12841 308 aa17.27■□□□□ 0.36
SYNGAP1-224ENST00000637721 KIF6Q6ZMV9 814 aa17.27■□□□□ 0.36
SYNGAP1-224ENST00000637721 NYXQ9GZU5 481 aa17.27■□□□□ 0.36
SYNGAP1-224ENST00000637721 TSPYL4Q9UJ04 414 aa17.27■□□□□ 0.36
SYNGAP1-224ENST00000637721 MAP3K15Q6ZN16 1313 aa17.26■□□□□ 0.35
SYNGAP1-224ENST00000637721 GLTPD2A6NH11 291 aa17.26■□□□□ 0.35
SYNGAP1-224ENST00000637721 C21orf2O43822 256 aa17.26■□□□□ 0.35
SYNGAP1-224ENST00000637721 NPR1P16066 1061 aa17.26■□□□□ 0.35
SYNGAP1-224ENST00000637721 TMPOP42166 694 aaKnown RBP17.26■□□□□ 0.35
SYNGAP1-224ENST00000637721 CCDC24Q8N4L8 307 aa17.26■□□□□ 0.35
SYNGAP1-224ENST00000637721 THUMPD2Q9BTF0 503 aaKnown RBP17.26■□□□□ 0.35
SYNGAP1-224ENST00000637721 CACNA1SQ13698 1873 aa17.25■□□□□ 0.35
SYNGAP1-224ENST00000637721 PRPF40BQ6NWY9 871 aaKnown RBP17.25■□□□□ 0.35
SYNGAP1-224ENST00000637721 TAOK3Q9H2K8 898 aa17.25■□□□□ 0.35
SYNGAP1-224ENST00000637721 SLX4Q8IY92 1834 aa17.25■□□□□ 0.35
SYNGAP1-224ENST00000637721 IBTKQ9P2D0 1353 aaPredicted RBP17.25■□□□□ 0.35
SYNGAP1-224ENST00000637721 GTF2E1P29083 439 aaPredicted RBP17.24■□□□□ 0.35
SYNGAP1-224ENST00000637721 ALDH1B1P30837 517 aa17.24■□□□□ 0.35
SYNGAP1-224ENST00000637721 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.35
SYNGAP1-224ENST00000637721 HLFQ16534 295 aa17.24■□□□□ 0.35
SYNGAP1-224ENST00000637721 DPY19L2Q6NUT2 758 aa17.24■□□□□ 0.35
SYNGAP1-224ENST00000637721 RRAGCQ9HB90 399 aa17.24■□□□□ 0.35
SYNGAP1-224ENST00000637721 RRP7AQ9Y3A4 280 aaKnown RBP17.24■□□□□ 0.35
SYNGAP1-224ENST00000637721 ZNF316A6NFI3 1004 aaPredicted RBP17.23■□□□□ 0.35
SYNGAP1-224ENST00000637721 PRELPP51888 382 aa17.23■□□□□ 0.35
SYNGAP1-224ENST00000637721 RUNDC1Q96C34 613 aa17.23■□□□□ 0.35
SYNGAP1-224ENST00000637721 MYL6BP14649 208 aa17.22■□□□□ 0.35
SYNGAP1-224ENST00000637721 VEGFAP15692 232 aaPredicted RBP17.22■□□□□ 0.35
SYNGAP1-224ENST00000637721 ERFEQ4G0M1 354 aa17.22■□□□□ 0.35
SYNGAP1-224ENST00000637721 CCDC93Q567U6 631 aa17.22■□□□□ 0.35
SYNGAP1-224ENST00000637721 RIC1Q4ADV7 1423 aa17.21■□□□□ 0.35
SYNGAP1-224ENST00000637721 NGEFQ8N5V2 710 aa17.21■□□□□ 0.35
SYNGAP1-224ENST00000637721 SMC1BQ8NDV3 1235 aa17.21■□□□□ 0.35
SYNGAP1-224ENST00000637721 ZNF219Q9P2Y4 722 aaPredicted RBP17.21■□□□□ 0.35
SYNGAP1-224ENST00000637721 WDR90Q96KV7 1748 aa17.21■□□□□ 0.35
SYNGAP1-224ENST00000637721 GIGYF2Q6Y7W6 1299 aaKnown RBP17.2■□□□□ 0.34
SYNGAP1-224ENST00000637721 TTLL7Q6ZT98 887 aa17.2■□□□□ 0.34
SYNGAP1-224ENST00000637721 RTKN2Q8IZC4 609 aa17.2■□□□□ 0.34
SYNGAP1-224ENST00000637721 C7orf43Q8WVR3 580 aa17.2■□□□□ 0.34
SYNGAP1-224ENST00000637721 PRKRIP1Q9H875 184 aaPredicted RBP17.2■□□□□ 0.34
SYNGAP1-224ENST00000637721 FAM177BA6PVY3 158 aa17.19■□□□□ 0.34
SYNGAP1-224ENST00000637721 CRY2Q49AN0 593 aa17.19■□□□□ 0.34
SYNGAP1-224ENST00000637721 PARP10Q53GL7 1025 aa17.19■□□□□ 0.34
SYNGAP1-224ENST00000637721 EIF2S2P20042 333 aaKnown RBP17.18■□□□□ 0.34
SYNGAP1-224ENST00000637721 FKBP4Q02790 459 aaKnown RBP eCLIP17.18■□□□□ 0.34
SYNGAP1-224ENST00000637721 GRIPAP1Q4V328 841 aa17.18■□□□□ 0.34
SYNGAP1-224ENST00000637721 CC2D2BQ6DHV5 1058 aa17.18■□□□□ 0.34
SYNGAP1-224ENST00000637721 PPP1R42Q7Z4L9 355 aa17.18■□□□□ 0.34
SYNGAP1-224ENST00000637721 ZNF34Q8IZ26 560 aa17.18■□□□□ 0.34
SYNGAP1-224ENST00000637721 ZBTB3Q9H5J0 574 aa17.18■□□□□ 0.34
SYNGAP1-224ENST00000637721 RNF123Q5XPI4 1314 aa17.18■□□□□ 0.34
SYNGAP1-224ENST00000637721 CHL1O00533 1208 aa17.17■□□□□ 0.34
SYNGAP1-224ENST00000637721 HOXB7P09629 217 aa17.17■□□□□ 0.34
SYNGAP1-224ENST00000637721 PDIA6Q15084 440 aa17.17■□□□□ 0.34
SYNGAP1-224ENST00000637721 NEUROD2Q15784 382 aa17.17■□□□□ 0.34
SYNGAP1-224ENST00000637721 HSP90AB3PQ58FF7 597 aa17.17■□□□□ 0.34
SYNGAP1-224ENST00000637721 LRP10Q7Z4F1 713 aa17.17■□□□□ 0.34
SYNGAP1-224ENST00000637721 CCDC146Q8IYE0 955 aa17.17■□□□□ 0.34
SYNGAP1-224ENST00000637721 HOXA10P31260 410 aaPredicted RBP17.16■□□□□ 0.34
SYNGAP1-224ENST00000637721 ADAMTS8Q9UP79 889 aa17.16■□□□□ 0.34
SYNGAP1-224ENST00000637721 TRIM35Q9UPQ4 493 aa17.16■□□□□ 0.34
SYNGAP1-224ENST00000637721 PCNTO95613 3336 aa17.16■□□□□ 0.34
SYNGAP1-224ENST00000637721 UBN2Q6ZU65 1347 aa17.16■□□□□ 0.34
SYNGAP1-224ENST00000637721 ABCC12Q96J65 1359 aa17.15■□□□□ 0.34
SYNGAP1-224ENST00000637721 GPTP24298 496 aa17.15■□□□□ 0.34
SYNGAP1-224ENST00000637721 NUTM1Q86Y26 1132 aa17.15■□□□□ 0.34
SYNGAP1-224ENST00000637721 RPGRQ92834 1020 aaKnown RBP17.15■□□□□ 0.34
SYNGAP1-224ENST00000637721 NTSR2O95665 410 aa17.14■□□□□ 0.33
SYNGAP1-224ENST00000637721 SUSD4Q5VX71 490 aa17.14■□□□□ 0.33
SYNGAP1-224ENST00000637721 DNAJC5GQ8N7S2 189 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms