RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 LRPPRCP42704 1394 aaKnown RBP6.38□□□□□ -1.39
SCN1A-209ENST00000635750 RAB11FIP3O75154 756 aa6.38□□□□□ -1.39
SCN1A-209ENST00000635750 LMOD1P29536 600 aaPredicted RBP6.38□□□□□ -1.39
SCN1A-209ENST00000635750 TPD52P55327 224 aaPredicted RBP6.38□□□□□ -1.39
SCN1A-209ENST00000635750 C1orf115Q9H7X2 142 aa6.38□□□□□ -1.39
SCN1A-209ENST00000635750 PODXL2Q9NZ53 605 aa6.38□□□□□ -1.39
SCN1A-209ENST00000635750 ADAMTS2O95450 1211 aa6.38□□□□□ -1.39
SCN1A-209ENST00000635750 CASTP20810 708 aaKnown RBP6.38□□□□□ -1.39
SCN1A-209ENST00000635750 PLS1Q14651 629 aa6.38□□□□□ -1.39
SCN1A-209ENST00000635750 TTF1Q15361 905 aaPredicted RBP6.38□□□□□ -1.39
SCN1A-209ENST00000635750 TMEM132EQ6IEE7 984 aa6.38□□□□□ -1.39
SCN1A-209ENST00000635750 KAT14Q9H8E8 782 aa6.38□□□□□ -1.39
SCN1A-209ENST00000635750 KIAA0753Q2KHM9 967 aa6.38□□□□□ -1.39
SCN1A-209ENST00000635750 PRKRIP1Q9H875 184 aaPredicted RBP6.38□□□□□ -1.39
SCN1A-209ENST00000635750 TXNDC16Q9P2K2 825 aa6.38□□□□□ -1.39
SCN1A-209ENST00000635750 CLIP2Q9UDT6 1046 aa6.38□□□□□ -1.39
SCN1A-209ENST00000635750 CEP83Q9Y592 693 aa6.38□□□□□ -1.39
SCN1A-209ENST00000635750 RTEL1-TNFRSF6BF6WH68 1400 aa6.38□□□□□ -1.39
SCN1A-209ENST00000635750 TOP1P11387 765 aaKnown RBP6.38□□□□□ -1.39
SCN1A-209ENST00000635750 MXRA7P84157 204 aa6.38□□□□□ -1.39
SCN1A-209ENST00000635750 KIF4BQ2VIQ3 1234 aa6.38□□□□□ -1.39
SCN1A-209ENST00000635750 TRMT1LQ7Z2T5 733 aaKnown RBP6.38□□□□□ -1.39
SCN1A-209ENST00000635750 C8orf76Q96K31 380 aa6.38□□□□□ -1.39
SCN1A-209ENST00000635750 HAUS7Q99871 368 aa6.38□□□□□ -1.39
SCN1A-209ENST00000635750 ANO10Q9NW15 660 aa6.38□□□□□ -1.39
SCN1A-209ENST00000635750 NOL3O60936 208 aaKnown RBP6.37□□□□□ -1.39
SCN1A-209ENST00000635750 POLD1P28340 1107 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 RNF187Q5TA31 235 aaPredicted RBP6.37□□□□□ -1.39
SCN1A-209ENST00000635750 CCT6BQ92526 530 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 RIOK3O14730 519 aaKnown RBP6.37□□□□□ -1.39
SCN1A-209ENST00000635750 CKAP4Q07065 602 aaKnown RBP6.37□□□□□ -1.39
SCN1A-209ENST00000635750 ZGPATQ8N5A5 531 aaKnown RBP6.37□□□□□ -1.39
SCN1A-209ENST00000635750 VIMP08670 466 aaKnown RBP6.37□□□□□ -1.39
SCN1A-209ENST00000635750 SFPQP23246 707 aaKnown RBP eCLIP6.37□□□□□ -1.39
SCN1A-209ENST00000635750 PRPHP41219 470 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 SATB1Q01826 763 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 K7ELQ4 463 aaPredicted RBP6.37□□□□□ -1.39
SCN1A-209ENST00000635750 DNA2P51530 1060 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 CFAP58Q5T655 872 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 FILIP1Q7Z7B0 1213 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 CCDC144CPQ8IYA2 1237 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 NAP1L3Q99457 506 aaPredicted RBP6.37□□□□□ -1.39
SCN1A-209ENST00000635750 TRMT112Q9UI30 125 aaKnown RBP6.37□□□□□ -1.39
SCN1A-209ENST00000635750 RASAL2Q9UJF2 1139 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 KRT13P13646 458 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 MPRIPQ6WCQ1 1025 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 PPP1R42Q7Z4L9 355 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 POTEB2H3BUK9 544 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 ATP2A1O14983 1001 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 KANK3Q6NY19 840 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 PDCL2Q8N4E4 241 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 CCDC63Q8NA47 563 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 FBF1Q8TES7 1133 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 RAD54L2Q9Y4B4 1467 aa6.37□□□□□ -1.39
SCN1A-209ENST00000635750 IFIT3O14879 490 aaKnown RBP6.36□□□□□ -1.39
SCN1A-209ENST00000635750 ZBTB16Q05516 673 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 CNNM3Q8NE01 707 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 SELENOOQ9BVL4 669 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 EXOC5O00471 708 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 PTCD1O75127 700 aaKnown RBP6.36□□□□□ -1.39
SCN1A-209ENST00000635750 CNGA1P29973 690 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 MYO15BQ96JP2 1530 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 CCDC88BA6NC98 1476 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 CTAGE5O15320 804 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 CEP112Q8N8E3 955 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 CCDC89Q8N998 374 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 TSPY2A6NKD2 308 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 CUL4BQ13620 913 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 KIF1BPQ96EK5 621 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 VAT1LQ9HCJ6 419 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 CRCPO75575 148 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 AMOTQ4VCS5 1084 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 TEX13AQ9BXU3 409 aaPredicted RBP6.36□□□□□ -1.39
SCN1A-209ENST00000635750 MAK16Q9BXY0 300 aaKnown RBP6.36□□□□□ -1.39
SCN1A-209ENST00000635750 GOLIM4O00461 696 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 PTPN14Q15678 1187 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 GABPB2Q8TAK5 448 aaPredicted RBP6.36□□□□□ -1.39
SCN1A-209ENST00000635750 NSRP1Q9H0G5 558 aaKnown RBP6.36□□□□□ -1.39
SCN1A-209ENST00000635750 EXOC1Q9NV70 894 aa6.36□□□□□ -1.39
SCN1A-209ENST00000635750 ZC3H6P61129 1189 aaKnown RBP6.35□□□□□ -1.39
SCN1A-209ENST00000635750 XPCQ01831 940 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-209ENST00000635750 CCDC6Q16204 474 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 GSTA5Q7RTV2 222 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 TCP11L2Q8N4U5 519 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 KIF18AQ8NI77 898 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 STMN4Q9H169 189 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-209ENST00000635750 MMRN2Q9H8L6 949 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 EXOSC9Q06265 439 aaKnown RBP6.35□□□□□ -1.39
SCN1A-209ENST00000635750 CTR9Q6PD62 1173 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 BCAR3O75815 825 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 ATP2A2P16615 1042 aaKnown RBP6.35□□□□□ -1.39
SCN1A-209ENST00000635750 SLC8A3P57103 927 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 NBPF8Q3BBV2 869 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 BRDTQ58F21 947 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-209ENST00000635750 NBPF14Q5TI25 921 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 EHBP1Q8NDI1 1231 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 UBA7P41226 1012 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 RSPH3Q86UC2 560 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 SMC6Q96SB8 1091 aa6.35□□□□□ -1.39
SCN1A-209ENST00000635750 PAIP2Q9BPZ3 127 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms