RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 USP3Q9Y6I4 520 aa6.45□□□□□ -1.38
CHD2-203ENST00000625243 A6NJY4 79 aa6.44□□□□□ -1.38
CHD2-203ENST00000625243 SOCS7O14512 581 aa6.44□□□□□ -1.38
CHD2-203ENST00000625243 SELPP16109 830 aa6.44□□□□□ -1.38
CHD2-203ENST00000625243 ADH7P40394 386 aa6.44□□□□□ -1.38
CHD2-203ENST00000625243 EIF4G2P78344 907 aaKnown RBP eCLIP6.44□□□□□ -1.38
CHD2-203ENST00000625243 TNFRSF25Q93038 417 aa6.44□□□□□ -1.38
CHD2-203ENST00000625243 TP53INP1Q96A56 240 aa6.44□□□□□ -1.38
CHD2-203ENST00000625243 SLC4A9Q96Q91 983 aa6.44□□□□□ -1.38
CHD2-203ENST00000625243 APBB1O00213 710 aa6.43□□□□□ -1.38
CHD2-203ENST00000625243 ELNP15502 786 aa6.43□□□□□ -1.38
CHD2-203ENST00000625243 SFSWAPQ12872 951 aaKnown RBP6.43□□□□□ -1.38
CHD2-203ENST00000625243 MCTP1Q6DN14 999 aa6.43□□□□□ -1.38
CHD2-203ENST00000625243 LRRC69Q6ZNQ3 347 aa6.43□□□□□ -1.38
CHD2-203ENST00000625243 SLC30A3Q99726 388 aa6.43□□□□□ -1.38
CHD2-203ENST00000625243 CHIC2Q9UKJ5 165 aa6.43□□□□□ -1.38
CHD2-203ENST00000625243 TXLNAP40222 546 aa6.42□□□□□ -1.38
CHD2-203ENST00000625243 NRG1Q02297 640 aaPredicted RBP6.42□□□□□ -1.38
CHD2-203ENST00000625243 MTFR1Q15390 333 aa6.42□□□□□ -1.38
CHD2-203ENST00000625243 C20orf204Q6ZNR8 217 aa6.42□□□□□ -1.38
CHD2-203ENST00000625243 LENG1Q96BZ8 264 aaPredicted RBP6.42□□□□□ -1.38
CHD2-203ENST00000625243 NEUROD4Q9HD90 331 aa6.42□□□□□ -1.38
CHD2-203ENST00000625243 SNRKQ9NRH2 765 aa6.42□□□□□ -1.38
CHD2-203ENST00000625243 A0A0A0MRY4 1105 aa6.41□□□□□ -1.38
CHD2-203ENST00000625243 TMEM229AB2RXF0 380 aa6.41□□□□□ -1.38
CHD2-203ENST00000625243 LILRB5O75023 590 aa6.41□□□□□ -1.38
CHD2-203ENST00000625243 NEUROD1Q13562 356 aa6.41□□□□□ -1.38
CHD2-203ENST00000625243 SHISA2Q6UWI4 295 aa6.41□□□□□ -1.38
CHD2-203ENST00000625243 RAC1P63000 192 aa6.4□□□□□ -1.38
CHD2-203ENST00000625243 SPEM2Q0P670 501 aa6.4□□□□□ -1.38
CHD2-203ENST00000625243 RAB44Q7Z6P3 723 aaPredicted RBP6.4□□□□□ -1.38
CHD2-203ENST00000625243 MAP7D1Q3KQU3 841 aa6.39□□□□□ -1.39
CHD2-203ENST00000625243 USP21Q9UK80 565 aa6.39□□□□□ -1.39
CHD2-203ENST00000625243 PAX4O43316 350 aa6.38□□□□□ -1.39
CHD2-203ENST00000625243 COBLO75128 1261 aa6.38□□□□□ -1.39
CHD2-203ENST00000625243 TXKP42681 527 aa6.38□□□□□ -1.39
CHD2-203ENST00000625243 PLPP7Q8NBV4 271 aa6.38□□□□□ -1.39
CHD2-203ENST00000625243 IL27Q8NEV9 243 aa6.38□□□□□ -1.39
CHD2-203ENST00000625243 ZDHHC1Q8WTX9 485 aa6.38□□□□□ -1.39
CHD2-203ENST00000625243 L3MBTL2Q969R5 705 aa6.38□□□□□ -1.39
CHD2-203ENST00000625243 SSBP4Q9BWG4 385 aaPredicted RBP6.38□□□□□ -1.39
CHD2-203ENST00000625243 RNF112Q9ULX5 631 aa6.38□□□□□ -1.39
CHD2-203ENST00000625243 EML1O00423 815 aa6.37□□□□□ -1.39
CHD2-203ENST00000625243 COL17A1Q9UMD9 1497 aaPredicted RBP6.36□□□□□ -1.39
CHD2-203ENST00000625243 BACH1O14867 736 aa6.36□□□□□ -1.39
CHD2-203ENST00000625243 NOS2P35228 1153 aa6.36□□□□□ -1.39
CHD2-203ENST00000625243 TEAD4Q15561 434 aa6.36□□□□□ -1.39
CHD2-203ENST00000625243 SCHIP1Q9P0W5 487 aaPredicted RBP6.36□□□□□ -1.39
CHD2-203ENST00000625243 ZNF232Q9UNY5 417 aa6.36□□□□□ -1.39
CHD2-203ENST00000625243 TBC1D2BQ9UPU7 963 aa6.36□□□□□ -1.39
CHD2-203ENST00000625243 TBC1D8BQ0IIM8 1120 aa6.35□□□□□ -1.39
CHD2-203ENST00000625243 NUDT8Q8WV74 236 aa6.35□□□□□ -1.39
CHD2-203ENST00000625243 C7orf43Q8WVR3 580 aa6.35□□□□□ -1.39
CHD2-203ENST00000625243 CEP63Q96MT8 703 aa6.35□□□□□ -1.39
CHD2-203ENST00000625243 JPH1Q9HDC5 661 aaPredicted RBP6.35□□□□□ -1.39
CHD2-203ENST00000625243 GPC6Q9Y625 555 aaPredicted RBP6.35□□□□□ -1.39
CHD2-203ENST00000625243 IRF5Q13568 498 aa6.34□□□□□ -1.39
CHD2-203ENST00000625243 FMR1NBQ8N0W7 255 aaPredicted RBP6.34□□□□□ -1.39
CHD2-203ENST00000625243 BHMTQ93088 406 aa6.34□□□□□ -1.39
CHD2-203ENST00000625243 IGFLR1Q9H665 355 aa6.34□□□□□ -1.39
CHD2-203ENST00000625243 BRD7Q9NPI1 651 aa6.34□□□□□ -1.39
CHD2-203ENST00000625243 PCMTD2Q9NV79 361 aa6.34□□□□□ -1.39
CHD2-203ENST00000625243 PCDHGA11Q9Y5H2 935 aa6.34□□□□□ -1.39
CHD2-203ENST00000625243 YBX3P16989 372 aaKnown RBP eCLIP6.33□□□□□ -1.4
CHD2-203ENST00000625243 VAC14Q08AM6 782 aa6.33□□□□□ -1.4
CHD2-203ENST00000625243 DMRTC2Q8IXT2 367 aaPredicted RBP6.33□□□□□ -1.4
CHD2-203ENST00000625243 RHPN1Q8TCX5 695 aa6.33□□□□□ -1.4
CHD2-203ENST00000625243 WFDC12Q8WWY7 111 aa6.33□□□□□ -1.4
CHD2-203ENST00000625243 UBE2OQ9C0C9 1292 aaKnown RBP6.33□□□□□ -1.4
CHD2-203ENST00000625243 PRM3Q9NNZ6 103 aa6.33□□□□□ -1.4
CHD2-203ENST00000625243 KCNH4Q9UQ05 1017 aa6.33□□□□□ -1.4
CHD2-203ENST00000625243 IREB2P48200 963 aaKnown RBP6.32□□□□□ -1.4
CHD2-203ENST00000625243 AFF1P51825 1210 aaKnown RBP6.32□□□□□ -1.4
CHD2-203ENST00000625243 KCNQ4P56696 695 aa6.32□□□□□ -1.4
CHD2-203ENST00000625243 TBCELQ5QJ74 424 aa6.32□□□□□ -1.4
CHD2-203ENST00000625243 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.32□□□□□ -1.4
CHD2-203ENST00000625243 FMNL2Q96PY5 1086 aa6.32□□□□□ -1.4
CHD2-203ENST00000625243 SLC6A14Q9UN76 642 aa6.32□□□□□ -1.4
CHD2-203ENST00000625243 SERTM1A2A2V5 107 aa6.31□□□□□ -1.4
CHD2-203ENST00000625243 SFI1A8K8P3 1242 aa6.31□□□□□ -1.4
CHD2-203ENST00000625243 SLC9A9Q8IVB4 645 aa6.31□□□□□ -1.4
CHD2-203ENST00000625243 ZNF358Q9NW07 568 aa6.31□□□□□ -1.4
CHD2-203ENST00000625243 ANKIB1Q9P2G1 1089 aa6.31□□□□□ -1.4
CHD2-203ENST00000625243 SSTR4P31391 388 aa6.3□□□□□ -1.4
CHD2-203ENST00000625243 PSME1Q06323 249 aa6.3□□□□□ -1.4
CHD2-203ENST00000625243 SH3PXD2AQ5TCZ1 1133 aa6.3□□□□□ -1.4
CHD2-203ENST00000625243 PSAPL1Q6NUJ1 521 aa6.3□□□□□ -1.4
CHD2-203ENST00000625243 HSH2DQ96JZ2 352 aa6.3□□□□□ -1.4
CHD2-203ENST00000625243 KRTAP4-7Q9BYR0 210 aa6.3□□□□□ -1.4
CHD2-203ENST00000625243 RGS9O75916 674 aaPredicted RBP6.29□□□□□ -1.4
CHD2-203ENST00000625243 NOS3P29474 1203 aa6.29□□□□□ -1.4
CHD2-203ENST00000625243 IRAK1P51617 712 aa6.29□□□□□ -1.4
CHD2-203ENST00000625243 SEMA3FQ13275 785 aa6.29□□□□□ -1.4
CHD2-203ENST00000625243 LCE1DQ5T752 114 aa6.29□□□□□ -1.4
CHD2-203ENST00000625243 TNS4Q8IZW8 715 aa6.29□□□□□ -1.4
CHD2-203ENST00000625243 EPHA4P54764 986 aa6.28□□□□□ -1.4
CHD2-203ENST00000625243 GTF2IP78347 998 aa6.28□□□□□ -1.4
CHD2-203ENST00000625243 TYRO3Q06418 890 aa6.28□□□□□ -1.4
CHD2-203ENST00000625243 EML3Q32P44 896 aa6.28□□□□□ -1.4
CHD2-203ENST00000625243 PRR23CQ6ZRP0 262 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms