RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	TREH	O43280	583 aa		10.67	□□□□□ -0.7
SMARCA2-238	ENST00000635273	P4HB	P07237	508 aa	Known RBP	10.67	□□□□□ -0.7
SMARCA2-238	ENST00000635273	VAMP1	P23763	118 aa		10.67	□□□□□ -0.7
SMARCA2-238	ENST00000635273	BRD2	P25440	801 aa	Known RBP	10.67	□□□□□ -0.7
SMARCA2-238	ENST00000635273	RELB	Q01201	579 aa		10.67	□□□□□ -0.7
SMARCA2-238	ENST00000635273	ALDH16A1	Q8IZ83	802 aa		10.67	□□□□□ -0.7
SMARCA2-238	ENST00000635273	ABTB2	Q8N961	1025 aa		10.67	□□□□□ -0.7
SMARCA2-238	ENST00000635273	TMC1	Q8TDI8	760 aa		10.67	□□□□□ -0.7
SMARCA2-238	ENST00000635273	PARP3	Q9Y6F1	533 aa		10.67	□□□□□ -0.7
SMARCA2-238	ENST00000635273	TIMP2	P16035	220 aa		10.66	□□□□□ -0.7
SMARCA2-238	ENST00000635273	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.66	□□□□□ -0.7
SMARCA2-238	ENST00000635273	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.66	□□□□□ -0.7
SMARCA2-238	ENST00000635273	FMR1	Q06787	632 aa	Known RBP eCLIP	10.65	□□□□□ -0.7
SMARCA2-238	ENST00000635273	RTN1	Q16799	776 aa		10.65	□□□□□ -0.7
SMARCA2-238	ENST00000635273	C11orf91	Q3C1V1	193 aa		10.65	□□□□□ -0.7
SMARCA2-238	ENST00000635273	ATCAY	Q86WG3	371 aa		10.65	□□□□□ -0.7
SMARCA2-238	ENST00000635273	IRF7	Q92985	503 aa		10.65	□□□□□ -0.7
SMARCA2-238	ENST00000635273	NIFK	Q9BYG3	293 aa	Known RBP	10.65	□□□□□ -0.7
SMARCA2-238	ENST00000635273	CCDC180	Q9P1Z9	1646 aa		10.65	□□□□□ -0.7
SMARCA2-238	ENST00000635273	DGKZ	Q13574	1117 aa		10.64	□□□□□ -0.71
SMARCA2-238	ENST00000635273	DSC3	Q14574	896 aa		10.64	□□□□□ -0.71
SMARCA2-238	ENST00000635273	PHACTR1	Q9C0D0	580 aa		10.64	□□□□□ -0.71
SMARCA2-238	ENST00000635273	IGHA2	P01877	340 aa		10.63	□□□□□ -0.71
SMARCA2-238	ENST00000635273	GMPR	P36959	345 aa		10.63	□□□□□ -0.71
SMARCA2-238	ENST00000635273	PLCB3	Q01970	1234 aa		10.63	□□□□□ -0.71
SMARCA2-238	ENST00000635273	TMEM214	Q6NUQ4	689 aa	Known RBP	10.63	□□□□□ -0.71
SMARCA2-238	ENST00000635273	ETFBKMT	Q8IXQ9	262 aa		10.63	□□□□□ -0.71
SMARCA2-238	ENST00000635273	DMRTB1	Q96MA1	342 aa		10.63	□□□□□ -0.71
SMARCA2-238	ENST00000635273	FAM129B	Q96TA1	746 aa		10.63	□□□□□ -0.71
SMARCA2-238	ENST00000635273	KLK14	Q9P0G3	267 aa		10.63	□□□□□ -0.71
SMARCA2-238	ENST00000635273	IGSF3	O75054	1194 aa		10.62	□□□□□ -0.71
SMARCA2-238	ENST00000635273	PDE3B	Q13370	1112 aa		10.62	□□□□□ -0.71
SMARCA2-238	ENST00000635273	RHBDD1	Q8TEB9	315 aa		10.62	□□□□□ -0.71
SMARCA2-238	ENST00000635273	IFT43	Q96FT9	208 aa		10.62	□□□□□ -0.71
SMARCA2-238	ENST00000635273	TCF3	P15923	654 aa		10.61	□□□□□ -0.71
SMARCA2-238	ENST00000635273	SMPD1	P17405	629 aa		10.61	□□□□□ -0.71
SMARCA2-238	ENST00000635273	GTF2E1	P29083	439 aa	Predicted RBP	10.61	□□□□□ -0.71
SMARCA2-238	ENST00000635273	EHHADH	Q08426	723 aa		10.61	□□□□□ -0.71
SMARCA2-238	ENST00000635273	C1orf53	Q5VUE5	145 aa		10.61	□□□□□ -0.71
SMARCA2-238	ENST00000635273	NPAS3	Q8IXF0	933 aa		10.61	□□□□□ -0.71
SMARCA2-238	ENST00000635273	GRIP2	Q9C0E4	1043 aa		10.61	□□□□□ -0.71
SMARCA2-238	ENST00000635273	NXF1	Q9UBU9	619 aa	Known RBP	10.61	□□□□□ -0.71
SMARCA2-238	ENST00000635273	POLI	Q9UNA4	740 aa		10.61	□□□□□ -0.71
SMARCA2-238	ENST00000635273	GPR182	O15218	404 aa		10.6	□□□□□ -0.71
SMARCA2-238	ENST00000635273	MEIOB	Q8N635	442 aa		10.6	□□□□□ -0.71
SMARCA2-238	ENST00000635273	LOR	P23490	312 aa	Predicted RBP	10.59	□□□□□ -0.71
SMARCA2-238	ENST00000635273	MZF1	P28698	734 aa	Predicted RBP	10.59	□□□□□ -0.71
SMARCA2-238	ENST00000635273	GPC1	P35052	558 aa		10.59	□□□□□ -0.71
SMARCA2-238	ENST00000635273	TXLNA	P40222	546 aa		10.59	□□□□□ -0.71
SMARCA2-238	ENST00000635273	BCL11A	Q9H165	835 aa		10.59	□□□□□ -0.71
SMARCA2-238	ENST00000635273	RECK	O95980	971 aa		10.58	□□□□□ -0.72
SMARCA2-238	ENST00000635273	ZAP70	P43403	619 aa		10.58	□□□□□ -0.72
SMARCA2-238	ENST00000635273	MAPK8	P45983	427 aa		10.58	□□□□□ -0.72
SMARCA2-238	ENST00000635273	RNF144A	P50876	292 aa	Predicted RBP	10.58	□□□□□ -0.72
SMARCA2-238	ENST00000635273	DNM1	Q05193	864 aa	Known RBP	10.58	□□□□□ -0.72
SMARCA2-238	ENST00000635273	GNAS	Q5JWF2	1037 aa		10.58	□□□□□ -0.72
SMARCA2-238	ENST00000635273	SLC27A3	Q5K4L6	730 aa		10.58	□□□□□ -0.72
SMARCA2-238	ENST00000635273	GJD3	Q8N144	294 aa		10.58	□□□□□ -0.72
SMARCA2-238	ENST00000635273	EDEM1	Q92611	657 aa		10.58	□□□□□ -0.72
SMARCA2-238	ENST00000635273	ALKBH8	Q96BT7	664 aa	Known RBP	10.58	□□□□□ -0.72
SMARCA2-238	ENST00000635273	PDGFA	P04085	211 aa		10.57	□□□□□ -0.72
SMARCA2-238	ENST00000635273	LDHB	P07195	334 aa	Known RBP	10.57	□□□□□ -0.72
SMARCA2-238	ENST00000635273	USP5	P45974	858 aa		10.57	□□□□□ -0.72
SMARCA2-238	ENST00000635273	TSEN34	Q9BSV6	310 aa	Known RBP	10.57	□□□□□ -0.72
SMARCA2-238	ENST00000635273	PLA2G4A	P47712	749 aa		10.56	□□□□□ -0.72
SMARCA2-238	ENST00000635273	MRPL58	Q14197	206 aa	Known RBP	10.56	□□□□□ -0.72
SMARCA2-238	ENST00000635273	C4orf17	Q53FE4	359 aa		10.56	□□□□□ -0.72
SMARCA2-238	ENST00000635273	TREML1	Q86YW5	311 aa		10.56	□□□□□ -0.72
SMARCA2-238	ENST00000635273	C7orf43	Q8WVR3	580 aa		10.56	□□□□□ -0.72
SMARCA2-238	ENST00000635273	HPS1	Q92902	700 aa		10.56	□□□□□ -0.72
SMARCA2-238	ENST00000635273	INSM2	Q96T92	566 aa	Predicted RBP	10.56	□□□□□ -0.72
SMARCA2-238	ENST00000635273	NIF3L1	Q9GZT8	377 aa		10.56	□□□□□ -0.72
SMARCA2-238	ENST00000635273	BCS1L	Q9Y276	419 aa		10.56	□□□□□ -0.72
SMARCA2-238	ENST00000635273	PRPF40A	O75400	957 aa	Known RBP	10.55	□□□□□ -0.72
SMARCA2-238	ENST00000635273	FGD1	P98174	961 aa		10.55	□□□□□ -0.72
SMARCA2-238	ENST00000635273	TSNAXIP1	Q2TAA8	658 aa		10.55	□□□□□ -0.72
SMARCA2-238	ENST00000635273	SPINT1	O43278	529 aa		10.54	□□□□□ -0.72
SMARCA2-238	ENST00000635273	GPR152	Q8TDT2	470 aa		10.54	□□□□□ -0.72
SMARCA2-238	ENST00000635273	DUSP9	Q99956	384 aa	Known RBP	10.54	□□□□□ -0.72
SMARCA2-238	ENST00000635273	WWC3	Q9ULE0	1092 aa		10.54	□□□□□ -0.72
SMARCA2-238	ENST00000635273	XPC	Q01831	940 aa	Predicted RBP	10.53	□□□□□ -0.72
SMARCA2-238	ENST00000635273	AIDA	Q96BJ3	306 aa		10.53	□□□□□ -0.72
SMARCA2-238	ENST00000635273	BACH2	Q9BYV9	841 aa		10.53	□□□□□ -0.72
SMARCA2-238	ENST00000635273	PARP2	Q9UGN5	583 aa		10.53	□□□□□ -0.72
SMARCA2-238	ENST00000635273	SPATA31C2	B4DYI2	1134 aa		10.52	□□□□□ -0.73
SMARCA2-238	ENST00000635273	PCSK2	P16519	638 aa		10.52	□□□□□ -0.73
SMARCA2-238	ENST00000635273	KCNMA1	Q12791	1236 aa		10.52	□□□□□ -0.73
SMARCA2-238	ENST00000635273	ENOX2	Q16206	610 aa	Known RBP	10.52	□□□□□ -0.73
SMARCA2-238	ENST00000635273	NBPF1	Q3BBV0	1214 aa		10.52	□□□□□ -0.73
SMARCA2-238	ENST00000635273	RHPN1	Q8TCX5	695 aa		10.52	□□□□□ -0.73
SMARCA2-238	ENST00000635273	POLM	Q9NP87	494 aa	Predicted RBP	10.52	□□□□□ -0.73
SMARCA2-238	ENST00000635273	ZDHHC3	Q9NYG2	299 aa		10.52	□□□□□ -0.73
SMARCA2-238	ENST00000635273	MICAL2	O94851	1124 aa		10.51	□□□□□ -0.73
SMARCA2-238	ENST00000635273	CTSO	P43234	321 aa	Predicted RBP	10.51	□□□□□ -0.73
SMARCA2-238	ENST00000635273	PHKA2	P46019	1235 aa		10.51	□□□□□ -0.73
SMARCA2-238	ENST00000635273	ATP2B2	Q01814	1243 aa		10.51	□□□□□ -0.73
SMARCA2-238	ENST00000635273	HIF1A	Q16665	826 aa		10.51	□□□□□ -0.73
SMARCA2-238	ENST00000635273	LINC00528	Q8N1L1	170 aa		10.51	□□□□□ -0.73
SMARCA2-238	ENST00000635273	NUDT16	Q96DE0	195 aa	Known RBP	10.51	□□□□□ -0.73
SMARCA2-238	ENST00000635273	FAM161B	Q96MY7	647 aa		10.51	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms