RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 NRXN2Q9P2S2 1712 aa8.79□□□□□ -1
LINC00649-220ENST00000628906 ZNF831Q5JPB2 1677 aa8.78□□□□□ -1
LINC00649-220ENST00000628906 H0YGN5 161 aa8.78□□□□□ -1
LINC00649-220ENST00000628906 SAMD1Q6SPF0 538 aaPredicted RBP8.78□□□□□ -1
LINC00649-220ENST00000628906 CHRDL2Q6WN34 429 aa8.78□□□□□ -1
LINC00649-220ENST00000628906 CSRNP1Q96S65 589 aa8.78□□□□□ -1
LINC00649-220ENST00000628906 HDAC9Q9UKV0 1011 aa8.78□□□□□ -1
LINC00649-220ENST00000628906 RGPD2P0DJD1 1756 aa8.78□□□□□ -1
LINC00649-220ENST00000628906 AFDNP55196 1824 aaKnown RBP8.77□□□□□ -1
LINC00649-220ENST00000628906 PLA2G5P39877 138 aa8.77□□□□□ -1.01
LINC00649-220ENST00000628906 EPS15P42566 896 aa8.77□□□□□ -1.01
LINC00649-220ENST00000628906 USPL1Q5W0Q7 1092 aa8.77□□□□□ -1.01
LINC00649-220ENST00000628906 USHBP1Q8N6Y0 703 aa8.77□□□□□ -1.01
LINC00649-220ENST00000628906 ZNF296Q8WUU4 475 aaPredicted RBP8.77□□□□□ -1.01
LINC00649-220ENST00000628906 C7orf43Q8WVR3 580 aa8.77□□□□□ -1.01
LINC00649-220ENST00000628906 CCDC102AQ96A19 550 aa8.77□□□□□ -1.01
LINC00649-220ENST00000628906 RBM42Q9BTD8 480 aaKnown RBP8.77□□□□□ -1.01
LINC00649-220ENST00000628906 PGAP2Q9UHJ9 254 aa8.77□□□□□ -1.01
LINC00649-220ENST00000628906 AKAP11Q9UKA4 1901 aa8.76□□□□□ -1.01
LINC00649-220ENST00000628906 ZPR1O75312 459 aa8.76□□□□□ -1.01
LINC00649-220ENST00000628906 PDE6BP35913 854 aa8.76□□□□□ -1.01
LINC00649-220ENST00000628906 CRKLP46109 303 aaKnown RBP8.76□□□□□ -1.01
LINC00649-220ENST00000628906 SCNN1DP51172 638 aa8.76□□□□□ -1.01
LINC00649-220ENST00000628906 HUNKP57058 714 aa8.76□□□□□ -1.01
LINC00649-220ENST00000628906 RGMBQ6NW40 437 aa8.76□□□□□ -1.01
LINC00649-220ENST00000628906 CNKSR1Q969H4 720 aa8.76□□□□□ -1.01
LINC00649-220ENST00000628906 BRIP1Q9BX63 1249 aa8.76□□□□□ -1.01
LINC00649-220ENST00000628906 PRO3102Q9H379 93 aa8.76□□□□□ -1.01
LINC00649-220ENST00000628906 ERBB4Q15303 1308 aa8.76□□□□□ -1.01
LINC00649-220ENST00000628906 EVC2Q86UK5 1308 aa8.76□□□□□ -1.01
LINC00649-220ENST00000628906 MUC3AQ02505 3323 aa8.75□□□□□ -1.01
LINC00649-220ENST00000628906 CARMIL3Q8ND23 1372 aa8.75□□□□□ -1.01
LINC00649-220ENST00000628906 SBNO2Q9Y2G9 1366 aa8.75□□□□□ -1.01
LINC00649-220ENST00000628906 COL5A3P25940 1745 aaPredicted RBP8.75□□□□□ -1.01
LINC00649-220ENST00000628906 EN2P19622 333 aaPredicted RBP8.75□□□□□ -1.01
LINC00649-220ENST00000628906 LMOD1P29536 600 aaPredicted RBP8.75□□□□□ -1.01
LINC00649-220ENST00000628906 AMPHP49418 695 aa8.75□□□□□ -1.01
LINC00649-220ENST00000628906 FKBP4Q02790 459 aaKnown RBP eCLIP8.75□□□□□ -1.01
LINC00649-220ENST00000628906 NOM1Q5C9Z4 860 aaKnown RBP8.75□□□□□ -1.01
LINC00649-220ENST00000628906 REM2Q8IYK8 340 aaPredicted RBP8.75□□□□□ -1.01
LINC00649-220ENST00000628906 PRPF40BQ6NWY9 871 aaKnown RBP8.74□□□□□ -1.01
LINC00649-220ENST00000628906 ANKRD13DQ6ZTN6 518 aa8.74□□□□□ -1.01
LINC00649-220ENST00000628906 GLIS2Q9BZE0 524 aaPredicted RBP8.74□□□□□ -1.01
LINC00649-220ENST00000628906 ZNF277Q9NRM2 450 aaPredicted RBP8.74□□□□□ -1.01
LINC00649-220ENST00000628906 STXBP5LQ9Y2K9 1186 aa8.74□□□□□ -1.01
LINC00649-220ENST00000628906 SLX4Q8IY92 1834 aa8.73□□□□□ -1.01
LINC00649-220ENST00000628906 STYK1Q6J9G0 422 aa8.73□□□□□ -1.01
LINC00649-220ENST00000628906 INTS5Q6P9B9 1019 aaKnown RBP8.73□□□□□ -1.01
LINC00649-220ENST00000628906 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.73□□□□□ -1.01
LINC00649-220ENST00000628906 BCL2L12Q9HB09 334 aa8.73□□□□□ -1.01
LINC00649-220ENST00000628906 NARFQ9UHQ1 456 aa8.73□□□□□ -1.01
LINC00649-220ENST00000628906 PIEZO1Q92508 2521 aa8.73□□□□□ -1.01
LINC00649-220ENST00000628906 SCN11AQ9UI33 1791 aa8.72□□□□□ -1.01
LINC00649-220ENST00000628906 SRGNP10124 158 aa8.72□□□□□ -1.01
LINC00649-220ENST00000628906 FBLN1P23142 703 aa8.72□□□□□ -1.01
LINC00649-220ENST00000628906 CCDC93Q567U6 631 aa8.72□□□□□ -1.01
LINC00649-220ENST00000628906 GPR153Q6NV75 609 aa8.72□□□□□ -1.01
LINC00649-220ENST00000628906 FAM122AQ96E09 287 aa8.72□□□□□ -1.01
LINC00649-220ENST00000628906 SNX27Q96L92 541 aa8.72□□□□□ -1.01
LINC00649-220ENST00000628906 ZNF408Q9H9D4 720 aa8.72□□□□□ -1.01
LINC00649-220ENST00000628906 ADARB2Q9NS39 739 aaKnown RBP8.72□□□□□ -1.01
LINC00649-220ENST00000628906 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.72□□□□□ -1.01
LINC00649-220ENST00000628906 RBBP6Q7Z6E9 1792 aaKnown RBP8.71□□□□□ -1.01
LINC00649-220ENST00000628906 A0A1W2PPC1 479 aa8.71□□□□□ -1.02
LINC00649-220ENST00000628906 SOX1O00570 391 aaPredicted RBP8.71□□□□□ -1.02
LINC00649-220ENST00000628906 IARSP41252 1262 aaKnown RBP8.71□□□□□ -1.02
LINC00649-220ENST00000628906 CDC37L1Q7L3B6 337 aa8.71□□□□□ -1.02
LINC00649-220ENST00000628906 ZC3H15Q8WU90 426 aaKnown RBP8.71□□□□□ -1.02
LINC00649-220ENST00000628906 SPG7Q9UQ90 795 aa8.71□□□□□ -1.02
LINC00649-220ENST00000628906 GJA3Q9Y6H8 435 aa8.71□□□□□ -1.02
LINC00649-220ENST00000628906 MON2Q7Z3U7 1717 aa8.71□□□□□ -1.02
LINC00649-220ENST00000628906 PAPPA2Q9BXP8 1791 aa8.71□□□□□ -1.02
LINC00649-220ENST00000628906 GPR25O00155 361 aa8.7□□□□□ -1.02
LINC00649-220ENST00000628906 ZNF157P51786 506 aaPredicted RBP8.7□□□□□ -1.02
LINC00649-220ENST00000628906 EIF6P56537 245 aaKnown RBP8.7□□□□□ -1.02
LINC00649-220ENST00000628906 RTKN2Q8IZC4 609 aa8.7□□□□□ -1.02
LINC00649-220ENST00000628906 CCDC24Q8N4L8 307 aa8.7□□□□□ -1.02
LINC00649-220ENST00000628906 JDP2Q8WYK2 163 aa8.7□□□□□ -1.02
LINC00649-220ENST00000628906 MASTLQ96GX5 879 aa8.7□□□□□ -1.02
LINC00649-220ENST00000628906 LRCH3Q96II8 777 aa8.7□□□□□ -1.02
LINC00649-220ENST00000628906 RAPGEFL1Q9UHV5 662 aa8.7□□□□□ -1.02
LINC00649-220ENST00000628906 ANKRD31Q8N7Z5 1873 aa8.69□□□□□ -1.02
LINC00649-220ENST00000628906 ERVV-2B6SEH9 535 aa8.69□□□□□ -1.02
LINC00649-220ENST00000628906 TBC1D8O95759 1140 aa8.69□□□□□ -1.02
LINC00649-220ENST00000628906 SLC10A3P09131 477 aa8.69□□□□□ -1.02
LINC00649-220ENST00000628906 PHKG2P15735 406 aa8.69□□□□□ -1.02
LINC00649-220ENST00000628906 IFNL2Q8IZJ0 200 aa8.69□□□□□ -1.02
LINC00649-220ENST00000628906 RTL1A6NKG5 1358 aa8.69□□□□□ -1.02
LINC00649-220ENST00000628906 CACNA1SQ13698 1873 aa8.68□□□□□ -1.02
LINC00649-220ENST00000628906 PRR5LQ6MZQ0 368 aa8.68□□□□□ -1.02
LINC00649-220ENST00000628906 ARMC5Q96C12 935 aa8.68□□□□□ -1.02
LINC00649-220ENST00000628906 GBA2Q9HCG7 927 aaPredicted RBP8.68□□□□□ -1.02
LINC00649-220ENST00000628906 GPRC5DQ9NZD1 345 aa8.68□□□□□ -1.02
LINC00649-220ENST00000628906 SOS1Q07889 1333 aaPredicted RBP8.68□□□□□ -1.02
LINC00649-220ENST00000628906 FKTNO75072 461 aa8.67□□□□□ -1.02
LINC00649-220ENST00000628906 PTCD1O75127 700 aaKnown RBP8.67□□□□□ -1.02
LINC00649-220ENST00000628906 ATXN8OSP0DMR3 200 aa8.67□□□□□ -1.02
LINC00649-220ENST00000628906 HIRAP54198 1017 aaPredicted RBP8.67□□□□□ -1.02
LINC00649-220ENST00000628906 EDC4Q6P2E9 1401 aaKnown RBP8.67□□□□□ -1.02
LINC00649-220ENST00000628906 DEFB123Q8N688 67 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms