RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 NGEFQ8N5V2 710 aa11.93□□□□□ -0.5
SPTAN1-219ENST00000629378 PNISRQ8TF01 805 aaKnown RBP11.93□□□□□ -0.5
SPTAN1-219ENST00000629378 BRIP1Q9BX63 1249 aa11.93□□□□□ -0.5
SPTAN1-219ENST00000629378 RRAGCQ9HB90 399 aa11.93□□□□□ -0.5
SPTAN1-219ENST00000629378 FAM177BA6PVY3 158 aa11.92□□□□□ -0.5
SPTAN1-219ENST00000629378 C21orf2O43822 256 aa11.92□□□□□ -0.5
SPTAN1-219ENST00000629378 NFE2L2Q16236 605 aa11.92□□□□□ -0.5
SPTAN1-219ENST00000629378 HLFQ16534 295 aa11.92□□□□□ -0.5
SPTAN1-219ENST00000629378 SLX4Q8IY92 1834 aa11.92□□□□□ -0.5
SPTAN1-219ENST00000629378 NFKBIEO00221 500 aa11.91□□□□□ -0.5
SPTAN1-219ENST00000629378 NPHP1O15259 732 aa11.91□□□□□ -0.5
SPTAN1-219ENST00000629378 TOMM70O94826 608 aa11.91□□□□□ -0.5
SPTAN1-219ENST00000629378 NEFMP07197 916 aa11.91□□□□□ -0.5
SPTAN1-219ENST00000629378 PDE6BP35913 854 aa11.91□□□□□ -0.5
SPTAN1-219ENST00000629378 CNBD1Q8NA66 436 aa11.91□□□□□ -0.5
SPTAN1-219ENST00000629378 KDM3BQ7LBC6 1761 aa11.91□□□□□ -0.5
SPTAN1-219ENST00000629378 EIF4A1P60842 406 aaKnown RBP11.9□□□□□ -0.5
SPTAN1-219ENST00000629378 RRP7AQ9Y3A4 280 aaKnown RBP11.9□□□□□ -0.5
SPTAN1-219ENST00000629378 SRGNP10124 158 aa11.89□□□□□ -0.51
SPTAN1-219ENST00000629378 LMNB1P20700 586 aa11.89□□□□□ -0.51
SPTAN1-219ENST00000629378 ST5P78524 1137 aa11.89□□□□□ -0.51
SPTAN1-219ENST00000629378 HNRNPUQ00839 825 aaKnown RBP eCLIP11.89□□□□□ -0.51
SPTAN1-219ENST00000629378 CLEC4GQ6UXB4 293 aa11.89□□□□□ -0.51
SPTAN1-219ENST00000629378 NBPF5PQ86XG9 351 aaPredicted RBP11.89□□□□□ -0.51
SPTAN1-219ENST00000629378 NIP7Q9Y221 180 aaKnown RBP eCLIP11.89□□□□□ -0.51
SPTAN1-219ENST00000629378 FER1L6Q2WGJ9 1857 aa11.89□□□□□ -0.51
SPTAN1-219ENST00000629378 KDM2BQ8NHM5 1336 aa11.88□□□□□ -0.51
SPTAN1-219ENST00000629378 MAPK8IP3Q9UPT6 1336 aa11.88□□□□□ -0.51
SPTAN1-219ENST00000629378 NUP98P52948 1817 aa11.88□□□□□ -0.51
SPTAN1-219ENST00000629378 LAMB4A4D0S4 1761 aa11.88□□□□□ -0.51
SPTAN1-219ENST00000629378 MYL6BP14649 208 aa11.88□□□□□ -0.51
SPTAN1-219ENST00000629378 RIPK4P57078 832 aa11.88□□□□□ -0.51
SPTAN1-219ENST00000629378 HTRA3P83110 453 aa11.88□□□□□ -0.51
SPTAN1-219ENST00000629378 TTLL7Q6ZT98 887 aa11.88□□□□□ -0.51
SPTAN1-219ENST00000629378 CCDC146Q8IYE0 955 aa11.88□□□□□ -0.51
SPTAN1-219ENST00000629378 TIAM2Q8IVF5 1701 aa11.87□□□□□ -0.51
SPTAN1-219ENST00000629378 STYK1Q6J9G0 422 aa11.87□□□□□ -0.51
SPTAN1-219ENST00000629378 PRPF40BQ6NWY9 871 aaKnown RBP11.87□□□□□ -0.51
SPTAN1-219ENST00000629378 OLFM4Q6UX06 510 aa11.87□□□□□ -0.51
SPTAN1-219ENST00000629378 C16orf71Q8IYS4 520 aaPredicted RBP11.87□□□□□ -0.51
SPTAN1-219ENST00000629378 MASTLQ96GX5 879 aa11.87□□□□□ -0.51
SPTAN1-219ENST00000629378 ZNF652Q9Y2D9 606 aa11.87□□□□□ -0.51
SPTAN1-219ENST00000629378 DICER1Q9UPY3 1922 aaKnown RBP11.87□□□□□ -0.51
SPTAN1-219ENST00000629378 GLTPD2A6NH11 291 aa11.86□□□□□ -0.51
SPTAN1-219ENST00000629378 TMPOP42166 694 aaKnown RBP11.86□□□□□ -0.51
SPTAN1-219ENST00000629378 NEUROD2Q15784 382 aa11.86□□□□□ -0.51
SPTAN1-219ENST00000629378 TPTE2Q6XPS3 522 aa11.86□□□□□ -0.51
SPTAN1-219ENST00000629378 RBM46Q8TBY0 533 aaKnown RBP11.86□□□□□ -0.51
SPTAN1-219ENST00000629378 CNKSR1Q969H4 720 aa11.86□□□□□ -0.51
SPTAN1-219ENST00000629378 PNNQ9H307 717 aaKnown RBP11.86□□□□□ -0.51
SPTAN1-219ENST00000629378 PDZRN3Q9UPQ7 1066 aa11.86□□□□□ -0.51
SPTAN1-219ENST00000629378 TNRC6CQ9HCJ0 1690 aaKnown RBP11.85□□□□□ -0.51
SPTAN1-219ENST00000629378 POTECB2RU33 542 aa11.85□□□□□ -0.51
SPTAN1-219ENST00000629378 ANXA1P04083 346 aa11.85□□□□□ -0.51
SPTAN1-219ENST00000629378 EIF2S2P20042 333 aaKnown RBP11.85□□□□□ -0.51
SPTAN1-219ENST00000629378 GPTP24298 496 aa11.85□□□□□ -0.51
SPTAN1-219ENST00000629378 NUTM1Q86Y26 1132 aa11.85□□□□□ -0.51
SPTAN1-219ENST00000629378 DNAJC5GQ8N7S2 189 aa11.85□□□□□ -0.51
SPTAN1-219ENST00000629378 C7orf43Q8WVR3 580 aa11.85□□□□□ -0.51
SPTAN1-219ENST00000629378 ZBTB3Q9H5J0 574 aa11.85□□□□□ -0.51
SPTAN1-219ENST00000629378 TSPYL4Q9UJ04 414 aa11.85□□□□□ -0.51
SPTAN1-219ENST00000629378 ARFGEF2Q9Y6D5 1785 aa11.84□□□□□ -0.51
SPTAN1-219ENST00000629378 APLP1P51693 650 aa11.84□□□□□ -0.51
SPTAN1-219ENST00000629378 PROSER3Q2NL68 480 aa11.84□□□□□ -0.51
SPTAN1-219ENST00000629378 ERFEQ4G0M1 354 aa11.84□□□□□ -0.51
SPTAN1-219ENST00000629378 NECTIN2Q92692 538 aa11.84□□□□□ -0.51
SPTAN1-219ENST00000629378 MAP3K15Q6ZN16 1313 aa11.84□□□□□ -0.51
SPTAN1-219ENST00000629378 KLRG2A4D1S0 409 aaPredicted RBP11.83□□□□□ -0.52
SPTAN1-219ENST00000629378 VEGFAP15692 232 aaPredicted RBP11.83□□□□□ -0.52
SPTAN1-219ENST00000629378 NPR1P16066 1061 aa11.83□□□□□ -0.52
SPTAN1-219ENST00000629378 GTF2E1P29083 439 aaPredicted RBP11.83□□□□□ -0.52
SPTAN1-219ENST00000629378 WDR43Q15061 677 aaKnown RBP eCLIP11.83□□□□□ -0.522e-6■□□□□ 9.3
SPTAN1-219ENST00000629378 PDIA6Q15084 440 aa11.83□□□□□ -0.52
SPTAN1-219ENST00000629378 KRT24Q2M2I5 525 aa11.83□□□□□ -0.52
SPTAN1-219ENST00000629378 SUSD4Q5VX71 490 aa11.83□□□□□ -0.52
SPTAN1-219ENST00000629378 SLC51AQ86UW1 340 aa11.83□□□□□ -0.52
SPTAN1-219ENST00000629378 TAOK3Q9H2K8 898 aa11.83□□□□□ -0.52
SPTAN1-219ENST00000629378 ADAMTS8Q9UP79 889 aa11.83□□□□□ -0.52
SPTAN1-219ENST00000629378 UBN2Q6ZU65 1347 aa11.83□□□□□ -0.52
SPTAN1-219ENST00000629378 ERVV-1B6SEH8 477 aa11.82□□□□□ -0.52
SPTAN1-219ENST00000629378 DDNO94850 711 aaPredicted RBP11.82□□□□□ -0.52
SPTAN1-219ENST00000629378 KIF6Q6ZMV9 814 aa11.82□□□□□ -0.52
SPTAN1-219ENST00000629378 TRIM35Q9UPQ4 493 aa11.82□□□□□ -0.52
SPTAN1-219ENST00000629378 LAS1LQ9Y4W2 734 aaKnown RBP11.82□□□□□ -0.52
SPTAN1-219ENST00000629378 WDR90Q96KV7 1748 aa11.82□□□□□ -0.52
SPTAN1-219ENST00000629378 ZC3H4Q9UPT8 1303 aaKnown RBP11.82□□□□□ -0.52
SPTAN1-219ENST00000629378 ABCC12Q96J65 1359 aa11.81□□□□□ -0.52
SPTAN1-219ENST00000629378 RGL2O15211 777 aa11.81□□□□□ -0.52
SPTAN1-219ENST00000629378 FSTL1Q12841 308 aa11.81□□□□□ -0.52
SPTAN1-219ENST00000629378 C3orf67Q6ZVT6 689 aa11.81□□□□□ -0.52
SPTAN1-219ENST00000629378 LRP10Q7Z4F1 713 aa11.81□□□□□ -0.52
SPTAN1-219ENST00000629378 ZNF34Q8IZ26 560 aa11.81□□□□□ -0.52
SPTAN1-219ENST00000629378 ZNF428Q96B54 188 aa11.81□□□□□ -0.52
SPTAN1-219ENST00000629378 ZNF277Q9NRM2 450 aaPredicted RBP11.81□□□□□ -0.52
SPTAN1-219ENST00000629378 LTBP3Q9NS15 1303 aa11.81□□□□□ -0.52
SPTAN1-219ENST00000629378 TCERG1O14776 1098 aaKnown RBP11.8□□□□□ -0.52
SPTAN1-219ENST00000629378 DPY19L2Q6NUT2 758 aa11.8□□□□□ -0.52
SPTAN1-219ENST00000629378 SMC1BQ8NDV3 1235 aa11.8□□□□□ -0.52
SPTAN1-219ENST00000629378 RUNDC1Q96C34 613 aa11.8□□□□□ -0.52
SPTAN1-219ENST00000629378 ZBED9Q6R2W3 1325 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms