RNA–Protein interactions for RNA: ENST00000629137.1

SPTAN1-218, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-218ENST00000629137 MYH14Q7Z406 1995 aaKnown RBP12.14□□□□□ -0.47
SPTAN1-218ENST00000629137 CNTNAP4Q9C0A0 1308 aa12.13□□□□□ -0.47
SPTAN1-218ENST00000629137 GNPATO15228 680 aa12.13□□□□□ -0.47
SPTAN1-218ENST00000629137 CYP19A1P11511 503 aaPredicted RBP12.13□□□□□ -0.47
SPTAN1-218ENST00000629137 CRKLP46109 303 aaKnown RBP12.13□□□□□ -0.47
SPTAN1-218ENST00000629137 DPY19L2Q6NUT2 758 aa12.13□□□□□ -0.47
SPTAN1-218ENST00000629137 VSIG10Q8N0Z9 540 aa12.13□□□□□ -0.47
SPTAN1-218ENST00000629137 FMNL2Q96PY5 1086 aa12.13□□□□□ -0.47
SPTAN1-218ENST00000629137 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.12□□□□□ -0.47
SPTAN1-218ENST00000629137 CCER2I3L3R5 266 aa12.12□□□□□ -0.47
SPTAN1-218ENST00000629137 RGL2O15211 777 aa12.12□□□□□ -0.47
SPTAN1-218ENST00000629137 INTS5Q6P9B9 1019 aaKnown RBP12.12□□□□□ -0.47
SPTAN1-218ENST00000629137 LRP5O75197 1615 aa12.11□□□□□ -0.47
SPTAN1-218ENST00000629137 EIF4A1P60842 406 aaKnown RBP12.11□□□□□ -0.47
SPTAN1-218ENST00000629137 RC3H1Q5TC82 1133 aaKnown RBP12.11□□□□□ -0.47
SPTAN1-218ENST00000629137 TSPYL4Q9UJ04 414 aa12.11□□□□□ -0.47
SPTAN1-218ENST00000629137 ZBTB1Q9Y2K1 713 aa12.11□□□□□ -0.47
SPTAN1-218ENST00000629137 SALL2Q9Y467 1007 aaPredicted RBP12.11□□□□□ -0.47
SPTAN1-218ENST00000629137 LAS1LQ9Y4W2 734 aaKnown RBP12.11□□□□□ -0.47
SPTAN1-218ENST00000629137 RPS6KA4O75676 772 aa12.1□□□□□ -0.47
SPTAN1-218ENST00000629137 SSFA2P28290 1259 aa12.1□□□□□ -0.47
SPTAN1-218ENST00000629137 CCDC87Q9NVE4 849 aa12.1□□□□□ -0.47
SPTAN1-218ENST00000629137 RTCBQ9Y3I0 505 aaKnown RBP12.1□□□□□ -0.47
SPTAN1-218ENST00000629137 USP16Q9Y5T5 823 aa12.1□□□□□ -0.47
SPTAN1-218ENST00000629137 C4AP0C0L4 1744 aa12.1□□□□□ -0.47
SPTAN1-218ENST00000629137 CHL1O00533 1208 aa12.09□□□□□ -0.47
SPTAN1-218ENST00000629137 SNRPA1P09661 255 aaKnown RBP12.09□□□□□ -0.47
SPTAN1-218ENST00000629137 HMGB2P26583 209 aaKnown RBP12.09□□□□□ -0.47
SPTAN1-218ENST00000629137 SLAIN1Q8ND83 568 aa12.09□□□□□ -0.47
SPTAN1-218ENST00000629137 ARHGEF1Q92888 912 aaKnown RBP12.09□□□□□ -0.47
SPTAN1-218ENST00000629137 MTFR1LQ9H019 292 aa12.09□□□□□ -0.47
SPTAN1-218ENST00000629137 LAMB4A4D0S4 1761 aa12.09□□□□□ -0.47
SPTAN1-218ENST00000629137 GIGYF1O75420 1035 aaPredicted RBP12.08□□□□□ -0.48
SPTAN1-218ENST00000629137 A1BGP04217 495 aa12.08□□□□□ -0.48
SPTAN1-218ENST00000629137 CANXP27824 592 aaKnown RBP12.08□□□□□ -0.48
SPTAN1-218ENST00000629137 PTGER2P43116 358 aa12.08□□□□□ -0.48
SPTAN1-218ENST00000629137 PIP4K2AP48426 406 aaPredicted RBP12.08□□□□□ -0.48
SPTAN1-218ENST00000629137 KRT24Q2M2I5 525 aa12.08□□□□□ -0.48
SPTAN1-218ENST00000629137 TRAPPC3LQ5T215 181 aa12.08□□□□□ -0.48
SPTAN1-218ENST00000629137 MSL1Q68DK7 614 aa12.08□□□□□ -0.48
SPTAN1-218ENST00000629137 WWC1Q8IX03 1113 aa12.08□□□□□ -0.48
SPTAN1-218ENST00000629137 FLAD1Q8NFF5 587 aa12.08□□□□□ -0.48
SPTAN1-218ENST00000629137 CFAP44Q96MT7 982 aa12.08□□□□□ -0.48
SPTAN1-218ENST00000629137 TEX13AQ9BXU3 409 aaPredicted RBP12.08□□□□□ -0.48
SPTAN1-218ENST00000629137 SPON1Q9HCB6 807 aa12.08□□□□□ -0.48
SPTAN1-218ENST00000629137 COL24A1Q17RW2 1714 aa12.08□□□□□ -0.48
SPTAN1-218ENST00000629137 SOS1Q07889 1333 aaPredicted RBP12.08□□□□□ -0.48
SPTAN1-218ENST00000629137 STARD3NLO95772 234 aa12.07□□□□□ -0.48
SPTAN1-218ENST00000629137 ZNF853P0CG23 659 aa12.07□□□□□ -0.48
SPTAN1-218ENST00000629137 CCDC27Q2M243 656 aa12.07□□□□□ -0.48
SPTAN1-218ENST00000629137 SLC16A10Q8TF71 515 aa12.07□□□□□ -0.48
SPTAN1-218ENST00000629137 MBIPQ9NS73 344 aa12.07□□□□□ -0.48
SPTAN1-218ENST00000629137 BABAM1Q9NWV8 329 aa12.07□□□□□ -0.48
SPTAN1-218ENST00000629137 COL15A1P39059 1388 aa12.06□□□□□ -0.48
SPTAN1-218ENST00000629137 L3MBTL3Q96JM7 780 aaPredicted RBP12.06□□□□□ -0.48
SPTAN1-218ENST00000629137 IFT57Q9NWB7 429 aa12.06□□□□□ -0.48
SPTAN1-218ENST00000629137 SRP68Q9UHB9 627 aaKnown RBP12.06□□□□□ -0.48
SPTAN1-218ENST00000629137 NBPF26B4DH59 902 aa12.05□□□□□ -0.48
SPTAN1-218ENST00000629137 RFC4P35249 363 aa12.05□□□□□ -0.48
SPTAN1-218ENST00000629137 EIF5P55010 431 aaKnown RBP12.05□□□□□ -0.48
SPTAN1-218ENST00000629137 GNAI1P63096 354 aa12.05□□□□□ -0.48
SPTAN1-218ENST00000629137 NBPF10Q6P3W6 841 aaKnown RBP12.05□□□□□ -0.48
SPTAN1-218ENST00000629137 NBPF15Q8N660 670 aa12.05□□□□□ -0.48
SPTAN1-218ENST00000629137 TSR2Q969E8 191 aaKnown RBP12.05□□□□□ -0.48
SPTAN1-218ENST00000629137 ZNF330Q9Y3S2 320 aaPredicted RBP12.05□□□□□ -0.48
SPTAN1-218ENST00000629137 GYS1P13807 737 aa12.04□□□□□ -0.48
SPTAN1-218ENST00000629137 CALD1Q05682 793 aaKnown RBP12.04□□□□□ -0.48
SPTAN1-218ENST00000629137 USP42Q9H9J4 1324 aaKnown RBP12.04□□□□□ -0.48
SPTAN1-218ENST00000629137 IL6STP40189 918 aaPredicted RBP12.03□□□□□ -0.48
SPTAN1-218ENST00000629137 USPL1Q5W0Q7 1092 aa12.03□□□□□ -0.48
SPTAN1-218ENST00000629137 NECTIN2Q92692 538 aa12.03□□□□□ -0.48
SPTAN1-218ENST00000629137 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.03□□□□□ -0.48
SPTAN1-218ENST00000629137 TAOK2Q9UL54 1235 aa12.03□□□□□ -0.48
SPTAN1-218ENST00000629137 STK24Q9Y6E0 443 aa12.03□□□□□ -0.48
SPTAN1-218ENST00000629137 EIF2S2P20042 333 aaKnown RBP12.02□□□□□ -0.49
SPTAN1-218ENST00000629137 LCE2DQ5TA82 110 aaPredicted RBP12.02□□□□□ -0.49
SPTAN1-218ENST00000629137 C8orf58Q8NAV2 365 aa12.02□□□□□ -0.49
SPTAN1-218ENST00000629137 FAM163AQ96GL9 167 aaPredicted RBP12.02□□□□□ -0.49
SPTAN1-218ENST00000629137 PPP1R1BQ9UD71 204 aaPredicted RBP12.02□□□□□ -0.49
SPTAN1-218ENST00000629137 TBC1D2BQ9UPU7 963 aa12.02□□□□□ -0.49
SPTAN1-218ENST00000629137 SCN7AQ01118 1682 aa12.02□□□□□ -0.49
SPTAN1-218ENST00000629137 ZNF521Q96K83 1311 aa12.02□□□□□ -0.49
SPTAN1-218ENST00000629137 GOLGB1Q14789 3259 aaKnown RBP12.01□□□□□ -0.49
SPTAN1-218ENST00000629137 ELL2O00472 640 aaPredicted RBP12.01□□□□□ -0.49
SPTAN1-218ENST00000629137 STK25O00506 426 aa12.01□□□□□ -0.49
SPTAN1-218ENST00000629137 ANXA1P04083 346 aa12.01□□□□□ -0.49
SPTAN1-218ENST00000629137 MYL6BP14649 208 aa12.01□□□□□ -0.49
SPTAN1-218ENST00000629137 POLD1P28340 1107 aa12.01□□□□□ -0.49
SPTAN1-218ENST00000629137 PROSER3Q2NL68 480 aa12.01□□□□□ -0.49
SPTAN1-218ENST00000629137 DUSP27Q5VZP5 1158 aa12.01□□□□□ -0.49
SPTAN1-218ENST00000629137 C3orf67Q6ZVT6 689 aa12.01□□□□□ -0.49
SPTAN1-218ENST00000629137 WDR63Q8IWG1 891 aa12.01□□□□□ -0.49
SPTAN1-218ENST00000629137 TSPYL6Q8N831 410 aa12.01□□□□□ -0.49
SPTAN1-218ENST00000629137 ARXQ96QS3 562 aa12.01□□□□□ -0.49
SPTAN1-218ENST00000629137 BCL2L12Q9HB09 334 aa12.01□□□□□ -0.49
SPTAN1-218ENST00000629137 NARFQ9UHQ1 456 aa12.01□□□□□ -0.49
SPTAN1-218ENST00000629137 IL16Q14005 1332 aa12.01□□□□□ -0.49
SPTAN1-218ENST00000629137 BCORQ6W2J9 1755 aa12□□□□□ -0.49
SPTAN1-218ENST00000629137 ZPR1O75312 459 aa12□□□□□ -0.49
SPTAN1-218ENST00000629137 PDIA6Q15084 440 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms