RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.38■□□□□ 0.53
LINC00339-208ENST00000634934 DDX58O95786 925 aaKnown RBP18.37■□□□□ 0.53
LINC00339-208ENST00000634934 PTPRCP08575 1304 aa18.37■□□□□ 0.53
LINC00339-208ENST00000634934 COL15A1P39059 1388 aa18.37■□□□□ 0.53
LINC00339-208ENST00000634934 A0A087WZG4 1122 aa18.36■□□□□ 0.53
LINC00339-208ENST00000634934 RRP1P56182 461 aaKnown RBP18.36■□□□□ 0.53
LINC00339-208ENST00000634934 TRAPPC3LQ5T215 181 aa18.36■□□□□ 0.53
LINC00339-208ENST00000634934 KIF6Q6ZMV9 814 aa18.36■□□□□ 0.53
LINC00339-208ENST00000634934 DZIP3Q86Y13 1208 aaKnown RBP18.36■□□□□ 0.53
LINC00339-208ENST00000634934 TBC1D2BQ9UPU7 963 aa18.36■□□□□ 0.53
LINC00339-208ENST00000634934 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.35■□□□□ 0.53
LINC00339-208ENST00000634934 MSH5O43196 834 aa18.35■□□□□ 0.53
LINC00339-208ENST00000634934 ATF7IPQ6VMQ6 1270 aa18.35■□□□□ 0.53
LINC00339-208ENST00000634934 ANKRD13DQ6ZTN6 518 aa18.35■□□□□ 0.53
LINC00339-208ENST00000634934 ARHGAP45Q92619 1136 aa18.35■□□□□ 0.53
LINC00339-208ENST00000634934 API5Q9BZZ5 524 aaKnown RBP18.35■□□□□ 0.53
LINC00339-208ENST00000634934 ZBTB3Q9H5J0 574 aa18.35■□□□□ 0.53
LINC00339-208ENST00000634934 PPP4R2Q9NY27 417 aa18.35■□□□□ 0.53
LINC00339-208ENST00000634934 RNF123Q5XPI4 1314 aa18.35■□□□□ 0.53
LINC00339-208ENST00000634934 C4AP0C0L4 1744 aa18.35■□□□□ 0.53
LINC00339-208ENST00000634934 PI4KAP2A4QPH2 592 aa18.34■□□□□ 0.53
LINC00339-208ENST00000634934 RIC3Q7Z5B4 369 aa18.34■□□□□ 0.53
LINC00339-208ENST00000634934 PI4KAP1Q8N8J0 262 aa18.34■□□□□ 0.53
LINC00339-208ENST00000634934 ARHGEF1Q92888 912 aaKnown RBP18.34■□□□□ 0.53
LINC00339-208ENST00000634934 F6X3S4 739 aa18.33■□□□□ 0.53
LINC00339-208ENST00000634934 CACNA1FO60840 1977 aa18.33■□□□□ 0.53
LINC00339-208ENST00000634934 LRP5O75197 1615 aa18.33■□□□□ 0.53
LINC00339-208ENST00000634934 TRIM27P14373 513 aa18.33■□□□□ 0.53
LINC00339-208ENST00000634934 ADRA2BP18089 450 aa18.33■□□□□ 0.53
LINC00339-208ENST00000634934 SSFA2P28290 1259 aa18.33■□□□□ 0.53
LINC00339-208ENST00000634934 KSR2Q6VAB6 950 aa18.33■□□□□ 0.53
LINC00339-208ENST00000634934 CLUAP1Q96AJ1 413 aa18.33■□□□□ 0.53
LINC00339-208ENST00000634934 TNNQ9UQP3 1299 aa18.33■□□□□ 0.53
LINC00339-208ENST00000634934 ATF5Q9Y2D1 282 aaPredicted RBP18.33■□□□□ 0.53
LINC00339-208ENST00000634934 RFC4P35249 363 aa18.33■□□□□ 0.52
LINC00339-208ENST00000634934 SLC4A10Q6U841 1118 aa18.33■□□□□ 0.52
LINC00339-208ENST00000634934 FTSJ3Q8IY81 847 aaKnown RBP18.33■□□□□ 0.52
LINC00339-208ENST00000634934 PLBD2Q8NHP8 589 aa18.33■□□□□ 0.52
LINC00339-208ENST00000634934 MAP3K2Q9Y2U5 619 aa18.33■□□□□ 0.52
LINC00339-208ENST00000634934 MAP3K15Q6ZN16 1313 aa18.32■□□□□ 0.52
LINC00339-208ENST00000634934 ZPR1O75312 459 aa18.32■□□□□ 0.52
LINC00339-208ENST00000634934 ADCY9O60503 1353 aa18.31■□□□□ 0.52
LINC00339-208ENST00000634934 DZIP1LQ8IYY4 767 aaKnown RBP18.31■□□□□ 0.52
LINC00339-208ENST00000634934 DNAAF4Q8WXU2 420 aa18.31■□□□□ 0.52
LINC00339-208ENST00000634934 SRP68Q9UHB9 627 aaKnown RBP18.31■□□□□ 0.52
LINC00339-208ENST00000634934 CAMTA2O94983 1202 aa18.3■□□□□ 0.52
LINC00339-208ENST00000634934 MSL1Q68DK7 614 aa18.3■□□□□ 0.52
LINC00339-208ENST00000634934 FLAD1Q8NFF5 587 aa18.3■□□□□ 0.52
LINC00339-208ENST00000634934 MTFR1LQ9H019 292 aa18.3■□□□□ 0.52
LINC00339-208ENST00000634934 NARFQ9UHQ1 456 aa18.3■□□□□ 0.52
LINC00339-208ENST00000634934 ERVV-1B6SEH8 477 aa18.29■□□□□ 0.52
LINC00339-208ENST00000634934 MS4A1P11836 297 aa18.29■□□□□ 0.52
LINC00339-208ENST00000634934 HLFQ16534 295 aa18.29■□□□□ 0.52
LINC00339-208ENST00000634934 C20orf194Q5TEA3 1177 aa18.29■□□□□ 0.52
LINC00339-208ENST00000634934 USPL1Q5W0Q7 1092 aa18.29■□□□□ 0.52
LINC00339-208ENST00000634934 PANK1Q8TE04 598 aa18.29■□□□□ 0.52
LINC00339-208ENST00000634934 SPON1Q9HCB6 807 aa18.29■□□□□ 0.52
LINC00339-208ENST00000634934 RBM19Q9Y4C8 960 aaKnown RBP18.29■□□□□ 0.52
LINC00339-208ENST00000634934 COL24A1Q17RW2 1714 aa18.29■□□□□ 0.52
LINC00339-208ENST00000634934 MYD88Q99836 296 aa18.28■□□□□ 0.52
LINC00339-208ENST00000634934 ANP32EQ9BTT0 268 aa18.28■□□□□ 0.52
LINC00339-208ENST00000634934 METTL22Q9BUU2 404 aaPredicted RBP18.28■□□□□ 0.52
LINC00339-208ENST00000634934 USP42Q9H9J4 1324 aaKnown RBP18.28■□□□□ 0.52
LINC00339-208ENST00000634934 RLBP1P12271 317 aa18.28■□□□□ 0.52
LINC00339-208ENST00000634934 PTGER2P43116 358 aa18.28■□□□□ 0.52
LINC00339-208ENST00000634934 NEXNQ0ZGT2 675 aa18.28■□□□□ 0.52
LINC00339-208ENST00000634934 GIGYF2Q6Y7W6 1299 aaKnown RBP18.28■□□□□ 0.52
LINC00339-208ENST00000634934 ZNF652Q9Y2D9 606 aa18.28■□□□□ 0.52
LINC00339-208ENST00000634934 ABCC4O15439 1325 aa18.27■□□□□ 0.52
LINC00339-208ENST00000634934 PDE3AQ14432 1141 aa18.27■□□□□ 0.51
LINC00339-208ENST00000634934 ATP5J2-PTCD1G3V325 749 aa18.26■□□□□ 0.51
LINC00339-208ENST00000634934 IRX6P78412 446 aaPredicted RBP18.26■□□□□ 0.51
LINC00339-208ENST00000634934 TCIRG1Q13488 830 aa18.26■□□□□ 0.51
LINC00339-208ENST00000634934 TMEM57Q8N5G2 664 aa18.26■□□□□ 0.51
LINC00339-208ENST00000634934 SLC16A10Q8TF71 515 aa18.26■□□□□ 0.51
LINC00339-208ENST00000634934 SGIP1Q9BQI5 828 aa18.26■□□□□ 0.51
LINC00339-208ENST00000634934 CCT4P50991 539 aaKnown RBP18.25■□□□□ 0.51
LINC00339-208ENST00000634934 HSP90AB3PQ58FF7 597 aa18.25■□□□□ 0.51
LINC00339-208ENST00000634934 BEND3Q5T5X7 828 aa18.25■□□□□ 0.51
LINC00339-208ENST00000634934 ITPRIPQ8IWB1 547 aa18.25■□□□□ 0.51
LINC00339-208ENST00000634934 SRCIN1Q9C0H9 1055 aa18.25■□□□□ 0.51
LINC00339-208ENST00000634934 BCL2L12Q9HB09 334 aa18.25■□□□□ 0.51
LINC00339-208ENST00000634934 GPTP24298 496 aa18.24■□□□□ 0.51
LINC00339-208ENST00000634934 CLEC4GQ6UXB4 293 aa18.24■□□□□ 0.51
LINC00339-208ENST00000634934 LINS1Q8NG48 757 aa18.24■□□□□ 0.51
LINC00339-208ENST00000634934 COG6Q9Y2V7 657 aa18.24■□□□□ 0.51
LINC00339-208ENST00000634934 GYS1P13807 737 aa18.23■□□□□ 0.51
LINC00339-208ENST00000634934 CWF19L2Q2TBE0 894 aaKnown RBP18.23■□□□□ 0.51
LINC00339-208ENST00000634934 INTS3Q68E01 1043 aaKnown RBP18.23■□□□□ 0.51
LINC00339-208ENST00000634934 BICDL1Q6ZP65 573 aa18.23■□□□□ 0.51
LINC00339-208ENST00000634934 ARFGEF2Q9Y6D5 1785 aa18.23■□□□□ 0.51
LINC00339-208ENST00000634934 IGKV5-2P06315 115 aa18.23■□□□□ 0.51
LINC00339-208ENST00000634934 NIP7Q9Y221 180 aaKnown RBP eCLIP18.23■□□□□ 0.51
LINC00339-208ENST00000634934 ATP10DQ9P241 1426 aa18.22■□□□□ 0.51
LINC00339-208ENST00000634934 PXDNLA1KZ92 1463 aa18.22■□□□□ 0.51
LINC00339-208ENST00000634934 RGL2O15211 777 aa18.22■□□□□ 0.51
LINC00339-208ENST00000634934 TBC1D9BQ66K14 1250 aa18.22■□□□□ 0.51
LINC00339-208ENST00000634934 ISCA1Q9BUE6 129 aa18.22■□□□□ 0.51
LINC00339-208ENST00000634934 NEURL1BA8MQ27 555 aa18.21■□□□□ 0.51
LINC00339-208ENST00000634934 ALDH1L1O75891 902 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms