RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 ERICH2A1L162 156 aa13.8□□□□□ -0.2
ATRX-214ENST00000624166 GTF2F1P35269 517 aaKnown RBP eCLIP13.8□□□□□ -0.26e-9■■■■■ 35.5
ATRX-214ENST00000624166 CCAR1Q8IX12 1150 aaKnown RBP13.8□□□□□ -0.2
ATRX-214ENST00000624166 BBXQ8WY36 941 aaPredicted RBP13.8□□□□□ -0.2
ATRX-214ENST00000624166 AOX1Q06278 1338 aa13.8□□□□□ -0.2
ATRX-214ENST00000624166 TXLNBQ8N3L3 684 aa13.8□□□□□ -0.2
ATRX-214ENST00000624166 SRRTQ9BXP5 876 aaKnown RBP13.8□□□□□ -0.2
ATRX-214ENST00000624166 DNAJC25Q9H1X3 360 aa13.8□□□□□ -0.2
ATRX-214ENST00000624166 PPIP5K1Q6PFW1 1433 aa13.8□□□□□ -0.2
ATRX-214ENST00000624166 FAM177BA6PVY3 158 aa13.79□□□□□ -0.2
ATRX-214ENST00000624166 GADD45BO75293 160 aaPredicted RBP13.79□□□□□ -0.2
ATRX-214ENST00000624166 TOP1P11387 765 aaKnown RBP13.79□□□□□ -0.2
ATRX-214ENST00000624166 TMC6Q7Z403 805 aa13.79□□□□□ -0.2
ATRX-214ENST00000624166 KLHL34Q8N239 644 aa13.79□□□□□ -0.2
ATRX-214ENST00000624166 NECAB1Q8N987 351 aa13.79□□□□□ -0.2
ATRX-214ENST00000624166 POLR3GO15318 223 aaPredicted RBP13.79□□□□□ -0.2
ATRX-214ENST00000624166 U2AF2P26368 475 aaKnown RBP eCLIP13.79□□□□□ -0.22e-11■■■■■ 31.7
ATRX-214ENST00000624166 ERO1AQ96HE7 468 aa13.79□□□□□ -0.2
ATRX-214ENST00000624166 CDKL5O76039 1030 aa13.79□□□□□ -0.2
ATRX-214ENST00000624166 XBP1P17861 261 aa13.79□□□□□ -0.2
ATRX-214ENST00000624166 CASQ1P31415 396 aa13.79□□□□□ -0.2
ATRX-214ENST00000624166 DMTNQ08495 405 aa13.79□□□□□ -0.2
ATRX-214ENST00000624166 PCMTD1Q96MG8 357 aaPredicted RBP13.79□□□□□ -0.2
ATRX-214ENST00000624166 BOLA2Q9H3K6 86 aa13.79□□□□□ -0.2
ATRX-214ENST00000624166 MSH6P52701 1360 aa13.79□□□□□ -0.2
ATRX-214ENST00000624166 FBLN1P23142 703 aa13.78□□□□□ -0.2
ATRX-214ENST00000624166 CAGE1Q8TC20 777 aa13.78□□□□□ -0.2
ATRX-214ENST00000624166 PDLIM2Q96JY6 352 aa13.78□□□□□ -0.2
ATRX-214ENST00000624166 TTC41PQ6P2S7 1318 aa13.78□□□□□ -0.2
ATRX-214ENST00000624166 SSH2Q76I76 1423 aa13.78□□□□□ -0.2
ATRX-214ENST00000624166 SLC3A2P08195 630 aaKnown RBP13.78□□□□□ -0.2
ATRX-214ENST00000624166 LUZP1Q86V48 1076 aa13.78□□□□□ -0.2
ATRX-214ENST00000624166 C17orf53Q8N3J3 647 aaPredicted RBP13.78□□□□□ -0.2
ATRX-214ENST00000624166 ABTB2Q8N961 1025 aa13.78□□□□□ -0.2
ATRX-214ENST00000624166 PLA2R1Q13018 1463 aa13.78□□□□□ -0.2
ATRX-214ENST00000624166 PHF23Q9BUL5 403 aaPredicted RBP13.78□□□□□ -0.2
ATRX-214ENST00000624166 PLXNC1O60486 1568 aa13.77□□□□□ -0.2
ATRX-214ENST00000624166 H0YHG0 523 aa13.77□□□□□ -0.2
ATRX-214ENST00000624166 POTEB2H3BUK9 544 aa13.77□□□□□ -0.2
ATRX-214ENST00000624166 PLEKHF1Q96S99 279 aa13.77□□□□□ -0.2
ATRX-214ENST00000624166 RBM8AQ9Y5S9 174 aaKnown RBP13.77□□□□□ -0.2
ATRX-214ENST00000624166 ATP10AO60312 1499 aa13.77□□□□□ -0.2
ATRX-214ENST00000624166 USP8P40818 1118 aa13.77□□□□□ -0.21
ATRX-214ENST00000624166 ZNF530Q6P9A1 599 aaPredicted RBP13.77□□□□□ -0.21
ATRX-214ENST00000624166 DEF6Q9H4E7 631 aa13.77□□□□□ -0.21
ATRX-214ENST00000624166 SOS1Q07889 1333 aaPredicted RBP13.77□□□□□ -0.21
ATRX-214ENST00000624166 IGSF3O75054 1194 aa13.77□□□□□ -0.21
ATRX-214ENST00000624166 TTLL5Q6EMB2 1281 aa13.77□□□□□ -0.21
ATRX-214ENST00000624166 NEK1Q96PY6 1258 aa13.77□□□□□ -0.21
ATRX-214ENST00000624166 CCDC69A6NI79 296 aa13.76□□□□□ -0.21
ATRX-214ENST00000624166 PSME1Q06323 249 aa13.76□□□□□ -0.21
ATRX-214ENST00000624166 JAKMIP3Q5VZ66 844 aa13.76□□□□□ -0.21
ATRX-214ENST00000624166 NUTM2GQ5VZR2 741 aa13.76□□□□□ -0.21
ATRX-214ENST00000624166 RAPGEF4Q8WZA2 1011 aa13.76□□□□□ -0.21
ATRX-214ENST00000624166 CCDC102AQ96A19 550 aa13.76□□□□□ -0.21
ATRX-214ENST00000624166 RIMS2Q9UQ26 1411 aa13.76□□□□□ -0.21
ATRX-214ENST00000624166 BTBD11A6QL63 1104 aa13.76□□□□□ -0.21
ATRX-214ENST00000624166 RAPGEF3O95398 923 aa13.76□□□□□ -0.21
ATRX-214ENST00000624166 AXDND1Q5T1B0 1012 aaPredicted RBP13.76□□□□□ -0.21
ATRX-214ENST00000624166 SART3Q15020 963 aaKnown RBP13.76□□□□□ -0.21
ATRX-214ENST00000624166 ARHGAP29Q52LW3 1261 aa13.76□□□□□ -0.21
ATRX-214ENST00000624166 C8orf76Q96K31 380 aa13.76□□□□□ -0.21
ATRX-214ENST00000624166 BRMS1Q9HCU9 246 aa13.76□□□□□ -0.21
ATRX-214ENST00000624166 HSPA4P34932 840 aa13.75□□□□□ -0.21
ATRX-214ENST00000624166 CCDC8Q9H0W5 538 aaPredicted RBP13.75□□□□□ -0.21
ATRX-214ENST00000624166 RAD50Q92878 1312 aa13.75□□□□□ -0.21
ATRX-214ENST00000624166 KIF5CO60282 957 aa13.75□□□□□ -0.21
ATRX-214ENST00000624166 ZNF75DP51815 510 aa13.75□□□□□ -0.21
ATRX-214ENST00000624166 CDR1P51861 262 aa13.75□□□□□ -0.21
ATRX-214ENST00000624166 CUL4AQ13619 759 aa13.74□□□□□ -0.21
ATRX-214ENST00000624166 CCDC158Q5M9N0 1113 aa13.74□□□□□ -0.21
ATRX-214ENST00000624166 RUFY3Q7L099 469 aa13.74□□□□□ -0.21
ATRX-214ENST00000624166 DBF4Q9UBU7 674 aaPredicted RBP13.74□□□□□ -0.21
ATRX-214ENST00000624166 SGSM2O43147 1006 aa13.74□□□□□ -0.21
ATRX-214ENST00000624166 ARFGAP3Q9NP61 516 aa13.74□□□□□ -0.21
ATRX-214ENST00000624166 TSC1Q92574 1164 aa13.74□□□□□ -0.21
ATRX-214ENST00000624166 TRERF1Q96PN7 1200 aa13.74□□□□□ -0.21
ATRX-214ENST00000624166 SNX14Q9Y5W7 946 aa13.74□□□□□ -0.21
ATRX-214ENST00000624166 CHL1O00533 1208 aa13.73□□□□□ -0.21
ATRX-214ENST00000624166 IL13P35225 146 aa13.73□□□□□ -0.21
ATRX-214ENST00000624166 TRIM22Q8IYM9 498 aa13.73□□□□□ -0.21
ATRX-214ENST00000624166 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.73□□□□□ -0.21
ATRX-214ENST00000624166 V9GYY5 206 aaPredicted RBP13.73□□□□□ -0.21
ATRX-214ENST00000624166 KRT24Q2M2I5 525 aa13.73□□□□□ -0.21
ATRX-214ENST00000624166 RDXP35241 583 aaKnown RBP13.73□□□□□ -0.21
ATRX-214ENST00000624166 MRPS27Q92552 414 aaKnown RBP13.73□□□□□ -0.21
ATRX-214ENST00000624166 DNAI1Q9UI46 699 aa13.73□□□□□ -0.21
ATRX-214ENST00000624166 MCM3P25205 808 aa13.73□□□□□ -0.21
ATRX-214ENST00000624166 EIF4A2Q14240 407 aaKnown RBP13.73□□□□□ -0.21
ATRX-214ENST00000624166 IMMTQ16891 758 aaKnown RBP13.73□□□□□ -0.21
ATRX-214ENST00000624166 LARP1Q6PKG0 1096 aaKnown RBP13.73□□□□□ -0.21
ATRX-214ENST00000624166 FAM107BQ9H098 131 aa13.73□□□□□ -0.21
ATRX-214ENST00000624166 CLSTN2Q9H4D0 955 aa13.73□□□□□ -0.21
ATRX-214ENST00000624166 OSBPL3Q9H4L5 887 aa13.73□□□□□ -0.21
ATRX-214ENST00000624166 CBX8Q9HC52 389 aa13.73□□□□□ -0.21
ATRX-214ENST00000624166 RGS12O14924 1447 aa13.72□□□□□ -0.21
ATRX-214ENST00000624166 MAP9Q49MG5 647 aa13.72□□□□□ -0.21
ATRX-214ENST00000624166 AOPEPQ8N6M6 819 aa13.72□□□□□ -0.21
ATRX-214ENST00000624166 ZNHIT6Q9NWK9 470 aaKnown RBP13.72□□□□□ -0.21
ATRX-214ENST00000624166 TRPM2O94759 1503 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms