RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 LRP10Q7Z4F1 713 aa25.9■■□□□ 1.74
PNKP-219ENST00000626274 SETDB2Q96T68 719 aa25.9■■□□□ 1.74
PNKP-219ENST00000626274 MAP3K15Q6ZN16 1313 aa25.89■■□□□ 1.74
PNKP-219ENST00000626274 ERVV-1B6SEH8 477 aa25.89■■□□□ 1.74
PNKP-219ENST00000626274 ELL2O00472 640 aaPredicted RBP25.89■■□□□ 1.74
PNKP-219ENST00000626274 ANXA1P04083 346 aa25.89■■□□□ 1.74
PNKP-219ENST00000626274 TGFB2P61812 414 aa25.89■■□□□ 1.74
PNKP-219ENST00000626274 C8orf58Q8NAV2 365 aa25.89■■□□□ 1.74
PNKP-219ENST00000626274 CARMIL3Q8ND23 1372 aa25.88■■□□□ 1.73
PNKP-219ENST00000626274 CHPF2Q9P2E5 772 aa25.88■■□□□ 1.73
PNKP-219ENST00000626274 KIAA1551Q9HCM1 1747 aa25.88■■□□□ 1.73
PNKP-219ENST00000626274 N4BP2Q86UW6 1770 aaPredicted RBP25.87■■□□□ 1.73
PNKP-219ENST00000626274 HLFQ16534 295 aa25.87■■□□□ 1.73
PNKP-219ENST00000626274 CHMP4AQ9BY43 222 aa25.87■■□□□ 1.73
PNKP-219ENST00000626274 DBF4Q9UBU7 674 aaPredicted RBP25.87■■□□□ 1.73
PNKP-219ENST00000626274 GPR162Q16538 588 aa25.86■■□□□ 1.73
PNKP-219ENST00000626274 ZBTB3Q9H5J0 574 aa25.86■■□□□ 1.73
PNKP-219ENST00000626274 PXDNLA1KZ92 1463 aa25.85■■□□□ 1.73
PNKP-219ENST00000626274 PELP1Q8IZL8 1130 aaKnown RBP25.85■■□□□ 1.73
PNKP-219ENST00000626274 TSPYL6Q8N831 410 aa25.85■■□□□ 1.73
PNKP-219ENST00000626274 NIP7Q9Y221 180 aaKnown RBP eCLIP25.85■■□□□ 1.73
PNKP-219ENST00000626274 FANCIQ9NVI1 1328 aa25.85■■□□□ 1.73
PNKP-219ENST00000626274 COPS6Q7L5N1 327 aa25.84■■□□□ 1.73
PNKP-219ENST00000626274 AIMP1Q12904 312 aaKnown RBP25.83■■□□□ 1.73
PNKP-219ENST00000626274 XAGE3Q8WTP9 111 aa25.83■■□□□ 1.73
PNKP-219ENST00000626274 HYPKQ9NX55 129 aa25.83■■□□□ 1.73
PNKP-219ENST00000626274 ZNF521Q96K83 1311 aa25.83■■□□□ 1.73
PNKP-219ENST00000626274 A0A0G2JLW4 131 aa25.82■■□□□ 1.72
PNKP-219ENST00000626274 DPEP1P16444 411 aa25.82■■□□□ 1.72
PNKP-219ENST00000626274 GOLGA2Q08379 1002 aa25.82■■□□□ 1.72
PNKP-219ENST00000626274 CCDC30Q5VVM6 783 aa25.82■■□□□ 1.72
PNKP-219ENST00000626274 GIGYF2Q6Y7W6 1299 aaKnown RBP25.82■■□□□ 1.72
PNKP-219ENST00000626274 MYH16Q9H6N6 1097 aa25.82■■□□□ 1.72
PNKP-219ENST00000626274 ATP10DQ9P241 1426 aa25.81■■□□□ 1.72
PNKP-219ENST00000626274 NPHP1O15259 732 aa25.81■■□□□ 1.72
PNKP-219ENST00000626274 TWISTNBQ3B726 338 aaPredicted RBP25.81■■□□□ 1.72
PNKP-219ENST00000626274 PRR5LQ6MZQ0 368 aa25.81■■□□□ 1.72
PNKP-219ENST00000626274 CNBD1Q8NA66 436 aa25.81■■□□□ 1.72
PNKP-219ENST00000626274 SPINK5Q9NQ38 1064 aaPredicted RBP25.81■■□□□ 1.72
PNKP-219ENST00000626274 BRCA1P38398 1863 aaKnown RBP25.81■■□□□ 1.72
PNKP-219ENST00000626274 NBPF5PQ86XG9 351 aaPredicted RBP25.8■■□□□ 1.72
PNKP-219ENST00000626274 ANKRD31Q8N7Z5 1873 aa25.8■■□□□ 1.72
PNKP-219ENST00000626274 YBX3P16989 372 aaKnown RBP eCLIP25.79■■□□□ 1.72
PNKP-219ENST00000626274 TPTE2Q6XPS3 522 aa25.78■■□□□ 1.72
PNKP-219ENST00000626274 WWC3Q9ULE0 1092 aa25.78■■□□□ 1.72
PNKP-219ENST00000626274 ANKRD36CQ5JPF3 1778 aa25.77■■□□□ 1.72
PNKP-219ENST00000626274 CACNA1FO60840 1977 aa25.77■■□□□ 1.72
PNKP-219ENST00000626274 GRIN3BO60391 1043 aa25.77■■□□□ 1.72
PNKP-219ENST00000626274 ST5P78524 1137 aa25.77■■□□□ 1.72
PNKP-219ENST00000626274 EXOSC9Q06265 439 aaKnown RBP25.77■■□□□ 1.72
PNKP-219ENST00000626274 BRIP1Q9BX63 1249 aa25.77■■□□□ 1.72
PNKP-219ENST00000626274 CHD4Q14839 1912 aa25.76■■□□□ 1.72
PNKP-219ENST00000626274 KCNA3P22001 575 aa25.76■■□□□ 1.71
PNKP-219ENST00000626274 GPTP24298 496 aa25.76■■□□□ 1.71
PNKP-219ENST00000626274 CHRNA5P30532 468 aa25.76■■□□□ 1.71
PNKP-219ENST00000626274 HSP90AB3PQ58FF7 597 aa25.76■■□□□ 1.71
PNKP-219ENST00000626274 ZNF34Q8IZ26 560 aa25.76■■□□□ 1.71
PNKP-219ENST00000626274 CCDC24Q8N4L8 307 aa25.76■■□□□ 1.71
PNKP-219ENST00000626274 PLBD2Q8NHP8 589 aa25.76■■□□□ 1.71
PNKP-219ENST00000626274 DLEC1Q9Y238 1755 aa25.75■■□□□ 1.71
PNKP-219ENST00000626274 FAM177BA6PVY3 158 aa25.75■■□□□ 1.71
PNKP-219ENST00000626274 ANKRD13DQ6ZTN6 518 aa25.75■■□□□ 1.71
PNKP-219ENST00000626274 STK31Q9BXU1 1019 aa25.75■■□□□ 1.71
PNKP-219ENST00000626274 PIM2Q9P1W9 311 aa25.75■■□□□ 1.71
PNKP-219ENST00000626274 PDE6BP35913 854 aa25.74■■□□□ 1.71
PNKP-219ENST00000626274 NYXQ9GZU5 481 aa25.74■■□□□ 1.71
PNKP-219ENST00000626274 PHAXQ9H814 394 aaKnown RBP25.74■■□□□ 1.71
PNKP-219ENST00000626274 PDZRN3Q9UPQ7 1066 aa25.74■■□□□ 1.71
PNKP-219ENST00000626274 UBN2Q6ZU65 1347 aa25.73■■□□□ 1.71
PNKP-219ENST00000626274 H0YIN7 160 aa25.73■■□□□ 1.71
PNKP-219ENST00000626274 VAMP4O75379 141 aa25.73■■□□□ 1.71
PNKP-219ENST00000626274 GTF2E1P29083 439 aaPredicted RBP25.73■■□□□ 1.71
PNKP-219ENST00000626274 PARP10Q53GL7 1025 aa25.73■■□□□ 1.71
PNKP-219ENST00000626274 C2CD5Q86YS7 1000 aa25.73■■□□□ 1.71
PNKP-219ENST00000626274 BCS1LQ9Y276 419 aa25.73■■□□□ 1.71
PNKP-219ENST00000626274 ARFGEF2Q9Y6D5 1785 aa25.72■■□□□ 1.71
PNKP-219ENST00000626274 IBTKQ9P2D0 1353 aaPredicted RBP25.72■■□□□ 1.71
PNKP-219ENST00000626274 E9PSI1 815 aa25.72■■□□□ 1.71
PNKP-219ENST00000626274 TCIRG1Q13488 830 aa25.72■■□□□ 1.71
PNKP-219ENST00000626274 ARFGEF1Q9Y6D6 1849 aa25.72■■□□□ 1.71
PNKP-219ENST00000626274 TCERG1O14776 1098 aaKnown RBP25.71■■□□□ 1.71
PNKP-219ENST00000626274 SUSD4Q5VX71 490 aa25.71■■□□□ 1.71
PNKP-219ENST00000626274 PPP1R42Q7Z4L9 355 aa25.7■■□□□ 1.7
PNKP-219ENST00000626274 COL11A2P13942 1736 aaPredicted RBP25.69■■□□□ 1.7
PNKP-219ENST00000626274 DALRD3Q5D0E6 543 aaKnown RBP25.69■■□□□ 1.7
PNKP-219ENST00000626274 RIC3Q7Z5B4 369 aa25.69■■□□□ 1.7
PNKP-219ENST00000626274 DDX58O95786 925 aaKnown RBP25.68■■□□□ 1.7
PNKP-219ENST00000626274 SLC4A2P04920 1241 aa25.68■■□□□ 1.7
PNKP-219ENST00000626274 SLFN5Q08AF3 891 aa25.68■■□□□ 1.7
PNKP-219ENST00000626274 NTSR2O95665 410 aa25.67■■□□□ 1.7
PNKP-219ENST00000626274 NLRP10Q86W26 655 aa25.67■■□□□ 1.7
PNKP-219ENST00000626274 NUTM1Q86Y26 1132 aa25.67■■□□□ 1.7
PNKP-219ENST00000626274 UTP14AQ9BVJ6 771 aaKnown RBP25.67■■□□□ 1.7
PNKP-219ENST00000626274 ERFEQ4G0M1 354 aa25.66■■□□□ 1.7
PNKP-219ENST00000626274 SRGNP10124 158 aa25.65■■□□□ 1.7
PNKP-219ENST00000626274 TTLL6Q8N841 843 aa25.65■■□□□ 1.7
PNKP-219ENST00000626274 ZNF622Q969S3 477 aaKnown RBP eCLIP25.65■■□□□ 1.7
PNKP-219ENST00000626274 CDCA7LQ96GN5 454 aa25.65■■□□□ 1.7
PNKP-219ENST00000626274 ISCA1Q9BUE6 129 aa25.65■■□□□ 1.7
PNKP-219ENST00000626274 ABCC12Q96J65 1359 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms