RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 FAM177BA6PVY3 158 aa18.18■□□□□ 0.5
USH1C-211ENST00000624811 C21orf2O43822 256 aa18.18■□□□□ 0.5
USH1C-211ENST00000624811 ST5P78524 1137 aa18.18■□□□□ 0.5
USH1C-211ENST00000624811 MAPK8IP3Q9UPT6 1336 aa18.18■□□□□ 0.5
USH1C-211ENST00000624811 FER1L6Q2WGJ9 1857 aa18.18■□□□□ 0.5
USH1C-211ENST00000624811 ARFGEF2Q9Y6D5 1785 aa18.17■□□□□ 0.5
USH1C-211ENST00000624811 NFKBIEO00221 500 aa18.17■□□□□ 0.5
USH1C-211ENST00000624811 LMNB1P20700 586 aa18.17■□□□□ 0.5
USH1C-211ENST00000624811 NFE2L2Q16236 605 aa18.17■□□□□ 0.5
USH1C-211ENST00000624811 NGEFQ8N5V2 710 aa18.17■□□□□ 0.5
USH1C-211ENST00000624811 NBPF5PQ86XG9 351 aaPredicted RBP18.16■□□□□ 0.5
USH1C-211ENST00000624811 ZNF652Q9Y2D9 606 aa18.16■□□□□ 0.5
USH1C-211ENST00000624811 DICER1Q9UPY3 1922 aaKnown RBP18.15■□□□□ 0.5
USH1C-211ENST00000624811 NUP98P52948 1817 aa18.15■□□□□ 0.5
USH1C-211ENST00000624811 PDZRN3Q9UPQ7 1066 aa18.15■□□□□ 0.5
USH1C-211ENST00000624811 NIP7Q9Y221 180 aaKnown RBP eCLIP18.15■□□□□ 0.5
USH1C-211ENST00000624811 DDX10Q13206 875 aaKnown RBP18.14■□□□□ 0.49
USH1C-211ENST00000624811 HLFQ16534 295 aa18.14■□□□□ 0.49
USH1C-211ENST00000624811 CLEC4GQ6UXB4 293 aa18.14■□□□□ 0.49
USH1C-211ENST00000624811 RBM46Q8TBY0 533 aaKnown RBP18.14■□□□□ 0.49
USH1C-211ENST00000624811 PNISRQ8TF01 805 aaKnown RBP18.14■□□□□ 0.49
USH1C-211ENST00000624811 WDR90Q96KV7 1748 aa18.14■□□□□ 0.49
USH1C-211ENST00000624811 SRGNP10124 158 aa18.13■□□□□ 0.49
USH1C-211ENST00000624811 PNNQ9H307 717 aaKnown RBP18.13■□□□□ 0.49
USH1C-211ENST00000624811 RRP7AQ9Y3A4 280 aaKnown RBP18.13■□□□□ 0.49
USH1C-211ENST00000624811 APLP1P51693 650 aa18.12■□□□□ 0.49
USH1C-211ENST00000624811 EIF4A1P60842 406 aaKnown RBP18.12■□□□□ 0.49
USH1C-211ENST00000624811 STYK1Q6J9G0 422 aa18.12■□□□□ 0.49
USH1C-211ENST00000624811 PRPF40BQ6NWY9 871 aaKnown RBP18.12■□□□□ 0.49
USH1C-211ENST00000624811 CNKSR1Q969H4 720 aa18.12■□□□□ 0.49
USH1C-211ENST00000624811 MASTLQ96GX5 879 aa18.12■□□□□ 0.49
USH1C-211ENST00000624811 MYL6BP14649 208 aa18.11■□□□□ 0.49
USH1C-211ENST00000624811 RALBP1Q15311 655 aa18.11■□□□□ 0.49
USH1C-211ENST00000624811 ZC3H4Q9UPT8 1303 aaKnown RBP18.11■□□□□ 0.49
USH1C-211ENST00000624811 GLTPD2A6NH11 291 aa18.1■□□□□ 0.49
USH1C-211ENST00000624811 RIPK4P57078 832 aa18.1■□□□□ 0.49
USH1C-211ENST00000624811 HTRA3P83110 453 aa18.1■□□□□ 0.49
USH1C-211ENST00000624811 TPTE2Q6XPS3 522 aa18.1■□□□□ 0.49
USH1C-211ENST00000624811 GTF2E1P29083 439 aaPredicted RBP18.09■□□□□ 0.49
USH1C-211ENST00000624811 ERFEQ4G0M1 354 aa18.09■□□□□ 0.49
USH1C-211ENST00000624811 TTLL7Q6ZT98 887 aa18.09■□□□□ 0.49
USH1C-211ENST00000624811 CCDC146Q8IYE0 955 aa18.09■□□□□ 0.49
USH1C-211ENST00000624811 TAOK3Q9H2K8 898 aa18.09■□□□□ 0.49
USH1C-211ENST00000624811 TSPYL4Q9UJ04 414 aa18.09■□□□□ 0.49
USH1C-211ENST00000624811 KIF6Q6ZMV9 814 aa18.08■□□□□ 0.48
USH1C-211ENST00000624811 ZBTB3Q9H5J0 574 aa18.08■□□□□ 0.48
USH1C-211ENST00000624811 FSTL1Q12841 308 aa18.07■□□□□ 0.48
USH1C-211ENST00000624811 NUTM1Q86Y26 1132 aa18.07■□□□□ 0.48
USH1C-211ENST00000624811 MAP3K15Q6ZN16 1313 aa18.06■□□□□ 0.48
USH1C-211ENST00000624811 MYBBP1AQ9BQG0 1328 aaKnown RBP18.06■□□□□ 0.48
USH1C-211ENST00000624811 VEGFAP15692 232 aaPredicted RBP18.06■□□□□ 0.48
USH1C-211ENST00000624811 NPR1P16066 1061 aa18.06■□□□□ 0.48
USH1C-211ENST00000624811 GPTP24298 496 aa18.06■□□□□ 0.48
USH1C-211ENST00000624811 NEUROD2Q15784 382 aa18.06■□□□□ 0.48
USH1C-211ENST00000624811 OLFM4Q6UX06 510 aa18.06■□□□□ 0.48
USH1C-211ENST00000624811 ABCC12Q96J65 1359 aa18.05■□□□□ 0.48
USH1C-211ENST00000624811 RGL2O15211 777 aa18.05■□□□□ 0.48
USH1C-211ENST00000624811 EIF2S2P20042 333 aaKnown RBP18.05■□□□□ 0.48
USH1C-211ENST00000624811 TMPOP42166 694 aaKnown RBP18.05■□□□□ 0.48
USH1C-211ENST00000624811 DPY19L2Q6NUT2 758 aa18.05■□□□□ 0.48
USH1C-211ENST00000624811 SMC1BQ8NDV3 1235 aa18.05■□□□□ 0.48
USH1C-211ENST00000624811 LTBP3Q9NS15 1303 aa18.04■□□□□ 0.48
USH1C-211ENST00000624811 CCDC93Q567U6 631 aa18.04■□□□□ 0.48
USH1C-211ENST00000624811 SOGA3Q5TF21 947 aa18.04■□□□□ 0.48
USH1C-211ENST00000624811 KLRG2A4D1S0 409 aaPredicted RBP18.03■□□□□ 0.48
USH1C-211ENST00000624811 POTECB2RU33 542 aa18.03■□□□□ 0.48
USH1C-211ENST00000624811 ERVV-1B6SEH8 477 aa18.03■□□□□ 0.48
USH1C-211ENST00000624811 ANXA1P04083 346 aa18.03■□□□□ 0.48
USH1C-211ENST00000624811 DNAJC5GQ8N7S2 189 aa18.03■□□□□ 0.48
USH1C-211ENST00000624811 C7orf43Q8WVR3 580 aa18.03■□□□□ 0.48
USH1C-211ENST00000624811 NECTIN2Q92692 538 aa18.03■□□□□ 0.48
USH1C-211ENST00000624811 UBN2Q6ZU65 1347 aa18.02■□□□□ 0.48
USH1C-211ENST00000624811 DDNO94850 711 aaPredicted RBP18.02■□□□□ 0.48
USH1C-211ENST00000624811 PROSER3Q2NL68 480 aa18.02■□□□□ 0.48
USH1C-211ENST00000624811 SUSD4Q5VX71 490 aa18.02■□□□□ 0.48
USH1C-211ENST00000624811 NYXQ9GZU5 481 aa18.02■□□□□ 0.48
USH1C-211ENST00000624811 ZNF277Q9NRM2 450 aaPredicted RBP18.02■□□□□ 0.48
USH1C-211ENST00000624811 LAS1LQ9Y4W2 734 aaKnown RBP18.02■□□□□ 0.48
USH1C-211ENST00000624811 LMOD3Q0VAK6 560 aa18.01■□□□□ 0.47
USH1C-211ENST00000624811 WDR43Q15061 677 aaKnown RBP eCLIP18.01■□□□□ 0.47
USH1C-211ENST00000624811 ANKRD36CQ5JPF3 1778 aa18■□□□□ 0.47
USH1C-211ENST00000624811 FKBP4Q02790 459 aaKnown RBP eCLIP18■□□□□ 0.47
USH1C-211ENST00000624811 ERBB4Q15303 1308 aa17.99■□□□□ 0.47
USH1C-211ENST00000624811 ALDH1B1P30837 517 aa17.99■□□□□ 0.47
USH1C-211ENST00000624811 PDIA6Q15084 440 aa17.99■□□□□ 0.47
USH1C-211ENST00000624811 KRT24Q2M2I5 525 aa17.99■□□□□ 0.47
USH1C-211ENST00000624811 ZNF34Q8IZ26 560 aa17.99■□□□□ 0.47
USH1C-211ENST00000624811 AIMP1Q12904 312 aaKnown RBP17.98■□□□□ 0.47
USH1C-211ENST00000624811 GIGYF2Q6Y7W6 1299 aaKnown RBP17.98■□□□□ 0.47
USH1C-211ENST00000624811 RPGRQ92834 1020 aaKnown RBP17.98■□□□□ 0.47
USH1C-211ENST00000624811 RUNDC1Q96C34 613 aa17.98■□□□□ 0.47
USH1C-211ENST00000624811 TCERG1O14776 1098 aaKnown RBP17.97■□□□□ 0.47
USH1C-211ENST00000624811 NTSR2O95665 410 aa17.97■□□□□ 0.47
USH1C-211ENST00000624811 CRY2Q49AN0 593 aa17.97■□□□□ 0.47
USH1C-211ENST00000624811 C3orf67Q6ZVT6 689 aa17.97■□□□□ 0.47
USH1C-211ENST00000624811 LRP10Q7Z4F1 713 aa17.97■□□□□ 0.47
USH1C-211ENST00000624811 SLC51AQ86UW1 340 aa17.97■□□□□ 0.47
USH1C-211ENST00000624811 RTKN2Q8IZC4 609 aa17.97■□□□□ 0.47
USH1C-211ENST00000624811 KLRG1Q96E93 195 aa17.97■□□□□ 0.47
USH1C-211ENST00000624811 ADAMTS8Q9UP79 889 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms