RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 SCN7AQ01118 1682 aa19.44■□□□□ 0.7
CLN8-209ENST00000635970 TRAPPC3LQ5T215 181 aa19.44■□□□□ 0.7
CLN8-209ENST00000635970 BCORQ6W2J9 1755 aa19.43■□□□□ 0.7
CLN8-209ENST00000635970 COL24A1Q17RW2 1714 aa19.43■□□□□ 0.7
CLN8-209ENST00000635970 EIF5P55010 431 aaKnown RBP19.43■□□□□ 0.7
CLN8-209ENST00000635970 FLAD1Q8NFF5 587 aa19.43■□□□□ 0.7
CLN8-209ENST00000635970 MYH16Q9H6N6 1097 aa19.43■□□□□ 0.7
CLN8-209ENST00000635970 ANXA1P04083 346 aa19.42■□□□□ 0.7
CLN8-209ENST00000635970 MYL6BP14649 208 aa19.42■□□□□ 0.7
CLN8-209ENST00000635970 HDGFL1Q5TGJ6 251 aa19.42■□□□□ 0.7
CLN8-209ENST00000635970 MSL1Q68DK7 614 aa19.42■□□□□ 0.7
CLN8-209ENST00000635970 SRP68Q9UHB9 627 aaKnown RBP19.42■□□□□ 0.7
CLN8-209ENST00000635970 ADRA2BP18089 450 aa19.41■□□□□ 0.7
CLN8-209ENST00000635970 IL6STP40189 918 aaPredicted RBP19.41■□□□□ 0.7
CLN8-209ENST00000635970 EXOSC9Q06265 439 aaKnown RBP19.41■□□□□ 0.7
CLN8-209ENST00000635970 PROSER3Q2NL68 480 aa19.41■□□□□ 0.7
CLN8-209ENST00000635970 CLUAP1Q96AJ1 413 aa19.41■□□□□ 0.7
CLN8-209ENST00000635970 HOXB7P09629 217 aa19.41■□□□□ 0.7
CLN8-209ENST00000635970 RFC4P35249 363 aa19.41■□□□□ 0.7
CLN8-209ENST00000635970 ATF5Q9Y2D1 282 aaPredicted RBP19.41■□□□□ 0.7
CLN8-209ENST00000635970 RTN4Q9NQC3 1192 aaKnown RBP19.4■□□□□ 0.7
CLN8-209ENST00000635970 USP42Q9H9J4 1324 aaKnown RBP19.39■□□□□ 0.7
CLN8-209ENST00000635970 FRAT2O75474 233 aaPredicted RBP19.39■□□□□ 0.7
CLN8-209ENST00000635970 BCAR3O75815 825 aa19.39■□□□□ 0.7
CLN8-209ENST00000635970 PDIA6Q15084 440 aa19.39■□□□□ 0.7
CLN8-209ENST00000635970 TWISTNBQ3B726 338 aaPredicted RBP19.39■□□□□ 0.7
CLN8-209ENST00000635970 MTFR1LQ9H019 292 aa19.39■□□□□ 0.7
CLN8-209ENST00000635970 CHPF2Q9P2E5 772 aa19.39■□□□□ 0.7
CLN8-209ENST00000635970 BRPF3Q9ULD4 1205 aa19.39■□□□□ 0.7
CLN8-209ENST00000635970 LRP5O75197 1615 aa19.39■□□□□ 0.69
CLN8-209ENST00000635970 TBC1D2BQ9UPU7 963 aa19.39■□□□□ 0.69
CLN8-209ENST00000635970 ARXQ96QS3 562 aa19.38■□□□□ 0.69
CLN8-209ENST00000635970 USPL1Q5W0Q7 1092 aa19.37■□□□□ 0.69
CLN8-209ENST00000635970 LRP10Q7Z4F1 713 aa19.37■□□□□ 0.69
CLN8-209ENST00000635970 SLC16A10Q8TF71 515 aa19.37■□□□□ 0.69
CLN8-209ENST00000635970 ERBB4Q15303 1308 aa19.37■□□□□ 0.69
CLN8-209ENST00000635970 IGHDP01880 384 aa19.37■□□□□ 0.69
CLN8-209ENST00000635970 GYS1P13807 737 aa19.37■□□□□ 0.69
CLN8-209ENST00000635970 DZIP3Q86Y13 1208 aaKnown RBP19.36■□□□□ 0.69
CLN8-209ENST00000635970 FAM43AQ8N2R8 423 aa19.36■□□□□ 0.69
CLN8-209ENST00000635970 UPF2Q9HAU5 1272 aaKnown RBP19.36■□□□□ 0.69
CLN8-209ENST00000635970 NARFQ9UHQ1 456 aa19.36■□□□□ 0.69
CLN8-209ENST00000635970 NUP98P52948 1817 aa19.36■□□□□ 0.69
CLN8-209ENST00000635970 ZPR1O75312 459 aa19.35■□□□□ 0.69
CLN8-209ENST00000635970 PTGER2P43116 358 aa19.35■□□□□ 0.69
CLN8-209ENST00000635970 BCL2L12Q9HB09 334 aa19.35■□□□□ 0.69
CLN8-209ENST00000635970 SPON1Q9HCB6 807 aa19.35■□□□□ 0.69
CLN8-209ENST00000635970 A0A087WZG4 1122 aa19.34■□□□□ 0.69
CLN8-209ENST00000635970 VAMP4O75379 141 aa19.34■□□□□ 0.69
CLN8-209ENST00000635970 TTLL7Q6ZT98 887 aa19.34■□□□□ 0.69
CLN8-209ENST00000635970 DDX21Q9NR30 783 aaKnown RBP eCLIP19.34■□□□□ 0.69
CLN8-209ENST00000635970 SGIP1Q9BQI5 828 aa19.33■□□□□ 0.69
CLN8-209ENST00000635970 CAMTA2O94983 1202 aa19.33■□□□□ 0.68
CLN8-209ENST00000635970 DBF4Q9UBU7 674 aaPredicted RBP19.33■□□□□ 0.68
CLN8-209ENST00000635970 ARFGEF2Q9Y6D5 1785 aa19.32■□□□□ 0.68
CLN8-209ENST00000635970 AIMP1Q12904 312 aaKnown RBP19.32■□□□□ 0.68
CLN8-209ENST00000635970 CCDC30Q5VVM6 783 aa19.32■□□□□ 0.68
CLN8-209ENST00000635970 CACNA1FO60840 1977 aa19.32■□□□□ 0.68
CLN8-209ENST00000635970 L1TD1Q5T7N2 865 aaKnown RBP19.32■□□□□ 0.68
CLN8-209ENST00000635970 XAGE3Q8WTP9 111 aa19.32■□□□□ 0.68
CLN8-209ENST00000635970 ANKRD36CQ5JPF3 1778 aa19.31■□□□□ 0.68
CLN8-209ENST00000635970 COPS6Q7L5N1 327 aa19.31■□□□□ 0.68
CLN8-209ENST00000635970 ZBTB3Q9H5J0 574 aa19.31■□□□□ 0.68
CLN8-209ENST00000635970 PHAXQ9H814 394 aaKnown RBP19.31■□□□□ 0.68
CLN8-209ENST00000635970 AFDNP55196 1824 aaKnown RBP19.31■□□□□ 0.68
CLN8-209ENST00000635970 PRKCSHP14314 528 aaPredicted RBP19.3■□□□□ 0.68
CLN8-209ENST00000635970 HLFQ16534 295 aa19.3■□□□□ 0.68
CLN8-209ENST00000635970 MMP10P09238 476 aa19.3■□□□□ 0.68
CLN8-209ENST00000635970 KIF6Q6ZMV9 814 aa19.3■□□□□ 0.68
CLN8-209ENST00000635970 NLGN1Q8N2Q7 840 aa19.29■□□□□ 0.68
CLN8-209ENST00000635970 MAP3K15Q6ZN16 1313 aa19.29■□□□□ 0.68
CLN8-209ENST00000635970 POLD1P28340 1107 aa19.28■□□□□ 0.68
CLN8-209ENST00000635970 RARSP54136 660 aaKnown RBP19.28■□□□□ 0.68
CLN8-209ENST00000635970 TBC1D9BQ66K14 1250 aa19.28■□□□□ 0.68
CLN8-209ENST00000635970 BICDL1Q6ZP65 573 aa19.28■□□□□ 0.68
CLN8-209ENST00000635970 STK31Q9BXU1 1019 aa19.28■□□□□ 0.68
CLN8-209ENST00000635970 HYPKQ9NX55 129 aa19.28■□□□□ 0.68
CLN8-209ENST00000635970 COG6Q9Y2V7 657 aa19.28■□□□□ 0.68
CLN8-209ENST00000635970 RWDD1Q9H446 243 aaPredicted RBP19.28■□□□□ 0.68
CLN8-209ENST00000635970 SLC4A2P04920 1241 aa19.27■□□□□ 0.68
CLN8-209ENST00000635970 DDR1Q08345 913 aa19.27■□□□□ 0.68
CLN8-209ENST00000635970 NFIXQ14938 502 aa19.27■□□□□ 0.68
CLN8-209ENST00000635970 G2E3Q7L622 706 aa19.27■□□□□ 0.68
CLN8-209ENST00000635970 TBC1D32Q96NH3 1257 aa19.27■□□□□ 0.68
CLN8-209ENST00000635970 CT47B1P0C2W7 299 aaPredicted RBP19.26■□□□□ 0.67
CLN8-209ENST00000635970 NRXN2Q9P2S2 1712 aa19.26■□□□□ 0.67
CLN8-209ENST00000635970 GOLGB1Q14789 3259 aaKnown RBP19.26■□□□□ 0.67
CLN8-209ENST00000635970 PANK1Q8TE04 598 aa19.26■□□□□ 0.67
CLN8-209ENST00000635970 ANTXR1Q9H6X2 564 aa19.26■□□□□ 0.67
CLN8-209ENST00000635970 TM4SF1P30408 202 aa19.25■□□□□ 0.67
CLN8-209ENST00000635970 CHMP4AQ9BY43 222 aa19.25■□□□□ 0.67
CLN8-209ENST00000635970 ERVV-1B6SEH8 477 aa19.24■□□□□ 0.67
CLN8-209ENST00000635970 BCL2L13Q9BXK5 485 aa19.24■□□□□ 0.67
CLN8-209ENST00000635970 PPP1R1BQ9UD71 204 aaPredicted RBP19.24■□□□□ 0.67
CLN8-209ENST00000635970 ZNF652Q9Y2D9 606 aa19.24■□□□□ 0.67
CLN8-209ENST00000635970 POLRMTO00411 1230 aaKnown RBP19.24■□□□□ 0.67
CLN8-209ENST00000635970 SEC24BO95487 1268 aa19.23■□□□□ 0.67
CLN8-209ENST00000635970 CLEC4GQ6UXB4 293 aa19.23■□□□□ 0.67
CLN8-209ENST00000635970 KIF13BQ9NQT8 1826 aa19.23■□□□□ 0.67
CLN8-209ENST00000635970 GIGYF2Q6Y7W6 1299 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms