RNA–Protein interactions for RNA: ENST00000625849.2

TCF4-250, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-250ENST00000625849 TXLNAP40222 546 aa9.4□□□□□ -0.9
TCF4-250ENST00000625849 PLPP7Q8NBV4 271 aa9.4□□□□□ -0.9
TCF4-250ENST00000625849 PRM3Q9NNZ6 103 aa9.4□□□□□ -0.9
TCF4-250ENST00000625849 C9orf172C9J069 976 aa9.39□□□□□ -0.91
TCF4-250ENST00000625849 NID1P14543 1247 aa9.39□□□□□ -0.91
TCF4-250ENST00000625849 C8orf86Q6ZUL3 223 aa9.39□□□□□ -0.91
TCF4-250ENST00000625849 IRF5Q13568 498 aa9.38□□□□□ -0.91
TCF4-250ENST00000625849 NEUROD2Q15784 382 aa9.38□□□□□ -0.91
TCF4-250ENST00000625849 LRRC69Q6ZNQ3 347 aa9.38□□□□□ -0.91
TCF4-250ENST00000625849 ADH7P40394 386 aa9.37□□□□□ -0.91
TCF4-250ENST00000625849 SLC30A3Q99726 388 aa9.37□□□□□ -0.91
TCF4-250ENST00000625849 BTBD11A6QL63 1104 aa9.36□□□□□ -0.91
TCF4-250ENST00000625849 NEUROD1Q13562 356 aa9.36□□□□□ -0.91
TCF4-250ENST00000625849 ADGRE1Q14246 886 aa9.36□□□□□ -0.91
TCF4-250ENST00000625849 NEUROD4Q9HD90 331 aa9.36□□□□□ -0.91
TCF4-250ENST00000625849 BACH1O14867 736 aa9.35□□□□□ -0.91
TCF4-250ENST00000625849 VAC14Q08AM6 782 aa9.35□□□□□ -0.91
TCF4-250ENST00000625849 SFSWAPQ12872 951 aaKnown RBP9.35□□□□□ -0.91
TCF4-250ENST00000625849 MBTPS1Q14703 1052 aa9.35□□□□□ -0.91
TCF4-250ENST00000625849 TRAPPC3LQ5T215 181 aa9.35□□□□□ -0.91
TCF4-250ENST00000625849 ZDHHC1Q8WTX9 485 aa9.35□□□□□ -0.91
TCF4-250ENST00000625849 GPC6Q9Y625 555 aaPredicted RBP9.35□□□□□ -0.91
TCF4-250ENST00000625849 HYAL3O43820 417 aaPredicted RBP9.34□□□□□ -0.91
TCF4-250ENST00000625849 C20orf204Q6ZNR8 217 aa9.34□□□□□ -0.91
TCF4-250ENST00000625849 TXNRD3Q86VQ6 643 aa9.34□□□□□ -0.91
TCF4-250ENST00000625849 L3MBTL2Q969R5 705 aa9.34□□□□□ -0.91
TCF4-250ENST00000625849 SCHIP1Q9P0W5 487 aaPredicted RBP9.34□□□□□ -0.91
TCF4-250ENST00000625849 EML1O00423 815 aa9.33□□□□□ -0.92
TCF4-250ENST00000625849 SELPP16109 830 aa9.33□□□□□ -0.92
TCF4-250ENST00000625849 SPEM2Q0P670 501 aa9.33□□□□□ -0.92
TCF4-250ENST00000625849 TEAD4Q15561 434 aa9.33□□□□□ -0.92
TCF4-250ENST00000625849 LILRB5O75023 590 aa9.32□□□□□ -0.92
TCF4-250ENST00000625849 ELNP15502 786 aa9.32□□□□□ -0.92
TCF4-250ENST00000625849 NOS2P35228 1153 aa9.32□□□□□ -0.92
TCF4-250ENST00000625849 PCDHGA11Q9Y5H2 935 aa9.32□□□□□ -0.92
TCF4-250ENST00000625849 A0A0A0MRY4 1105 aa9.31□□□□□ -0.92
TCF4-250ENST00000625849 NRG1Q02297 640 aaPredicted RBP9.31□□□□□ -0.92
TCF4-250ENST00000625849 RAB44Q7Z6P3 723 aaPredicted RBP9.31□□□□□ -0.92
TCF4-250ENST00000625849 LENG1Q96BZ8 264 aaPredicted RBP9.31□□□□□ -0.92
TCF4-250ENST00000625849 KRTAP9-9Q9BYP9 154 aa9.31□□□□□ -0.92
TCF4-250ENST00000625849 KRTAP9-4Q9BYQ2 154 aa9.31□□□□□ -0.92
TCF4-250ENST00000625849 KRTAP19-1Q8IUB9 90 aa9.3□□□□□ -0.92
TCF4-250ENST00000625849 TP53INP1Q96A56 240 aa9.3□□□□□ -0.92
TCF4-250ENST00000625849 GOLGA2P5Q9HBQ8 144 aa9.3□□□□□ -0.92
TCF4-250ENST00000625849 ZNF232Q9UNY5 417 aa9.3□□□□□ -0.92
TCF4-250ENST00000625849 RAC1P63000 192 aa9.29□□□□□ -0.92
TCF4-250ENST00000625849 SEMA3FQ13275 785 aa9.29□□□□□ -0.92
TCF4-250ENST00000625849 RHPN1Q8TCX5 695 aa9.29□□□□□ -0.92
TCF4-250ENST00000625849 C7orf43Q8WVR3 580 aa9.29□□□□□ -0.92
TCF4-250ENST00000625849 ZNF358Q9NW07 568 aa9.29□□□□□ -0.92
TCF4-250ENST00000625849 EML3Q32P44 896 aa9.28□□□□□ -0.92
TCF4-250ENST00000625849 SLC9A9Q8IVB4 645 aa9.28□□□□□ -0.92
TCF4-250ENST00000625849 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.28□□□□□ -0.92
TCF4-250ENST00000625849 BRD7Q9NPI1 651 aa9.28□□□□□ -0.92
TCF4-250ENST00000625849 WASHC4Q2M389 1173 aa9.27□□□□□ -0.93
TCF4-250ENST00000625849 SERTM1A2A2V5 107 aa9.26□□□□□ -0.93
TCF4-250ENST00000625849 SOX11P35716 441 aa9.26□□□□□ -0.93
TCF4-250ENST00000625849 GTF2IP78347 998 aa9.26□□□□□ -0.93
TCF4-250ENST00000625849 PSME1Q06323 249 aa9.26□□□□□ -0.93
TCF4-250ENST00000625849 SHISA2Q6UWI4 295 aa9.26□□□□□ -0.93
TCF4-250ENST00000625849 CEP63Q96MT8 703 aa9.26□□□□□ -0.93
TCF4-250ENST00000625849 NOD1Q9Y239 953 aa9.26□□□□□ -0.93
TCF4-250ENST00000625849 EPHA4P54764 986 aa9.25□□□□□ -0.93
TCF4-250ENST00000625849 KCNQ4P56696 695 aa9.25□□□□□ -0.93
TCF4-250ENST00000625849 TBCELQ5QJ74 424 aa9.25□□□□□ -0.93
TCF4-250ENST00000625849 SSBP4Q9BWG4 385 aaPredicted RBP9.25□□□□□ -0.93
TCF4-250ENST00000625849 JPH1Q9HDC5 661 aaPredicted RBP9.25□□□□□ -0.93
TCF4-250ENST00000625849 USP21Q9UK80 565 aa9.25□□□□□ -0.93
TCF4-250ENST00000625849 KCNH4Q9UQ05 1017 aa9.25□□□□□ -0.93
TCF4-250ENST00000625849 PIK3CDO00329 1044 aa9.24□□□□□ -0.93
TCF4-250ENST00000625849 BHMTQ93088 406 aa9.24□□□□□ -0.93
TCF4-250ENST00000625849 UBE2OQ9C0C9 1292 aaKnown RBP9.24□□□□□ -0.93
TCF4-250ENST00000625849 GDPD2Q9HCC8 539 aa9.24□□□□□ -0.93
TCF4-250ENST00000625849 ANKIB1Q9P2G1 1089 aa9.24□□□□□ -0.93
TCF4-250ENST00000625849 ABL2P42684 1182 aa9.23□□□□□ -0.93
TCF4-250ENST00000625849 TBC1D8BQ0IIM8 1120 aa9.23□□□□□ -0.93
TCF4-250ENST00000625849 SH3PXD2AQ5TCZ1 1133 aa9.23□□□□□ -0.93
TCF4-250ENST00000625849 LZTS3O60299 673 aaPredicted RBP9.22□□□□□ -0.93
TCF4-250ENST00000625849 TYRO3Q06418 890 aa9.22□□□□□ -0.93
TCF4-250ENST00000625849 C1orf53Q5VUE5 145 aa9.22□□□□□ -0.93
TCF4-250ENST00000625849 TNS4Q8IZW8 715 aa9.22□□□□□ -0.93
TCF4-250ENST00000625849 FMR1NBQ8N0W7 255 aaPredicted RBP9.22□□□□□ -0.93
TCF4-250ENST00000625849 NUDT8Q8WV74 236 aa9.22□□□□□ -0.93
TCF4-250ENST00000625849 HSH2DQ96JZ2 352 aa9.22□□□□□ -0.93
TCF4-250ENST00000625849 SLC6A14Q9UN76 642 aa9.22□□□□□ -0.93
TCF4-250ENST00000625849 SFI1A8K8P3 1242 aa9.21□□□□□ -0.94
TCF4-250ENST00000625849 SKIP12755 728 aa9.21□□□□□ -0.94
TCF4-250ENST00000625849 MCTP1Q6DN14 999 aa9.21□□□□□ -0.94
TCF4-250ENST00000625849 RNF112Q9ULX5 631 aa9.21□□□□□ -0.94
TCF4-250ENST00000625849 KRTAP4-8A0A0G2JLE6 195 aa9.19□□□□□ -0.94
TCF4-250ENST00000625849 AFF1P51825 1210 aaKnown RBP9.19□□□□□ -0.94
TCF4-250ENST00000625849 BRPF1P55201 1214 aaPredicted RBP9.19□□□□□ -0.94
TCF4-250ENST00000625849 PSMA6P60900 246 aaKnown RBP9.19□□□□□ -0.94
TCF4-250ENST00000625849 DMRTC2Q8IXT2 367 aaPredicted RBP9.19□□□□□ -0.94
TCF4-250ENST00000625849 IGFLR1Q9H665 355 aa9.19□□□□□ -0.94
TCF4-250ENST00000625849 CHMP3Q9Y3E7 222 aa9.19□□□□□ -0.94
TCF4-250ENST00000625849 NCOA4Q13772 614 aa9.18□□□□□ -0.94
TCF4-250ENST00000625849 PHACTR1Q9C0D0 580 aa9.18□□□□□ -0.94
TCF4-250ENST00000625849 HCN4Q9Y3Q4 1203 aa9.18□□□□□ -0.94
TCF4-250ENST00000625849 HIRAP54198 1017 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms