RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 ZBTB1Q9Y2K1 713 aa12.45□□□□□ -0.42
LINC01560-202ENST00000624822 COL24A1Q17RW2 1714 aa12.45□□□□□ -0.42
LINC01560-202ENST00000624822 RFC4P35249 363 aa12.44□□□□□ -0.42
LINC01560-202ENST00000624822 GNAI1P63096 354 aa12.44□□□□□ -0.42
LINC01560-202ENST00000624822 MSL1Q68DK7 614 aa12.44□□□□□ -0.42
LINC01560-202ENST00000624822 SLC16A10Q8TF71 515 aa12.44□□□□□ -0.42
LINC01560-202ENST00000624822 CFAP44Q96MT7 982 aa12.44□□□□□ -0.42
LINC01560-202ENST00000624822 SGIP1Q9BQI5 828 aa12.44□□□□□ -0.42
LINC01560-202ENST00000624822 BABAM1Q9NWV8 329 aa12.44□□□□□ -0.42
LINC01560-202ENST00000624822 PPP1R1BQ9UD71 204 aaPredicted RBP12.44□□□□□ -0.42
LINC01560-202ENST00000624822 USP16Q9Y5T5 823 aa12.44□□□□□ -0.42
LINC01560-202ENST00000624822 COL15A1P39059 1388 aa12.43□□□□□ -0.42
LINC01560-202ENST00000624822 CCDC27Q2M243 656 aa12.43□□□□□ -0.42
LINC01560-202ENST00000624822 INTS5Q6P9B9 1019 aaKnown RBP12.43□□□□□ -0.42
LINC01560-202ENST00000624822 WWC1Q8IX03 1113 aa12.43□□□□□ -0.42
LINC01560-202ENST00000624822 ARXQ96QS3 562 aa12.43□□□□□ -0.42
LINC01560-202ENST00000624822 IFT57Q9NWB7 429 aa12.43□□□□□ -0.42
LINC01560-202ENST00000624822 BCORQ6W2J9 1755 aa12.43□□□□□ -0.42
LINC01560-202ENST00000624822 CHL1O00533 1208 aa12.42□□□□□ -0.42
LINC01560-202ENST00000624822 A1BGP04217 495 aa12.42□□□□□ -0.42
LINC01560-202ENST00000624822 POLD1P28340 1107 aa12.42□□□□□ -0.42
LINC01560-202ENST00000624822 PIP4K2AP48426 406 aaPredicted RBP12.42□□□□□ -0.42
LINC01560-202ENST00000624822 ARHGEF1Q92888 912 aaKnown RBP12.42□□□□□ -0.42
LINC01560-202ENST00000624822 MBIPQ9NS73 344 aa12.42□□□□□ -0.42
LINC01560-202ENST00000624822 SCN7AQ01118 1682 aa12.42□□□□□ -0.42
LINC01560-202ENST00000624822 SOS1Q07889 1333 aaPredicted RBP12.41□□□□□ -0.42
LINC01560-202ENST00000624822 ZPR1O75312 459 aa12.41□□□□□ -0.42
LINC01560-202ENST00000624822 GIGYF1O75420 1035 aaPredicted RBP12.41□□□□□ -0.42
LINC01560-202ENST00000624822 EIF2S2P20042 333 aaKnown RBP12.41□□□□□ -0.42
LINC01560-202ENST00000624822 MAMSTRQ6ZN01 415 aa12.41□□□□□ -0.42
LINC01560-202ENST00000624822 KLHL34Q8N239 644 aa12.4□□□□□ -0.42
LINC01560-202ENST00000624822 NECTIN2Q92692 538 aa12.4□□□□□ -0.42
LINC01560-202ENST00000624822 SRP68Q9UHB9 627 aaKnown RBP12.4□□□□□ -0.42
LINC01560-202ENST00000624822 FBXO3Q9UK99 471 aa12.4□□□□□ -0.42
LINC01560-202ENST00000624822 A0A087WZG4 1122 aa12.39□□□□□ -0.43
LINC01560-202ENST00000624822 POTEMA6NI47 508 aa12.39□□□□□ -0.43
LINC01560-202ENST00000624822 ZNF853P0CG23 659 aa12.39□□□□□ -0.43
LINC01560-202ENST00000624822 PYGBP11216 843 aa12.39□□□□□ -0.43
LINC01560-202ENST00000624822 IL6STP40189 918 aaPredicted RBP12.39□□□□□ -0.43
LINC01560-202ENST00000624822 KRT24Q2M2I5 525 aa12.39□□□□□ -0.43
LINC01560-202ENST00000624822 DCAF8Q5TAQ9 597 aa12.39□□□□□ -0.43
LINC01560-202ENST00000624822 NGEFQ8N5V2 710 aa12.39□□□□□ -0.43
LINC01560-202ENST00000624822 TSR2Q969E8 191 aaKnown RBP12.39□□□□□ -0.43
LINC01560-202ENST00000624822 PLSCR2Q9NRY7 297 aa12.39□□□□□ -0.43
LINC01560-202ENST00000624822 NUP98P52948 1817 aa12.39□□□□□ -0.43
LINC01560-202ENST00000624822 USP42Q9H9J4 1324 aaKnown RBP12.38□□□□□ -0.43
LINC01560-202ENST00000624822 ELL2O00472 640 aaPredicted RBP12.38□□□□□ -0.43
LINC01560-202ENST00000624822 SEC24BO95487 1268 aa12.38□□□□□ -0.43
LINC01560-202ENST00000624822 MYL6BP14649 208 aa12.38□□□□□ -0.43
LINC01560-202ENST00000624822 PTGER2P43116 358 aa12.38□□□□□ -0.43
LINC01560-202ENST00000624822 USPL1Q5W0Q7 1092 aa12.38□□□□□ -0.43
LINC01560-202ENST00000624822 WDR63Q8IWG1 891 aa12.38□□□□□ -0.43
LINC01560-202ENST00000624822 SCUBE2Q9NQ36 999 aa12.38□□□□□ -0.43
LINC01560-202ENST00000624822 AFDNP55196 1824 aaKnown RBP12.38□□□□□ -0.43
LINC01560-202ENST00000624822 IL16Q14005 1332 aa12.37□□□□□ -0.43
LINC01560-202ENST00000624822 GYS1P13807 737 aa12.37□□□□□ -0.43
LINC01560-202ENST00000624822 EIF5P55010 431 aaKnown RBP12.37□□□□□ -0.43
LINC01560-202ENST00000624822 DZIP3Q86Y13 1208 aaKnown RBP12.37□□□□□ -0.43
LINC01560-202ENST00000624822 TMEM106CQ9BVX2 250 aa12.37□□□□□ -0.43
LINC01560-202ENST00000624822 NARFQ9UHQ1 456 aa12.37□□□□□ -0.43
LINC01560-202ENST00000624822 TBC1D2BQ9UPU7 963 aa12.37□□□□□ -0.43
LINC01560-202ENST00000624822 NBPF26B4DH59 902 aa12.36□□□□□ -0.43
LINC01560-202ENST00000624822 HDGFL1Q5TGJ6 251 aa12.36□□□□□ -0.43
LINC01560-202ENST00000624822 DUSP27Q5VZP5 1158 aa12.36□□□□□ -0.43
LINC01560-202ENST00000624822 NBPF10Q6P3W6 841 aaKnown RBP12.36□□□□□ -0.43
LINC01560-202ENST00000624822 POTEGQ6S5H5 508 aa12.36□□□□□ -0.43
LINC01560-202ENST00000624822 NLGN1Q8N2Q7 840 aa12.36□□□□□ -0.43
LINC01560-202ENST00000624822 NBPF15Q8N660 670 aa12.36□□□□□ -0.43
LINC01560-202ENST00000624822 ANKRD36CQ5JPF3 1778 aa12.35□□□□□ -0.43
LINC01560-202ENST00000624822 HOXB7P09629 217 aa12.35□□□□□ -0.43
LINC01560-202ENST00000624822 MYH16Q9H6N6 1097 aa12.35□□□□□ -0.43
LINC01560-202ENST00000624822 PARP3Q9Y6F1 533 aa12.35□□□□□ -0.43
LINC01560-202ENST00000624822 CACNA1FO60840 1977 aa12.35□□□□□ -0.43
LINC01560-202ENST00000624822 ERBB4Q15303 1308 aa12.35□□□□□ -0.43
LINC01560-202ENST00000624822 FANCIQ9NVI1 1328 aa12.35□□□□□ -0.43
LINC01560-202ENST00000624822 ANXA1P04083 346 aa12.34□□□□□ -0.43
LINC01560-202ENST00000624822 MMP10P09238 476 aa12.34□□□□□ -0.43
LINC01560-202ENST00000624822 GOLGA2Q08379 1002 aa12.34□□□□□ -0.43
LINC01560-202ENST00000624822 LCE2DQ5TA82 110 aaPredicted RBP12.34□□□□□ -0.43
LINC01560-202ENST00000624822 KIF6Q6ZMV9 814 aa12.34□□□□□ -0.43
LINC01560-202ENST00000624822 BICDL1Q6ZP65 573 aa12.34□□□□□ -0.43
LINC01560-202ENST00000624822 C8orf58Q8NAV2 365 aa12.34□□□□□ -0.43
LINC01560-202ENST00000624822 N4BP2Q86UW6 1770 aaPredicted RBP12.33□□□□□ -0.44
LINC01560-202ENST00000624822 KIF13BQ9NQT8 1826 aa12.33□□□□□ -0.44
LINC01560-202ENST00000624822 HNRNPUQ00839 825 aaKnown RBP eCLIP12.33□□□□□ -0.44
LINC01560-202ENST00000624822 AIMP1Q12904 312 aaKnown RBP12.33□□□□□ -0.44
LINC01560-202ENST00000624822 TWISTNBQ3B726 338 aaPredicted RBP12.33□□□□□ -0.44
LINC01560-202ENST00000624822 FHDC1Q9C0D6 1143 aaPredicted RBP12.33□□□□□ -0.44
LINC01560-202ENST00000624822 CHPF2Q9P2E5 772 aa12.33□□□□□ -0.44
LINC01560-202ENST00000624822 ZNF652Q9Y2D9 606 aa12.33□□□□□ -0.44
LINC01560-202ENST00000624822 ARFGEF2Q9Y6D5 1785 aa12.33□□□□□ -0.44
LINC01560-202ENST00000624822 CAMTA2O94983 1202 aa12.32□□□□□ -0.44
LINC01560-202ENST00000624822 VASPP50552 380 aaPredicted RBP12.32□□□□□ -0.44
LINC01560-202ENST00000624822 PROSER3Q2NL68 480 aa12.32□□□□□ -0.44
LINC01560-202ENST00000624822 TSPYL6Q8N831 410 aa12.32□□□□□ -0.44
LINC01560-202ENST00000624822 DBF4Q9UBU7 674 aaPredicted RBP12.32□□□□□ -0.44
LINC01560-202ENST00000624822 ZNF521Q96K83 1311 aa12.32□□□□□ -0.44
LINC01560-202ENST00000624822 NRXN2Q9P2S2 1712 aa12.31□□□□□ -0.44
LINC01560-202ENST00000624822 NPHP1O15259 732 aa12.31□□□□□ -0.44
LINC01560-202ENST00000624822 EXOSC9Q06265 439 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms