RNA–Protein interactions for RNA: ENST00000636520.1

CLN5-210, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 5,889 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-210ENST00000636520 DEFB115Q30KQ5 88 aa8.31□□□□□ -1.08
CLN5-210ENST00000636520 MYD88Q99836 296 aa8.31□□□□□ -1.08
CLN5-210ENST00000636520 ZBED2Q9BTP6 218 aa8.31□□□□□ -1.08
CLN5-210ENST00000636520 TAF12Q16514 161 aa8.31□□□□□ -1.08
CLN5-210ENST00000636520 SPOUT1Q5T280 376 aaKnown RBP8.31□□□□□ -1.08
CLN5-210ENST00000636520 KRT26Q7Z3Y9 468 aa8.31□□□□□ -1.08
CLN5-210ENST00000636520 RNF216Q9NWF9 866 aaPredicted RBP8.31□□□□□ -1.08
CLN5-210ENST00000636520 PTCH1Q13635 1447 aa8.31□□□□□ -1.08
CLN5-210ENST00000636520 ATP5J2-PTCD1G3V325 749 aa8.31□□□□□ -1.08
CLN5-210ENST00000636520 PUS7Q96PZ0 661 aaKnown RBP8.31□□□□□ -1.08
CLN5-210ENST00000636520 PLEKHG3A1L390 1219 aa8.31□□□□□ -1.08
CLN5-210ENST00000636520 M0QZ92 97 aa8.31□□□□□ -1.08
CLN5-210ENST00000636520 TTC6Q86TZ1 520 aa8.31□□□□□ -1.08
CLN5-210ENST00000636520 NRDCO43847 1150 aa8.3□□□□□ -1.08
CLN5-210ENST00000636520 ATP2B4P23634 1241 aa8.3□□□□□ -1.08
CLN5-210ENST00000636520 EIF5P55010 431 aaKnown RBP8.3□□□□□ -1.08
CLN5-210ENST00000636520 L1TD1Q5T7N2 865 aaKnown RBP8.3□□□□□ -1.08
CLN5-210ENST00000636520 LRSAM1Q6UWE0 723 aa8.3□□□□□ -1.08
CLN5-210ENST00000636520 CDC37L1Q7L3B6 337 aa8.3□□□□□ -1.08
CLN5-210ENST00000636520 REM2Q8IYK8 340 aaPredicted RBP8.3□□□□□ -1.08
CLN5-210ENST00000636520 ZFYVE28Q9HCC9 887 aa8.3□□□□□ -1.08
CLN5-210ENST00000636520 PNMA2Q9UL42 364 aa8.3□□□□□ -1.08
CLN5-210ENST00000636520 RAD50Q92878 1312 aa8.3□□□□□ -1.08
CLN5-210ENST00000636520 ADGRL3Q9HAR2 1447 aa8.3□□□□□ -1.08
CLN5-210ENST00000636520 GTPBP6O43824 516 aaPredicted RBP8.3□□□□□ -1.08
CLN5-210ENST00000636520 MYCP01106 439 aaPredicted RBP8.3□□□□□ -1.08
CLN5-210ENST00000636520 BARGINQ6ZT62 677 aa8.3□□□□□ -1.08
CLN5-210ENST00000636520 ANKRD13DQ6ZTN6 518 aa8.3□□□□□ -1.08
CLN5-210ENST00000636520 ABCC5O15440 1437 aa8.3□□□□□ -1.08
CLN5-210ENST00000636520 UQCRFS1P1P0C7P4 283 aa8.3□□□□□ -1.08
CLN5-210ENST00000636520 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.3□□□□□ -1.08
CLN5-210ENST00000636520 RPS6KA4O75676 772 aa8.3□□□□□ -1.08
CLN5-210ENST00000636520 IDH1O75874 414 aaKnown RBP8.3□□□□□ -1.08
CLN5-210ENST00000636520 DHX37Q8IY37 1157 aaKnown RBP8.3□□□□□ -1.08
CLN5-210ENST00000636520 CCT4P50991 539 aaKnown RBP8.29□□□□□ -1.08
CLN5-210ENST00000636520 FHDC1Q9C0D6 1143 aaPredicted RBP8.29□□□□□ -1.08
CLN5-210ENST00000636520 RALGAPBQ86X10 1494 aa8.29□□□□□ -1.08
CLN5-210ENST00000636520 APBB1IPQ7Z5R6 666 aaPredicted RBP8.29□□□□□ -1.08
CLN5-210ENST00000636520 PLCD3Q8N3E9 789 aa8.29□□□□□ -1.08
CLN5-210ENST00000636520 SLKQ9H2G2 1235 aaPredicted RBP8.29□□□□□ -1.08
CLN5-210ENST00000636520 E9PSI1 815 aa8.29□□□□□ -1.08
CLN5-210ENST00000636520 ZKSCAN2Q63HK3 967 aa8.29□□□□□ -1.08
CLN5-210ENST00000636520 POTEAQ6S8J7 498 aa8.29□□□□□ -1.08
CLN5-210ENST00000636520 RETREG2Q8NC44 543 aa8.29□□□□□ -1.08
CLN5-210ENST00000636520 MKRN1Q9UHC7 482 aaKnown RBP8.29□□□□□ -1.08
CLN5-210ENST00000636520 TLR3O15455 904 aaKnown RBP8.28□□□□□ -1.08
CLN5-210ENST00000636520 DPP9Q86TI2 863 aa8.28□□□□□ -1.08
CLN5-210ENST00000636520 APOBEC3FQ8IUX4 373 aaKnown RBP8.28□□□□□ -1.08
CLN5-210ENST00000636520 CNPY2Q9Y2B0 182 aa8.28□□□□□ -1.08
CLN5-210ENST00000636520 PCF11O94913 1555 aaKnown RBP8.28□□□□□ -1.08
CLN5-210ENST00000636520 RRP12Q5JTH9 1297 aaKnown RBP8.28□□□□□ -1.08
CLN5-210ENST00000636520 CRNKL1Q9BZJ0 848 aaKnown RBP8.28□□□□□ -1.08
CLN5-210ENST00000636520 SBNO1A3KN83 1393 aa8.28□□□□□ -1.08
CLN5-210ENST00000636520 MYO3BQ8WXR4 1341 aa8.28□□□□□ -1.08
CLN5-210ENST00000636520 HIP1O00291 1037 aa8.28□□□□□ -1.08
CLN5-210ENST00000636520 SURF6O75683 361 aaKnown RBP8.28□□□□□ -1.08
CLN5-210ENST00000636520 SLC4A2P04920 1241 aa8.28□□□□□ -1.08
CLN5-210ENST00000636520 USPL1Q5W0Q7 1092 aa8.28□□□□□ -1.08
CLN5-210ENST00000636520 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.28□□□□□ -1.08
CLN5-210ENST00000636520 C21orf2O43822 256 aa8.28□□□□□ -1.08
CLN5-210ENST00000636520 GADL1Q6ZQY3 521 aa8.28□□□□□ -1.08
CLN5-210ENST00000636520 NKX2-3Q8TAU0 364 aa8.28□□□□□ -1.08
CLN5-210ENST00000636520 ERO1AQ96HE7 468 aa8.28□□□□□ -1.08
CLN5-210ENST00000636520 ARHGEF10LQ9HCE6 1279 aa8.28□□□□□ -1.08
CLN5-210ENST00000636520 CCDC178Q5BJE1 867 aa8.28□□□□□ -1.08
CLN5-210ENST00000636520 PZPP20742 1482 aa8.27□□□□□ -1.08
CLN5-210ENST00000636520 TTC37Q6PGP7 1564 aa8.27□□□□□ -1.09
CLN5-210ENST00000636520 TWISTNBQ3B726 338 aaPredicted RBP8.27□□□□□ -1.09
CLN5-210ENST00000636520 UBAC1Q9BSL1 405 aa8.27□□□□□ -1.09
CLN5-210ENST00000636520 AP5M1Q9H0R1 490 aa8.27□□□□□ -1.09
CLN5-210ENST00000636520 FAM50BQ9Y247 325 aa8.27□□□□□ -1.09
CLN5-210ENST00000636520 IRS4O14654 1257 aaPredicted RBP8.27□□□□□ -1.09
CLN5-210ENST00000636520 TOMM70O94826 608 aa8.27□□□□□ -1.09
CLN5-210ENST00000636520 KIF4AO95239 1232 aa8.27□□□□□ -1.09
CLN5-210ENST00000636520 FKBP4Q02790 459 aaKnown RBP eCLIP8.27□□□□□ -1.09
CLN5-210ENST00000636520 NOGQ13253 232 aa8.27□□□□□ -1.09
CLN5-210ENST00000636520 LRRCC1Q9C099 1032 aa8.27□□□□□ -1.09
CLN5-210ENST00000636520 IGSF1Q8N6C5 1336 aa8.27□□□□□ -1.09
CLN5-210ENST00000636520 LDHBP07195 334 aaKnown RBP8.27□□□□□ -1.09
CLN5-210ENST00000636520 DNAJC10Q8IXB1 793 aa8.27□□□□□ -1.09
CLN5-210ENST00000636520 PPEF1O14829 653 aaPredicted RBP8.27□□□□□ -1.09
CLN5-210ENST00000636520 HOXC9P31274 260 aa8.27□□□□□ -1.09
CLN5-210ENST00000636520 FAM47CQ5HY64 1035 aa8.27□□□□□ -1.09
CLN5-210ENST00000636520 MFSD14CQ5VZR4 134 aa8.27□□□□□ -1.09
CLN5-210ENST00000636520 WDR66Q8TBY9 1149 aa8.27□□□□□ -1.09
CLN5-210ENST00000636520 SEC63Q9UGP8 760 aaKnown RBP8.27□□□□□ -1.09
CLN5-210ENST00000636520 MYBBP1AQ9BQG0 1328 aaKnown RBP8.27□□□□□ -1.09
CLN5-210ENST00000636520 NKTRP30414 1462 aaKnown RBP8.27□□□□□ -1.09
CLN5-210ENST00000636520 NSD2O96028 1365 aa8.26□□□□□ -1.09
CLN5-210ENST00000636520 CELF2O95319 508 aaKnown RBP8.26□□□□□ -1.09
CLN5-210ENST00000636520 TTF1Q15361 905 aaPredicted RBP8.26□□□□□ -1.09
CLN5-210ENST00000636520 TAF1CQ15572 869 aaPredicted RBP8.26□□□□□ -1.09
CLN5-210ENST00000636520 EMILIN1Q9Y6C2 1016 aa8.26□□□□□ -1.09
CLN5-210ENST00000636520 KDM5CP41229 1560 aa8.26□□□□□ -1.09
CLN5-210ENST00000636520 DESP17661 470 aa8.26□□□□□ -1.09
CLN5-210ENST00000636520 CHADLQ6NUI6 762 aa8.26□□□□□ -1.09
CLN5-210ENST00000636520 PALLDQ8WX93 1383 aa8.26□□□□□ -1.09
CLN5-210ENST00000636520 MAP3K5Q99683 1374 aa8.26□□□□□ -1.09
CLN5-210ENST00000636520 RPS8P62241 208 aaKnown RBP8.26□□□□□ -1.09
CLN5-210ENST00000636520 PDE4BQ07343 736 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms