RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 HMOX1P09601 288 aa8.84□□□□□ -0.99
UPF3B-205ENST00000636792 CALD1Q05682 793 aaKnown RBP8.84□□□□□ -0.99
UPF3B-205ENST00000636792 NFE2L2Q16236 605 aa8.84□□□□□ -0.99
UPF3B-205ENST00000636792 DDB1Q16531 1140 aa8.84□□□□□ -0.99
UPF3B-205ENST00000636792 C1orf141Q5JVX7 400 aa8.84□□□□□ -0.99
UPF3B-205ENST00000636792 AEBP1Q8IUX7 1158 aa8.84□□□□□ -0.99
UPF3B-205ENST00000636792 IFNL2Q8IZJ0 200 aa8.84□□□□□ -0.99
UPF3B-205ENST00000636792 ZCRB1Q8TBF4 217 aaKnown RBP8.84□□□□□ -0.99
UPF3B-205ENST00000636792 WBP1LQ9NX94 342 aa8.84□□□□□ -0.99
UPF3B-205ENST00000636792 CEMIPQ8WUJ3 1361 aa8.84□□□□□ -0.99
UPF3B-205ENST00000636792 MFSD10Q14728 455 aa8.83□□□□□ -1
UPF3B-205ENST00000636792 USHBP1Q8N6Y0 703 aa8.83□□□□□ -1
UPF3B-205ENST00000636792 USP35Q9P2H5 1018 aa8.83□□□□□ -1
UPF3B-205ENST00000636792 RGS17Q9UGC6 210 aaPredicted RBP8.83□□□□□ -1
UPF3B-205ENST00000636792 KDM3BQ7LBC6 1761 aa8.83□□□□□ -1
UPF3B-205ENST00000636792 UBR2Q8IWV8 1755 aa8.82□□□□□ -1
UPF3B-205ENST00000636792 GNAT3A8MTJ3 354 aa8.82□□□□□ -1
UPF3B-205ENST00000636792 PHKG2P15735 406 aa8.82□□□□□ -1
UPF3B-205ENST00000636792 TMPOP42166 694 aaKnown RBP8.82□□□□□ -1
UPF3B-205ENST00000636792 FAM98CQ17RN3 349 aaKnown RBP8.82□□□□□ -1
UPF3B-205ENST00000636792 ZNF530Q6P9A1 599 aaPredicted RBP8.82□□□□□ -1
UPF3B-205ENST00000636792 FAM9BQ8IZU0 186 aa8.82□□□□□ -1
UPF3B-205ENST00000636792 DCAF5Q96JK2 942 aa8.82□□□□□ -1
UPF3B-205ENST00000636792 TNS1Q9HBL0 1735 aaKnown RBP8.81□□□□□ -1
UPF3B-205ENST00000636792 PDE3BQ13370 1112 aa8.81□□□□□ -1
UPF3B-205ENST00000636792 SEPT12Q8IYM1 358 aa8.81□□□□□ -1
UPF3B-205ENST00000636792 RTF1Q92541 710 aaKnown RBP8.81□□□□□ -1
UPF3B-205ENST00000636792 EMILIN3Q9NT22 766 aa8.81□□□□□ -1
UPF3B-205ENST00000636792 BABAM1Q9NWV8 329 aa8.81□□□□□ -1
UPF3B-205ENST00000636792 IL16Q14005 1332 aa8.8□□□□□ -1
UPF3B-205ENST00000636792 KDM6AO15550 1401 aaPredicted RBP8.8□□□□□ -1
UPF3B-205ENST00000636792 BTAF1O14981 1849 aa8.8□□□□□ -1
UPF3B-205ENST00000636792 ERVV-2B6SEH9 535 aa8.8□□□□□ -1
UPF3B-205ENST00000636792 CYP27B1O15528 508 aa8.8□□□□□ -1
UPF3B-205ENST00000636792 HMGB2P26583 209 aaKnown RBP8.8□□□□□ -1
UPF3B-205ENST00000636792 MTHFSDQ2M296 383 aaKnown RBP8.8□□□□□ -1
UPF3B-205ENST00000636792 POTEAQ6S8J7 498 aa8.8□□□□□ -1
UPF3B-205ENST00000636792 EPAS1Q99814 870 aa8.8□□□□□ -1
UPF3B-205ENST00000636792 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.8□□□□□ -1
UPF3B-205ENST00000636792 SEPT9Q9UHD8 586 aaPredicted RBP8.8□□□□□ -1
UPF3B-205ENST00000636792 TSR3Q9UJK0 312 aaKnown RBP8.8□□□□□ -1
UPF3B-205ENST00000636792 ZBED9Q6R2W3 1325 aa8.8□□□□□ -1
UPF3B-205ENST00000636792 LAMB4A4D0S4 1761 aa8.79□□□□□ -1
UPF3B-205ENST00000636792 MYT1Q01538 1121 aa8.79□□□□□ -1
UPF3B-205ENST00000636792 KRT27Q7Z3Y8 459 aa8.79□□□□□ -1
UPF3B-205ENST00000636792 LRCH3Q96II8 777 aa8.79□□□□□ -1
UPF3B-205ENST00000636792 PHACTR3Q96KR7 559 aa8.79□□□□□ -1
UPF3B-205ENST00000636792 LY75O60449 1722 aa8.79□□□□□ -1
UPF3B-205ENST00000636792 ZNF521Q96K83 1311 aa8.79□□□□□ -1
UPF3B-205ENST00000636792 APAF1O14727 1248 aa8.78□□□□□ -1
UPF3B-205ENST00000636792 RIPK4P57078 832 aa8.78□□□□□ -1
UPF3B-205ENST00000636792 C6orf132Q5T0Z8 1188 aa8.78□□□□□ -1
UPF3B-205ENST00000636792 FAM196AQ6ZSG2 479 aa8.78□□□□□ -1
UPF3B-205ENST00000636792 WDR63Q8IWG1 891 aa8.78□□□□□ -1
UPF3B-205ENST00000636792 HPS5Q9UPZ3 1129 aa8.78□□□□□ -1
UPF3B-205ENST00000636792 CACNA1FO60840 1977 aa8.78□□□□□ -1
UPF3B-205ENST00000636792 SOS1Q07889 1333 aaPredicted RBP8.78□□□□□ -1
UPF3B-205ENST00000636792 TRIM6-TRIM34B2RNG4 842 aa8.77□□□□□ -1.01
UPF3B-205ENST00000636792 RNMTO43148 476 aaKnown RBP8.77□□□□□ -1.01
UPF3B-205ENST00000636792 GTPBP6O43824 516 aaPredicted RBP8.77□□□□□ -1.01
UPF3B-205ENST00000636792 TEFQ10587 303 aa8.77□□□□□ -1.01
UPF3B-205ENST00000636792 CCDC146Q8IYE0 955 aa8.77□□□□□ -1.01
UPF3B-205ENST00000636792 MARCH10Q8NA82 808 aaPredicted RBP8.77□□□□□ -1.01
UPF3B-205ENST00000636792 KAT6BQ8WYB5 2073 aa8.77□□□□□ -1.01
UPF3B-205ENST00000636792 GFRA3O60609 400 aa8.76□□□□□ -1.01
UPF3B-205ENST00000636792 WWC1Q8IX03 1113 aa8.76□□□□□ -1.01
UPF3B-205ENST00000636792 DDX54Q8TDD1 881 aaKnown RBP8.76□□□□□ -1.01
UPF3B-205ENST00000636792 CHMP4AQ9BY43 222 aa8.76□□□□□ -1.01
UPF3B-205ENST00000636792 SLC52A2Q9HAB3 445 aa8.76□□□□□ -1.01
UPF3B-205ENST00000636792 IFT57Q9NWB7 429 aa8.76□□□□□ -1.01
UPF3B-205ENST00000636792 C5P01031 1676 aa8.75□□□□□ -1.01
UPF3B-205ENST00000636792 COL5A3P25940 1745 aaPredicted RBP8.75□□□□□ -1.01
UPF3B-205ENST00000636792 GNAI1P63096 354 aa8.75□□□□□ -1.01
UPF3B-205ENST00000636792 HNRNPUQ00839 825 aaKnown RBP eCLIP8.75□□□□□ -1.01
UPF3B-205ENST00000636792 TRAF7Q6Q0C0 670 aa8.75□□□□□ -1.01
UPF3B-205ENST00000636792 MYH16Q9H6N6 1097 aa8.75□□□□□ -1.01
UPF3B-205ENST00000636792 TMOD3Q9NYL9 352 aa8.75□□□□□ -1.01
UPF3B-205ENST00000636792 TAF1LQ8IZX4 1826 aa8.75□□□□□ -1.01
UPF3B-205ENST00000636792 RREB1Q92766 1687 aa8.75□□□□□ -1.01
UPF3B-205ENST00000636792 E9PSI1 815 aa8.74□□□□□ -1.01
UPF3B-205ENST00000636792 TAF7Q15545 349 aaPredicted RBP8.74□□□□□ -1.01
UPF3B-205ENST00000636792 CCDC125Q86Z20 511 aa8.74□□□□□ -1.01
UPF3B-205ENST00000636792 IL17REQ8NFR9 667 aa8.74□□□□□ -1.01
UPF3B-205ENST00000636792 SMARCC1Q92922 1105 aaPredicted RBP8.74□□□□□ -1.01
UPF3B-205ENST00000636792 CFAP44Q96MT7 982 aa8.74□□□□□ -1.01
UPF3B-205ENST00000636792 KCPQ6ZWJ8 1503 aa8.74□□□□□ -1.01
UPF3B-205ENST00000636792 HOXB7P09629 217 aa8.73□□□□□ -1.01
UPF3B-205ENST00000636792 ZNF853P0CG23 659 aa8.73□□□□□ -1.01
UPF3B-205ENST00000636792 CABP4P57796 275 aa8.73□□□□□ -1.01
UPF3B-205ENST00000636792 MPRIPQ6WCQ1 1025 aa8.73□□□□□ -1.01
UPF3B-205ENST00000636792 TJP1Q07157 1748 aa8.73□□□□□ -1.01
UPF3B-205ENST00000636792 QSER1Q2KHR3 1735 aa8.73□□□□□ -1.01
UPF3B-205ENST00000636792 CT47B1P0C2W7 299 aaPredicted RBP8.72□□□□□ -1.01
UPF3B-205ENST00000636792 PPP4CP60510 307 aa8.72□□□□□ -1.01
UPF3B-205ENST00000636792 NEUROD2Q15784 382 aa8.72□□□□□ -1.01
UPF3B-205ENST00000636792 MCM10Q7L590 875 aa8.72□□□□□ -1.01
UPF3B-205ENST00000636792 PACS2Q86VP3 889 aa8.72□□□□□ -1.01
UPF3B-205ENST00000636792 VSIG10Q8N0Z9 540 aa8.72□□□□□ -1.01
UPF3B-205ENST00000636792 ZNF428Q96B54 188 aa8.72□□□□□ -1.01
UPF3B-205ENST00000636792 RRP7AQ9Y3A4 280 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms