RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 TTLL7Q6ZT98 887 aa21.7■■□□□ 1.06
UBE3D-208ENST00000626828 MAP3K15Q6ZN16 1313 aa21.7■■□□□ 1.06
UBE3D-208ENST00000626828 YBX3P16989 372 aaKnown RBP eCLIP21.69■■□□□ 1.06
UBE3D-208ENST00000626828 NIP7Q9Y221 180 aaKnown RBP eCLIP21.69■■□□□ 1.06
UBE3D-208ENST00000626828 CARMIL3Q8ND23 1372 aa21.69■■□□□ 1.06
UBE3D-208ENST00000626828 AFDNP55196 1824 aaKnown RBP21.69■■□□□ 1.06
UBE3D-208ENST00000626828 ELL2O00472 640 aaPredicted RBP21.68■■□□□ 1.06
UBE3D-208ENST00000626828 DIEXFQ68CQ4 756 aaKnown RBP21.68■■□□□ 1.06
UBE3D-208ENST00000626828 TPTE2Q6XPS3 522 aa21.68■■□□□ 1.06
UBE3D-208ENST00000626828 LRP10Q7Z4F1 713 aa21.68■■□□□ 1.06
UBE3D-208ENST00000626828 PIM2Q9P1W9 311 aa21.68■■□□□ 1.06
UBE3D-208ENST00000626828 DBF4Q9UBU7 674 aaPredicted RBP21.68■■□□□ 1.06
UBE3D-208ENST00000626828 NPHP1O15259 732 aa21.67■■□□□ 1.06
UBE3D-208ENST00000626828 ANXA1P04083 346 aa21.67■■□□□ 1.06
UBE3D-208ENST00000626828 KCNA3P22001 575 aa21.67■■□□□ 1.06
UBE3D-208ENST00000626828 PROSER3Q2NL68 480 aa21.67■■□□□ 1.06
UBE3D-208ENST00000626828 COPS6Q7L5N1 327 aa21.67■■□□□ 1.06
UBE3D-208ENST00000626828 BRIP1Q9BX63 1249 aa21.67■■□□□ 1.06
UBE3D-208ENST00000626828 PDZRN3Q9UPQ7 1066 aa21.67■■□□□ 1.06
UBE3D-208ENST00000626828 PXDNLA1KZ92 1463 aa21.66■■□□□ 1.06
UBE3D-208ENST00000626828 PRR5LQ6MZQ0 368 aa21.66■■□□□ 1.06
UBE3D-208ENST00000626828 GIGYF2Q6Y7W6 1299 aaKnown RBP21.66■■□□□ 1.06
UBE3D-208ENST00000626828 NBPF5PQ86XG9 351 aaPredicted RBP21.66■■□□□ 1.06
UBE3D-208ENST00000626828 C8orf58Q8NAV2 365 aa21.66■■□□□ 1.06
UBE3D-208ENST00000626828 ZBTB3Q9H5J0 574 aa21.66■■□□□ 1.06
UBE3D-208ENST00000626828 SCN7AQ01118 1682 aa21.66■■□□□ 1.06
UBE3D-208ENST00000626828 PDE6BP35913 854 aa21.65■■□□□ 1.06
UBE3D-208ENST00000626828 AIMP1Q12904 312 aaKnown RBP21.65■■□□□ 1.06
UBE3D-208ENST00000626828 CNBD1Q8NA66 436 aa21.65■■□□□ 1.06
UBE3D-208ENST00000626828 XAGE3Q8WTP9 111 aa21.65■■□□□ 1.06
UBE3D-208ENST00000626828 HYPKQ9NX55 129 aa21.65■■□□□ 1.06
UBE3D-208ENST00000626828 CHPF2Q9P2E5 772 aa21.65■■□□□ 1.06
UBE3D-208ENST00000626828 WWC3Q9ULE0 1092 aa21.65■■□□□ 1.06
UBE3D-208ENST00000626828 NRXN2Q9P2S2 1712 aa21.64■■□□□ 1.06
UBE3D-208ENST00000626828 H0YIN7 160 aa21.64■■□□□ 1.05
UBE3D-208ENST00000626828 YY1P25490 414 aa21.64■■□□□ 1.05
UBE3D-208ENST00000626828 CHRNA5P30532 468 aa21.64■■□□□ 1.05
UBE3D-208ENST00000626828 ST5P78524 1137 aa21.64■■□□□ 1.05
UBE3D-208ENST00000626828 TSR2Q969E8 191 aaKnown RBP21.64■■□□□ 1.05
UBE3D-208ENST00000626828 BCS1LQ9Y276 419 aa21.64■■□□□ 1.05
UBE3D-208ENST00000626828 BCORQ6W2J9 1755 aa21.64■■□□□ 1.05
UBE3D-208ENST00000626828 N4BP2Q86UW6 1770 aaPredicted RBP21.64■■□□□ 1.05
UBE3D-208ENST00000626828 CHD4Q14839 1912 aa21.63■■□□□ 1.05
UBE3D-208ENST00000626828 NUP98P52948 1817 aa21.63■■□□□ 1.05
UBE3D-208ENST00000626828 GTF2E1P29083 439 aaPredicted RBP21.62■■□□□ 1.05
UBE3D-208ENST00000626828 DALRD3Q5D0E6 543 aaKnown RBP21.62■■□□□ 1.05
UBE3D-208ENST00000626828 CCDC30Q5VVM6 783 aa21.62■■□□□ 1.05
UBE3D-208ENST00000626828 C2CD5Q86YS7 1000 aa21.62■■□□□ 1.05
UBE3D-208ENST00000626828 ZNF34Q8IZ26 560 aa21.62■■□□□ 1.05
UBE3D-208ENST00000626828 HSP90AB3PQ58FF7 597 aa21.61■■□□□ 1.05
UBE3D-208ENST00000626828 ANKRD13DQ6ZTN6 518 aa21.61■■□□□ 1.05
UBE3D-208ENST00000626828 CCDC24Q8N4L8 307 aa21.61■■□□□ 1.05
UBE3D-208ENST00000626828 TSPYL6Q8N831 410 aa21.61■■□□□ 1.05
UBE3D-208ENST00000626828 NYXQ9GZU5 481 aa21.61■■□□□ 1.05
UBE3D-208ENST00000626828 FAM177BA6PVY3 158 aa21.6■■□□□ 1.05
UBE3D-208ENST00000626828 GOLGA2Q08379 1002 aa21.6■■□□□ 1.05
UBE3D-208ENST00000626828 GPTP24298 496 aa21.59■■□□□ 1.05
UBE3D-208ENST00000626828 TWISTNBQ3B726 338 aaPredicted RBP21.59■■□□□ 1.05
UBE3D-208ENST00000626828 PARP10Q53GL7 1025 aa21.59■■□□□ 1.05
UBE3D-208ENST00000626828 PLBD2Q8NHP8 589 aa21.59■■□□□ 1.05
UBE3D-208ENST00000626828 MYH16Q9H6N6 1097 aa21.59■■□□□ 1.05
UBE3D-208ENST00000626828 KIAA1551Q9HCM1 1747 aa21.59■■□□□ 1.05
UBE3D-208ENST00000626828 ATP10DQ9P241 1426 aa21.58■■□□□ 1.05
UBE3D-208ENST00000626828 TCIRG1Q13488 830 aa21.58■■□□□ 1.05
UBE3D-208ENST00000626828 PPP1R42Q7Z4L9 355 aa21.58■■□□□ 1.05
UBE3D-208ENST00000626828 MIER1Q8N108 512 aa21.58■■□□□ 1.05
UBE3D-208ENST00000626828 TTLL6Q8N841 843 aa21.58■■□□□ 1.05
UBE3D-208ENST00000626828 SUSD4Q5VX71 490 aa21.57■■□□□ 1.04
UBE3D-208ENST00000626828 ZNF622Q969S3 477 aaKnown RBP eCLIP21.57■■□□□ 1.04
UBE3D-208ENST00000626828 FANCIQ9NVI1 1328 aa21.56■■□□□ 1.04
UBE3D-208ENST00000626828 ARHGAP27Q6ZUM4 889 aa21.56■■□□□ 1.04
UBE3D-208ENST00000626828 STK31Q9BXU1 1019 aa21.56■■□□□ 1.04
UBE3D-208ENST00000626828 KLRG2A4D1S0 409 aaPredicted RBP21.55■■□□□ 1.04
UBE3D-208ENST00000626828 PHAXQ9H814 394 aaKnown RBP21.55■■□□□ 1.04
UBE3D-208ENST00000626828 SPINK5Q9NQ38 1064 aaPredicted RBP21.55■■□□□ 1.04
UBE3D-208ENST00000626828 ZNF521Q96K83 1311 aa21.55■■□□□ 1.04
UBE3D-208ENST00000626828 BRCA1P38398 1863 aaKnown RBP21.54■■□□□ 1.04
UBE3D-208ENST00000626828 SRGNP10124 158 aa21.54■■□□□ 1.04
UBE3D-208ENST00000626828 EXOSC9Q06265 439 aaKnown RBP21.54■■□□□ 1.04
UBE3D-208ENST00000626828 STYK1Q6J9G0 422 aa21.54■■□□□ 1.04
UBE3D-208ENST00000626828 CNKSR1Q969H4 720 aa21.54■■□□□ 1.04
UBE3D-208ENST00000626828 MASTLQ96GX5 879 aa21.54■■□□□ 1.04
UBE3D-208ENST00000626828 UTP14AQ9BVJ6 771 aaKnown RBP21.54■■□□□ 1.04
UBE3D-208ENST00000626828 UBN2Q6ZU65 1347 aa21.54■■□□□ 1.04
UBE3D-208ENST00000626828 GOLGB1Q14789 3259 aaKnown RBP21.53■■□□□ 1.04
UBE3D-208ENST00000626828 UTRNP46939 3433 aa21.53■■□□□ 1.04
UBE3D-208ENST00000626828 VAMP4O75379 141 aa21.53■■□□□ 1.04
UBE3D-208ENST00000626828 RIC3Q7Z5B4 369 aa21.53■■□□□ 1.04
UBE3D-208ENST00000626828 NUTM1Q86Y26 1132 aa21.53■■□□□ 1.04
UBE3D-208ENST00000626828 ANKRD31Q8N7Z5 1873 aa21.53■■□□□ 1.04
UBE3D-208ENST00000626828 IBTKQ9P2D0 1353 aaPredicted RBP21.52■■□□□ 1.04
UBE3D-208ENST00000626828 DDX58O95786 925 aaKnown RBP21.52■■□□□ 1.04
UBE3D-208ENST00000626828 NPR1P16066 1061 aa21.52■■□□□ 1.04
UBE3D-208ENST00000626828 ERFEQ4G0M1 354 aa21.52■■□□□ 1.04
UBE3D-208ENST00000626828 NLRP10Q86W26 655 aa21.52■■□□□ 1.04
UBE3D-208ENST00000626828 NTSR2O95665 410 aa21.51■■□□□ 1.03
UBE3D-208ENST00000626828 SLC4A2P04920 1241 aa21.51■■□□□ 1.03
UBE3D-208ENST00000626828 TRIM28Q13263 835 aaKnown RBP21.51■■□□□ 1.03
UBE3D-208ENST00000626828 SLC10A5Q5PT55 438 aa21.51■■□□□ 1.03
UBE3D-208ENST00000626828 ARFGEF1Q9Y6D6 1849 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms