RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 USP16Q9Y5T5 823 aa24.15■■□□□ 1.46
PNKP-224ENST00000631020 LAMB4A4D0S4 1761 aa24.14■■□□□ 1.46
PNKP-224ENST00000631020 GIGYF1O75420 1035 aaPredicted RBP24.14■■□□□ 1.45
PNKP-224ENST00000631020 C8orf58Q8NAV2 365 aa24.14■■□□□ 1.45
PNKP-224ENST00000631020 WWC3Q9ULE0 1092 aa24.14■■□□□ 1.45
PNKP-224ENST00000631020 BCORQ6W2J9 1755 aa24.14■■□□□ 1.45
PNKP-224ENST00000631020 PIM2Q9P1W9 311 aa24.13■■□□□ 1.45
PNKP-224ENST00000631020 BCS1LQ9Y276 419 aa24.13■■□□□ 1.45
PNKP-224ENST00000631020 SERPINB2P05120 415 aa24.12■■□□□ 1.45
PNKP-224ENST00000631020 DLEC1Q9Y238 1755 aa24.11■■□□□ 1.45
PNKP-224ENST00000631020 DUSP27Q5VZP5 1158 aa24.11■■□□□ 1.45
PNKP-224ENST00000631020 ELL2O00472 640 aaPredicted RBP24.1■■□□□ 1.45
PNKP-224ENST00000631020 RGL2O15211 777 aa24.1■■□□□ 1.45
PNKP-224ENST00000631020 TSPYL6Q8N831 410 aa24.1■■□□□ 1.45
PNKP-224ENST00000631020 EXOSC9Q06265 439 aaKnown RBP24.1■■□□□ 1.45
PNKP-224ENST00000631020 TBC1D2BQ9UPU7 963 aa24.1■■□□□ 1.45
PNKP-224ENST00000631020 ZNF330Q9Y3S2 320 aaPredicted RBP24.1■■□□□ 1.45
PNKP-224ENST00000631020 ATP10DQ9P241 1426 aa24.1■■□□□ 1.45
PNKP-224ENST00000631020 CAMTA2O94983 1202 aa24.09■■□□□ 1.45
PNKP-224ENST00000631020 DALRD3Q5D0E6 543 aaKnown RBP24.09■■□□□ 1.45
PNKP-224ENST00000631020 CARMIL3Q8ND23 1372 aa24.08■■□□□ 1.45
PNKP-224ENST00000631020 DZIP3Q86Y13 1208 aaKnown RBP24.08■■□□□ 1.45
PNKP-224ENST00000631020 TBC1D9BQ66K14 1250 aa24.07■■□□□ 1.44
PNKP-224ENST00000631020 CLEC4GQ6UXB4 293 aa24.07■■□□□ 1.44
PNKP-224ENST00000631020 PDZRN3Q9UPQ7 1066 aa24.06■■□□□ 1.44
PNKP-224ENST00000631020 CHRNA5P30532 468 aa24.05■■□□□ 1.44
PNKP-224ENST00000631020 NBPF26B4DH59 902 aa24.05■■□□□ 1.44
PNKP-224ENST00000631020 NBPF10Q6P3W6 841 aaKnown RBP24.05■■□□□ 1.44
PNKP-224ENST00000631020 BICDL1Q6ZP65 573 aa24.05■■□□□ 1.44
PNKP-224ENST00000631020 NBPF15Q8N660 670 aa24.05■■□□□ 1.44
PNKP-224ENST00000631020 SETDB2Q96T68 719 aa24.05■■□□□ 1.44
PNKP-224ENST00000631020 ANKRD31Q8N7Z5 1873 aa24.04■■□□□ 1.44
PNKP-224ENST00000631020 VAMP4O75379 141 aa24.04■■□□□ 1.44
PNKP-224ENST00000631020 HOXB7P09629 217 aa24.04■■□□□ 1.44
PNKP-224ENST00000631020 EIF2S2P20042 333 aaKnown RBP24.04■■□□□ 1.44
PNKP-224ENST00000631020 TWISTNBQ3B726 338 aaPredicted RBP24.04■■□□□ 1.44
PNKP-224ENST00000631020 ARHGAP27Q6ZUM4 889 aa24.04■■□□□ 1.44
PNKP-224ENST00000631020 ZNF652Q9Y2D9 606 aa24.04■■□□□ 1.44
PNKP-224ENST00000631020 NECTIN2Q92692 538 aa24.02■■□□□ 1.44
PNKP-224ENST00000631020 BRIP1Q9BX63 1249 aa24.02■■□□□ 1.44
PNKP-224ENST00000631020 PIP4K2AP48426 406 aaPredicted RBP24.01■■□□□ 1.43
PNKP-224ENST00000631020 C1QTNF8P60827 252 aa24.01■■□□□ 1.43
PNKP-224ENST00000631020 PRR5LQ6MZQ0 368 aa24.01■■□□□ 1.43
PNKP-224ENST00000631020 H0YIN7 160 aa24■■□□□ 1.43
PNKP-224ENST00000631020 PDE6BP35913 854 aa24■■□□□ 1.43
PNKP-224ENST00000631020 GPBP1L1Q9HC44 474 aaPredicted RBP24■■□□□ 1.43
PNKP-224ENST00000631020 HDGFL1Q5TGJ6 251 aa24■■□□□ 1.43
PNKP-224ENST00000631020 PDIA6Q15084 440 aa23.99■■□□□ 1.43
PNKP-224ENST00000631020 C2CD5Q86YS7 1000 aa23.99■■□□□ 1.43
PNKP-224ENST00000631020 CNBD1Q8NA66 436 aa23.99■■□□□ 1.43
PNKP-224ENST00000631020 ERBB4Q15303 1308 aa23.98■■□□□ 1.43
PNKP-224ENST00000631020 TTLL6Q8N841 843 aa23.98■■□□□ 1.43
PNKP-224ENST00000631020 SBF1O95248 1867 aa23.97■■□□□ 1.43
PNKP-224ENST00000631020 COL11A2P13942 1736 aaPredicted RBP23.96■■□□□ 1.43
PNKP-224ENST00000631020 TCERG1O14776 1098 aaKnown RBP23.96■■□□□ 1.43
PNKP-224ENST00000631020 ST5P78524 1137 aa23.96■■□□□ 1.43
PNKP-224ENST00000631020 PROSER3Q2NL68 480 aa23.96■■□□□ 1.43
PNKP-224ENST00000631020 ANXA1P04083 346 aa23.95■■□□□ 1.43
PNKP-224ENST00000631020 ERVV-1B6SEH8 477 aa23.94■■□□□ 1.42
PNKP-224ENST00000631020 LRP10Q7Z4F1 713 aa23.94■■□□□ 1.42
PNKP-224ENST00000631020 CHPF2Q9P2E5 772 aa23.94■■□□□ 1.42
PNKP-224ENST00000631020 NUP98P52948 1817 aa23.94■■□□□ 1.42
PNKP-224ENST00000631020 MYL6BP14649 208 aa23.94■■□□□ 1.42
PNKP-224ENST00000631020 CCDC30Q5VVM6 783 aa23.94■■□□□ 1.42
PNKP-224ENST00000631020 NPHP1O15259 732 aa23.93■■□□□ 1.42
PNKP-224ENST00000631020 NBPF5PQ86XG9 351 aaPredicted RBP23.93■■□□□ 1.42
PNKP-224ENST00000631020 DDX21Q9NR30 783 aaKnown RBP eCLIP23.93■■□□□ 1.42
PNKP-224ENST00000631020 DBF4Q9UBU7 674 aaPredicted RBP23.93■■□□□ 1.42
PNKP-224ENST00000631020 ARFGEF2Q9Y6D5 1785 aa23.93■■□□□ 1.42
PNKP-224ENST00000631020 C9orf131Q5VYM1 1079 aa23.92■■□□□ 1.42
PNKP-224ENST00000631020 TPTE2Q6XPS3 522 aa23.92■■□□□ 1.42
PNKP-224ENST00000631020 NIP7Q9Y221 180 aaKnown RBP eCLIP23.92■■□□□ 1.42
PNKP-224ENST00000631020 CT47B1P0C2W7 299 aaPredicted RBP23.91■■□□□ 1.42
PNKP-224ENST00000631020 MAP3K15Q6ZN16 1313 aa23.91■■□□□ 1.42
PNKP-224ENST00000631020 STYK1Q6J9G0 422 aa23.9■■□□□ 1.42
PNKP-224ENST00000631020 KIF6Q6ZMV9 814 aa23.9■■□□□ 1.42
PNKP-224ENST00000631020 ZNF526Q8TF50 670 aaPredicted RBP23.9■■□□□ 1.42
PNKP-224ENST00000631020 CHMP4AQ9BY43 222 aa23.9■■□□□ 1.42
PNKP-224ENST00000631020 ZC3H4Q9UPT8 1303 aaKnown RBP23.9■■□□□ 1.42
PNKP-224ENST00000631020 SRGNP10124 158 aa23.89■■□□□ 1.42
PNKP-224ENST00000631020 HLFQ16534 295 aa23.89■■□□□ 1.42
PNKP-224ENST00000631020 KLRG2A4D1S0 409 aaPredicted RBP23.89■■□□□ 1.41
PNKP-224ENST00000631020 SLC4A2P04920 1241 aa23.89■■□□□ 1.41
PNKP-224ENST00000631020 CENPBP07199 599 aaPredicted RBP23.89■■□□□ 1.41
PNKP-224ENST00000631020 CCDC24Q8N4L8 307 aa23.89■■□□□ 1.41
PNKP-224ENST00000631020 SSH1Q8WYL5 1049 aa23.89■■□□□ 1.41
PNKP-224ENST00000631020 CNKSR1Q969H4 720 aa23.89■■□□□ 1.41
PNKP-224ENST00000631020 ZNF622Q969S3 477 aaKnown RBP eCLIP23.89■■□□□ 1.41
PNKP-224ENST00000631020 FER1L6Q2WGJ9 1857 aa23.88■■□□□ 1.41
PNKP-224ENST00000631020 ZNF428Q96B54 188 aa23.88■■□□□ 1.41
PNKP-224ENST00000631020 MASTLQ96GX5 879 aa23.88■■□□□ 1.41
PNKP-224ENST00000631020 PHAXQ9H814 394 aaKnown RBP23.88■■□□□ 1.41
PNKP-224ENST00000631020 RNF181Q9P0P0 153 aa23.88■■□□□ 1.41
PNKP-224ENST00000631020 IBTKQ9P2D0 1353 aaPredicted RBP23.87■■□□□ 1.41
PNKP-224ENST00000631020 RARSP54136 660 aaKnown RBP23.87■■□□□ 1.41
PNKP-224ENST00000631020 STK31Q9BXU1 1019 aa23.87■■□□□ 1.41
PNKP-224ENST00000631020 HYPKQ9NX55 129 aa23.87■■□□□ 1.41
PNKP-224ENST00000631020 LMNB1P20700 586 aa23.86■■□□□ 1.41
PNKP-224ENST00000631020 TTLL7Q6ZT98 887 aa23.86■■□□□ 1.41
PNKP-224ENST00000631020 G2E3Q7L622 706 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms