RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 CARMIL3Q8ND23 1372 aa14.55□□□□□ -0.08
DDX41-219ENST00000629036 WWC1Q8IX03 1113 aa14.54□□□□□ -0.08
DDX41-219ENST00000629036 IFT57Q9NWB7 429 aa14.54□□□□□ -0.08
DDX41-219ENST00000629036 ERBB4Q15303 1308 aa14.54□□□□□ -0.08
DDX41-219ENST00000629036 PCNTO95613 3336 aa14.54□□□□□ -0.08
DDX41-219ENST00000629036 LAMB2P55268 1798 aa14.53□□□□□ -0.08
DDX41-219ENST00000629036 ZNF521Q96K83 1311 aa14.53□□□□□ -0.08
DDX41-219ENST00000629036 PROSER3Q2NL68 480 aa14.53□□□□□ -0.08
DDX41-219ENST00000629036 TBC1D2BQ9UPU7 963 aa14.53□□□□□ -0.08
DDX41-219ENST00000629036 A0A087WZG4 1122 aa14.52□□□□□ -0.09
DDX41-219ENST00000629036 ZPR1O75312 459 aa14.52□□□□□ -0.09
DDX41-219ENST00000629036 HTRA3P83110 453 aa14.52□□□□□ -0.09
DDX41-219ENST00000629036 TBC1D9BQ66K14 1250 aa14.52□□□□□ -0.09
DDX41-219ENST00000629036 CCER2I3L3R5 266 aa14.51□□□□□ -0.09
DDX41-219ENST00000629036 RGL2O15211 777 aa14.51□□□□□ -0.09
DDX41-219ENST00000629036 HOXB7P09629 217 aa14.51□□□□□ -0.09
DDX41-219ENST00000629036 DZIP3Q86Y13 1208 aaKnown RBP14.51□□□□□ -0.09
DDX41-219ENST00000629036 TNS4Q8IZW8 715 aa14.51□□□□□ -0.09
DDX41-219ENST00000629036 IL16Q14005 1332 aa14.5□□□□□ -0.09
DDX41-219ENST00000629036 TTLL7Q6ZT98 887 aa14.5□□□□□ -0.09
DDX41-219ENST00000629036 FAM9BQ8IZU0 186 aa14.5□□□□□ -0.09
DDX41-219ENST00000629036 DDX60Q8IY21 1712 aaKnown RBP14.49□□□□□ -0.09
DDX41-219ENST00000629036 SBF1O95248 1867 aa14.49□□□□□ -0.09
DDX41-219ENST00000629036 TOMM70O94826 608 aa14.49□□□□□ -0.09
DDX41-219ENST00000629036 ANXA1P04083 346 aa14.49□□□□□ -0.09
DDX41-219ENST00000629036 KCNA3P22001 575 aa14.49□□□□□ -0.09
DDX41-219ENST00000629036 GNAI1P63096 354 aa14.49□□□□□ -0.09
DDX41-219ENST00000629036 HLFQ16534 295 aa14.49□□□□□ -0.09
DDX41-219ENST00000629036 SPINK5Q9NQ38 1064 aaPredicted RBP14.49□□□□□ -0.09
DDX41-219ENST00000629036 ZNF330Q9Y3S2 320 aaPredicted RBP14.49□□□□□ -0.09
DDX41-219ENST00000629036 LAS1LQ9Y4W2 734 aaKnown RBP14.49□□□□□ -0.09
DDX41-219ENST00000629036 PARP3Q9Y6F1 533 aa14.49□□□□□ -0.09
DDX41-219ENST00000629036 C8orf58Q8NAV2 365 aa14.48□□□□□ -0.09
DDX41-219ENST00000629036 TSR2Q969E8 191 aaKnown RBP14.48□□□□□ -0.09
DDX41-219ENST00000629036 MAP3K15Q6ZN16 1313 aa14.47□□□□□ -0.09
DDX41-219ENST00000629036 CALD1Q05682 793 aaKnown RBP14.47□□□□□ -0.09
DDX41-219ENST00000629036 DUSP27Q5VZP5 1158 aa14.47□□□□□ -0.09
DDX41-219ENST00000629036 CLEC4GQ6UXB4 293 aa14.47□□□□□ -0.09
DDX41-219ENST00000629036 TSPYL6Q8N831 410 aa14.47□□□□□ -0.09
DDX41-219ENST00000629036 NMRK2Q9NPI5 230 aa14.47□□□□□ -0.09
DDX41-219ENST00000629036 FER1L6Q2WGJ9 1857 aa14.46□□□□□ -0.09
DDX41-219ENST00000629036 UBN2Q6ZU65 1347 aa14.46□□□□□ -0.09
DDX41-219ENST00000629036 FANCIQ9NVI1 1328 aa14.46□□□□□ -0.09
DDX41-219ENST00000629036 SLX4Q8IY92 1834 aa14.46□□□□□ -0.09
DDX41-219ENST00000629036 SERPINB2P05120 415 aa14.46□□□□□ -0.09
DDX41-219ENST00000629036 MYL6BP14649 208 aa14.46□□□□□ -0.09
DDX41-219ENST00000629036 EIF2S2P20042 333 aaKnown RBP14.46□□□□□ -0.09
DDX41-219ENST00000629036 PRELPP51888 382 aa14.46□□□□□ -0.09
DDX41-219ENST00000629036 DDX21Q9NR30 783 aaKnown RBP eCLIP14.46□□□□□ -0.09
DDX41-219ENST00000629036 CHPF2Q9P2E5 772 aa14.46□□□□□ -0.09
DDX41-219ENST00000629036 CCDC88AQ3V6T2 1871 aa14.46□□□□□ -0.1
DDX41-219ENST00000629036 ERVV-1B6SEH8 477 aa14.45□□□□□ -0.1
DDX41-219ENST00000629036 DIEXFQ68CQ4 756 aaKnown RBP14.45□□□□□ -0.1
DDX41-219ENST00000629036 PRR5LQ6MZQ0 368 aa14.45□□□□□ -0.1
DDX41-219ENST00000629036 WDR63Q8IWG1 891 aa14.45□□□□□ -0.1
DDX41-219ENST00000629036 MIER1Q8N108 512 aa14.45□□□□□ -0.1
DDX41-219ENST00000629036 NECTIN2Q92692 538 aa14.45□□□□□ -0.1
DDX41-219ENST00000629036 KLRG1Q96E93 195 aa14.45□□□□□ -0.1
DDX41-219ENST00000629036 IBTKQ9P2D0 1353 aaPredicted RBP14.45□□□□□ -0.1
DDX41-219ENST00000629036 RIC1Q4ADV7 1423 aa14.44□□□□□ -0.1
DDX41-219ENST00000629036 DPEP1P16444 411 aa14.44□□□□□ -0.1
DDX41-219ENST00000629036 TGFB2P61812 414 aa14.44□□□□□ -0.1
DDX41-219ENST00000629036 HDGFL1Q5TGJ6 251 aa14.44□□□□□ -0.1
DDX41-219ENST00000629036 BICDL1Q6ZP65 573 aa14.44□□□□□ -0.1
DDX41-219ENST00000629036 ABCC12Q96J65 1359 aa14.44□□□□□ -0.1
DDX41-219ENST00000629036 A0A0G2JLW4 131 aa14.43□□□□□ -0.1
DDX41-219ENST00000629036 NGEFQ8N5V2 710 aa14.43□□□□□ -0.1
DDX41-219ENST00000629036 TAF1P21675 1872 aa14.42□□□□□ -0.1
DDX41-219ENST00000629036 CHRNA5P30532 468 aa14.42□□□□□ -0.1
DDX41-219ENST00000629036 GIGYF2Q6Y7W6 1299 aaKnown RBP14.42□□□□□ -0.1
DDX41-219ENST00000629036 C16orf71Q8IYS4 520 aaPredicted RBP14.42□□□□□ -0.1
DDX41-219ENST00000629036 ZNF34Q8IZ26 560 aa14.42□□□□□ -0.1
DDX41-219ENST00000629036 XAGE3Q8WTP9 111 aa14.42□□□□□ -0.1
DDX41-219ENST00000629036 ZBTB3Q9H5J0 574 aa14.42□□□□□ -0.1
DDX41-219ENST00000629036 SALL2Q9Y467 1007 aaPredicted RBP14.42□□□□□ -0.1
DDX41-219ENST00000629036 DICER1Q9UPY3 1922 aaKnown RBP14.42□□□□□ -0.1
DDX41-219ENST00000629036 COPS6Q7L5N1 327 aa14.41□□□□□ -0.1
DDX41-219ENST00000629036 JMYQ8N9B5 988 aa14.41□□□□□ -0.1
DDX41-219ENST00000629036 SETDB2Q96T68 719 aa14.41□□□□□ -0.1
DDX41-219ENST00000629036 ZNF652Q9Y2D9 606 aa14.41□□□□□ -0.1
DDX41-219ENST00000629036 COL4A1P02462 1669 aa14.41□□□□□ -0.1
DDX41-219ENST00000629036 MYH3P11055 1940 aa14.41□□□□□ -0.1
DDX41-219ENST00000629036 ELL2O00472 640 aaPredicted RBP14.4□□□□□ -0.1
DDX41-219ENST00000629036 KIF6Q6ZMV9 814 aa14.4□□□□□ -0.1
DDX41-219ENST00000629036 ARHGAP27Q6ZUM4 889 aa14.4□□□□□ -0.1
DDX41-219ENST00000629036 CCDC24Q8N4L8 307 aa14.4□□□□□ -0.1
DDX41-219ENST00000629036 DBF4Q9UBU7 674 aaPredicted RBP14.4□□□□□ -0.1
DDX41-219ENST00000629036 NIP7Q9Y221 180 aaKnown RBP eCLIP14.4□□□□□ -0.1
DDX41-219ENST00000629036 BCS1LQ9Y276 419 aa14.4□□□□□ -0.1
DDX41-219ENST00000629036 TIAM2Q8IVF5 1701 aa14.39□□□□□ -0.11
DDX41-219ENST00000629036 KLRG2A4D1S0 409 aaPredicted RBP14.39□□□□□ -0.11
DDX41-219ENST00000629036 NTSR2O95665 410 aa14.39□□□□□ -0.11
DDX41-219ENST00000629036 CNBD1Q8NA66 436 aa14.39□□□□□ -0.11
DDX41-219ENST00000629036 RBM46Q8TBY0 533 aaKnown RBP14.39□□□□□ -0.11
DDX41-219ENST00000629036 BRIP1Q9BX63 1249 aa14.39□□□□□ -0.11
DDX41-219ENST00000629036 SNED1Q8TER0 1413 aa14.39□□□□□ -0.11
DDX41-219ENST00000629036 LRRC37AA6NMS7 1700 aa14.38□□□□□ -0.11
DDX41-219ENST00000629036 TWISTNBQ3B726 338 aaPredicted RBP14.38□□□□□ -0.11
DDX41-219ENST00000629036 NPM2Q86SE8 214 aaKnown RBP14.38□□□□□ -0.11
DDX41-219ENST00000629036 PHAXQ9H814 394 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms