RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 TMEM214Q6NUQ4 689 aaKnown RBP7.97□□□□□ -1.13
TRAPPC9-216ENST00000634178 PPARGC1BQ86YN6 1023 aaKnown RBP7.97□□□□□ -1.13
TRAPPC9-216ENST00000634178 ALDH16A1Q8IZ83 802 aa7.97□□□□□ -1.13
TRAPPC9-216ENST00000634178 NGLY1Q96IV0 654 aa7.97□□□□□ -1.13
TRAPPC9-216ENST00000634178 FAM13BQ9NYF5 915 aa7.97□□□□□ -1.13
TRAPPC9-216ENST00000634178 TERTO14746 1132 aaKnown RBP7.96□□□□□ -1.14
TRAPPC9-216ENST00000634178 FZD6O60353 706 aa7.96□□□□□ -1.14
TRAPPC9-216ENST00000634178 ZIC2O95409 532 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC9-216ENST00000634178 RPLP1P05386 114 aaKnown RBP7.96□□□□□ -1.14
TRAPPC9-216ENST00000634178 P4HBP07237 508 aaKnown RBP7.96□□□□□ -1.14
TRAPPC9-216ENST00000634178 FMR1Q06787 632 aaKnown RBP eCLIP7.96□□□□□ -1.14
TRAPPC9-216ENST00000634178 L3MBTL2Q969R5 705 aa7.96□□□□□ -1.14
TRAPPC9-216ENST00000634178 ALKBH8Q96BT7 664 aaKnown RBP7.96□□□□□ -1.14
TRAPPC9-216ENST00000634178 TRIM47Q96LD4 638 aa7.96□□□□□ -1.14
TRAPPC9-216ENST00000634178 FHDC1Q9C0D6 1143 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC9-216ENST00000634178 TTC24A2A3L6 582 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC9-216ENST00000634178 NEFLP07196 543 aa7.95□□□□□ -1.14
TRAPPC9-216ENST00000634178 MZF1P28698 734 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC9-216ENST00000634178 GPC1P35052 558 aa7.95□□□□□ -1.14
TRAPPC9-216ENST00000634178 XPCQ01831 940 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC9-216ENST00000634178 CBLBQ13191 982 aa7.95□□□□□ -1.14
TRAPPC9-216ENST00000634178 GNASQ5JWF2 1037 aa7.95□□□□□ -1.14
TRAPPC9-216ENST00000634178 TTC16Q8NEE8 873 aa7.95□□□□□ -1.14
TRAPPC9-216ENST00000634178 RHBDD1Q8TEB9 315 aa7.95□□□□□ -1.14
TRAPPC9-216ENST00000634178 FAM129BQ96TA1 746 aa7.95□□□□□ -1.14
TRAPPC9-216ENST00000634178 SCRIBQ14160 1630 aa7.95□□□□□ -1.14
TRAPPC9-216ENST00000634178 J3QL48 77 aa7.94□□□□□ -1.14
TRAPPC9-216ENST00000634178 PRPF40AO75400 957 aaKnown RBP7.94□□□□□ -1.14
TRAPPC9-216ENST00000634178 LDHBP07195 334 aaKnown RBP7.94□□□□□ -1.14
TRAPPC9-216ENST00000634178 WDR4P57081 412 aaKnown RBP7.94□□□□□ -1.14
TRAPPC9-216ENST00000634178 EHHADHQ08426 723 aa7.94□□□□□ -1.14
TRAPPC9-216ENST00000634178 DSC3Q14574 896 aa7.94□□□□□ -1.14
TRAPPC9-216ENST00000634178 ITPKCQ96DU7 683 aa7.94□□□□□ -1.14
TRAPPC9-216ENST00000634178 IFT43Q96FT9 208 aa7.94□□□□□ -1.14
TRAPPC9-216ENST00000634178 CCDC87Q9NVE4 849 aa7.94□□□□□ -1.14
TRAPPC9-216ENST00000634178 LRFN2Q9ULH4 789 aa7.94□□□□□ -1.14
TRAPPC9-216ENST00000634178 HCN4Q9Y3Q4 1203 aa7.94□□□□□ -1.14
TRAPPC9-216ENST00000634178 ZCCHC6Q5VYS8 1495 aaKnown RBP7.94□□□□□ -1.14
TRAPPC9-216ENST00000634178 MAPK8P45983 427 aa7.93□□□□□ -1.14
TRAPPC9-216ENST00000634178 RELBQ01201 579 aa7.93□□□□□ -1.14
TRAPPC9-216ENST00000634178 DGKZQ13574 1117 aa7.93□□□□□ -1.14
TRAPPC9-216ENST00000634178 KDF1Q8NAX2 398 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC9-216ENST00000634178 PHACTR1Q9C0D0 580 aa7.93□□□□□ -1.14
TRAPPC9-216ENST00000634178 MRS2Q9HD23 443 aa7.93□□□□□ -1.14
TRAPPC9-216ENST00000634178 USP3Q9Y6I4 520 aa7.93□□□□□ -1.14
TRAPPC9-216ENST00000634178 LORP23490 312 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC9-216ENST00000634178 ZAP70P43403 619 aa7.92□□□□□ -1.14
TRAPPC9-216ENST00000634178 NBPF1Q3BBV0 1214 aa7.92□□□□□ -1.14
TRAPPC9-216ENST00000634178 SLC27A3Q5K4L6 730 aa7.92□□□□□ -1.14
TRAPPC9-216ENST00000634178 ALG1LQ6GMV1 187 aa7.92□□□□□ -1.14
TRAPPC9-216ENST00000634178 ZDHHC1Q8WTX9 485 aa7.92□□□□□ -1.14
TRAPPC9-216ENST00000634178 KLF16Q9BXK1 252 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC9-216ENST00000634178 GPC6Q9Y625 555 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC9-216ENST00000634178 UPP2O95045 317 aa7.91□□□□□ -1.14
TRAPPC9-216ENST00000634178 TAGLNQ01995 201 aaKnown RBP7.91□□□□□ -1.14
TRAPPC9-216ENST00000634178 DNM1Q05193 864 aaKnown RBP7.91□□□□□ -1.14
TRAPPC9-216ENST00000634178 TSNAXIP1Q2TAA8 658 aa7.91□□□□□ -1.14
TRAPPC9-216ENST00000634178 GJD3Q8N144 294 aa7.91□□□□□ -1.14
TRAPPC9-216ENST00000634178 HPS1Q92902 700 aa7.91□□□□□ -1.14
TRAPPC9-216ENST00000634178 AGBL1Q96MI9 1066 aa7.91□□□□□ -1.14
TRAPPC9-216ENST00000634178 TSEN34Q9BSV6 310 aaKnown RBP7.91□□□□□ -1.14
TRAPPC9-216ENST00000634178 USP35Q9P2H5 1018 aa7.91□□□□□ -1.14
TRAPPC9-216ENST00000634178 POLIQ9UNA4 740 aa7.91□□□□□ -1.14
TRAPPC9-216ENST00000634178 ERCC6Q03468 1493 aa7.9□□□□□ -1.14
TRAPPC9-216ENST00000634178 TIMP2P16035 220 aa7.9□□□□□ -1.14
TRAPPC9-216ENST00000634178 RNF144AP50876 292 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC9-216ENST00000634178 ZNF295-AS1Q8N0V1 137 aa7.9□□□□□ -1.14
TRAPPC9-216ENST00000634178 EDEM1Q92611 657 aa7.9□□□□□ -1.14
TRAPPC9-216ENST00000634178 C8orf37Q96NL8 207 aa7.9□□□□□ -1.14
TRAPPC9-216ENST00000634178 ZNF395Q9H8N7 513 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC9-216ENST00000634178 ZFAND3Q9H8U3 227 aa7.9□□□□□ -1.14
TRAPPC9-216ENST00000634178 ZDHHC3Q9NYG2 299 aa7.9□□□□□ -1.14
TRAPPC9-216ENST00000634178 ANKIB1Q9P2G1 1089 aa7.9□□□□□ -1.14
TRAPPC9-216ENST00000634178 LOC100996750A0A140TA64 210 aa7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 SCAMP3O14828 347 aaKnown RBP7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 ZBTB39O15060 712 aa7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 IGSF3O75054 1194 aa7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 RECKO95980 971 aa7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 PDGFAP04085 211 aa7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 TATP17735 454 aaPredicted RBP7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 MRPL58Q14197 206 aaKnown RBP7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 SH3PXD2AQ5TCZ1 1133 aa7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 MEIOBQ8N635 442 aa7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 RHPN1Q8TCX5 695 aa7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 FBF1Q8TES7 1133 aa7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 FRMD6Q96NE9 622 aa7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 KRTAP4-6Q9BYQ5 205 aa7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 GRIP2Q9C0E4 1043 aa7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 NIF3L1Q9GZT8 377 aa7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 SENP2Q9HC62 589 aa7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 KLK14Q9P0G3 267 aa7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 PARP3Q9Y6F1 533 aa7.89□□□□□ -1.15
TRAPPC9-216ENST00000634178 GPR182O15218 404 aa7.88□□□□□ -1.15
TRAPPC9-216ENST00000634178 SORBS3O60504 671 aa7.88□□□□□ -1.15
TRAPPC9-216ENST00000634178 PSMD2Q13200 908 aa7.88□□□□□ -1.15
TRAPPC9-216ENST00000634178 ENOX2Q16206 610 aaKnown RBP7.88□□□□□ -1.15
TRAPPC9-216ENST00000634178 TMC4Q7Z404 712 aa7.88□□□□□ -1.15
TRAPPC9-216ENST00000634178 ATCAYQ86WG3 371 aa7.88□□□□□ -1.15
TRAPPC9-216ENST00000634178 TREML1Q86YW5 311 aa7.88□□□□□ -1.15
TRAPPC9-216ENST00000634178 ETFBKMTQ8IXQ9 262 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms