RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 ABCB7O75027 752 aa9.56□□□□□ -0.88
CDKL5-204ENST00000623364 ZNF157P51786 506 aaPredicted RBP9.56□□□□□ -0.88
CDKL5-204ENST00000623364 LTV1Q96GA3 475 aaPredicted RBP9.56□□□□□ -0.88
CDKL5-204ENST00000623364 CABP1Q9NZU7 370 aa9.56□□□□□ -0.88
CDKL5-204ENST00000623364 LAMA3Q16787 3333 aa9.56□□□□□ -0.88
CDKL5-204ENST00000623364 TTC21BQ7Z4L5 1316 aa9.56□□□□□ -0.88
CDKL5-204ENST00000623364 TTC21AQ8NDW8 1320 aa9.56□□□□□ -0.88
CDKL5-204ENST00000623364 PCDH11XQ9BZA7 1347 aa9.56□□□□□ -0.88
CDKL5-204ENST00000623364 PCDH11YQ9BZA8 1340 aa9.56□□□□□ -0.88
CDKL5-204ENST00000623364 USP42Q9H9J4 1324 aaKnown RBP9.56□□□□□ -0.88
CDKL5-204ENST00000623364 NOM1Q5C9Z4 860 aaKnown RBP9.55□□□□□ -0.88
CDKL5-204ENST00000623364 LTN1O94822 1766 aa9.55□□□□□ -0.88
CDKL5-204ENST00000623364 CNTNAP4Q9C0A0 1308 aa9.55□□□□□ -0.88
CDKL5-204ENST00000623364 FZD9O00144 591 aa9.54□□□□□ -0.88
CDKL5-204ENST00000623364 GPR25O00155 361 aa9.54□□□□□ -0.88
CDKL5-204ENST00000623364 TBC1D8O95759 1140 aa9.54□□□□□ -0.88
CDKL5-204ENST00000623364 EPS15P42566 896 aa9.54□□□□□ -0.88
CDKL5-204ENST00000623364 GLIS2Q9BZE0 524 aaPredicted RBP9.54□□□□□ -0.88
CDKL5-204ENST00000623364 PDZRN3Q9UPQ7 1066 aa9.54□□□□□ -0.88
CDKL5-204ENST00000623364 GJA3Q9Y6H8 435 aa9.54□□□□□ -0.88
CDKL5-204ENST00000623364 RPTORQ8N122 1335 aa9.54□□□□□ -0.88
CDKL5-204ENST00000623364 FKTNO75072 461 aa9.53□□□□□ -0.88
CDKL5-204ENST00000623364 RAPGEF4Q8WZA2 1011 aa9.53□□□□□ -0.88
CDKL5-204ENST00000623364 P2RX7Q99572 595 aaKnown RBP9.53□□□□□ -0.88
CDKL5-204ENST00000623364 ASAP1Q9ULH1 1129 aa9.53□□□□□ -0.88
CDKL5-204ENST00000623364 NR2E3Q9Y5X4 410 aa9.53□□□□□ -0.88
CDKL5-204ENST00000623364 CD163L1Q9NR16 1453 aa9.53□□□□□ -0.88
CDKL5-204ENST00000623364 SLC4A2P04920 1241 aa9.52□□□□□ -0.89
CDKL5-204ENST00000623364 ITGAEP38570 1179 aa9.52□□□□□ -0.89
CDKL5-204ENST00000623364 ALYREFQ86V81 257 aaKnown RBP9.52□□□□□ -0.89
CDKL5-204ENST00000623364 ZNF277Q9NRM2 450 aaPredicted RBP9.52□□□□□ -0.89
CDKL5-204ENST00000623364 TMOD3Q9NYL9 352 aa9.52□□□□□ -0.89
CDKL5-204ENST00000623364 HCN4Q9Y3Q4 1203 aa9.52□□□□□ -0.89
CDKL5-204ENST00000623364 MAP3K19Q56UN5 1328 aa9.52□□□□□ -0.89
CDKL5-204ENST00000623364 ZPR1O75312 459 aa9.51□□□□□ -0.89
CDKL5-204ENST00000623364 SERPINB2P05120 415 aa9.51□□□□□ -0.89
CDKL5-204ENST00000623364 SLC10A3P09131 477 aa9.51□□□□□ -0.89
CDKL5-204ENST00000623364 PDE6BP35913 854 aa9.51□□□□□ -0.89
CDKL5-204ENST00000623364 CDC37L1Q7L3B6 337 aa9.51□□□□□ -0.89
CDKL5-204ENST00000623364 C2orf69Q8N8R5 385 aa9.51□□□□□ -0.89
CDKL5-204ENST00000623364 CNKSR1Q969H4 720 aa9.51□□□□□ -0.89
CDKL5-204ENST00000623364 ARMC5Q96C12 935 aa9.51□□□□□ -0.89
CDKL5-204ENST00000623364 ZNF692Q9BU19 519 aaPredicted RBP9.51□□□□□ -0.89
CDKL5-204ENST00000623364 AFDNP55196 1824 aaKnown RBP9.51□□□□□ -0.89
CDKL5-204ENST00000623364 SCNN1DP51172 638 aa9.5□□□□□ -0.89
CDKL5-204ENST00000623364 EIF6P56537 245 aaKnown RBP9.5□□□□□ -0.89
CDKL5-204ENST00000623364 FKBP4Q02790 459 aaKnown RBP eCLIP9.5□□□□□ -0.89
CDKL5-204ENST00000623364 JDP2Q8WYK2 163 aa9.5□□□□□ -0.89
CDKL5-204ENST00000623364 IP6K1Q92551 441 aa9.5□□□□□ -0.89
CDKL5-204ENST00000623364 TRIM17Q9Y577 477 aa9.5□□□□□ -0.89
CDKL5-204ENST00000623364 TATP17735 454 aaPredicted RBP9.49□□□□□ -0.89
CDKL5-204ENST00000623364 NFIXQ14938 502 aa9.49□□□□□ -0.89
CDKL5-204ENST00000623364 SLC4A8Q2Y0W8 1093 aa9.49□□□□□ -0.89
CDKL5-204ENST00000623364 CCDC93Q567U6 631 aa9.49□□□□□ -0.89
CDKL5-204ENST00000623364 PRPF40BQ6NWY9 871 aaKnown RBP9.49□□□□□ -0.89
CDKL5-204ENST00000623364 ADARB2Q9NS39 739 aaKnown RBP9.49□□□□□ -0.89
CDKL5-204ENST00000623364 NRXN2Q9P2S2 1712 aa9.48□□□□□ -0.89
CDKL5-204ENST00000623364 KCNA4P22459 653 aa9.48□□□□□ -0.89
CDKL5-204ENST00000623364 RBM42Q9BTD8 480 aaKnown RBP9.48□□□□□ -0.89
CDKL5-204ENST00000623364 GBA2Q9HCG7 927 aaPredicted RBP9.48□□□□□ -0.89
CDKL5-204ENST00000623364 HTTP42858 3142 aa9.48□□□□□ -0.89
CDKL5-204ENST00000623364 MUC3AQ02505 3323 aa9.47□□□□□ -0.89
CDKL5-204ENST00000623364 CYP27B1O15528 508 aa9.47□□□□□ -0.89
CDKL5-204ENST00000623364 IARSP41252 1262 aaKnown RBP9.47□□□□□ -0.89
CDKL5-204ENST00000623364 USPL1Q5W0Q7 1092 aa9.47□□□□□ -0.89
CDKL5-204ENST00000623364 OTOP1Q7RTM1 612 aa9.47□□□□□ -0.89
CDKL5-204ENST00000623364 ZC3H15Q8WU90 426 aaKnown RBP9.47□□□□□ -0.89
CDKL5-204ENST00000623364 HTATIP2Q9BUP3 242 aa9.47□□□□□ -0.89
CDKL5-204ENST00000623364 ATG3Q9NT62 314 aa9.47□□□□□ -0.89
CDKL5-204ENST00000623364 PGAP2Q9UHJ9 254 aa9.47□□□□□ -0.89
CDKL5-204ENST00000623364 MUC6Q6W4X9 2439 aa9.47□□□□□ -0.89
CDKL5-204ENST00000623364 KDRP35968 1356 aa9.47□□□□□ -0.89
CDKL5-204ENST00000623364 CARMIL3Q8ND23 1372 aa9.47□□□□□ -0.89
CDKL5-204ENST00000623364 SLX4Q8IY92 1834 aa9.47□□□□□ -0.89
CDKL5-204ENST00000623364 CENPFP49454 3210 aa9.46□□□□□ -0.89
CDKL5-204ENST00000623364 NCOR1O75376 2440 aa9.46□□□□□ -0.89
CDKL5-204ENST00000623364 ZBTB7BO15156 539 aaPredicted RBP9.46□□□□□ -0.9
CDKL5-204ENST00000623364 BRIP1Q9BX63 1249 aa9.46□□□□□ -0.9
CDKL5-204ENST00000623364 MYH14Q7Z406 1995 aaKnown RBP9.46□□□□□ -0.9
CDKL5-204ENST00000623364 COL5A3P25940 1745 aaPredicted RBP9.45□□□□□ -0.9
CDKL5-204ENST00000623364 LAMA2P24043 3122 aaKnown RBP9.45□□□□□ -0.9
CDKL5-204ENST00000623364 BCORQ6W2J9 1755 aa9.45□□□□□ -0.9
CDKL5-204ENST00000623364 STYK1Q6J9G0 422 aa9.45□□□□□ -0.9
CDKL5-204ENST00000623364 RTKN2Q8IZC4 609 aa9.45□□□□□ -0.9
CDKL5-204ENST00000623364 STAP2Q9UGK3 403 aa9.45□□□□□ -0.9
CDKL5-204ENST00000623364 PTPN22Q9Y2R2 807 aa9.45□□□□□ -0.9
CDKL5-204ENST00000623364 ZNF831Q5JPB2 1677 aa9.45□□□□□ -0.9
CDKL5-204ENST00000623364 CRKLP46109 303 aaKnown RBP9.44□□□□□ -0.9
CDKL5-204ENST00000623364 LRIT3Q3SXY7 679 aa9.44□□□□□ -0.9
CDKL5-204ENST00000623364 TJAP1Q5JTD0 557 aa9.44□□□□□ -0.9
CDKL5-204ENST00000623364 NBPF11Q86T75 865 aa9.44□□□□□ -0.9
CDKL5-204ENST00000623364 USP48Q86UV5 1035 aa9.44□□□□□ -0.9
CDKL5-204ENST00000623364 COL26A1Q96A83 441 aa9.44□□□□□ -0.9
CDKL5-204ENST00000623364 ZNF333Q96JL9 665 aa9.44□□□□□ -0.9
CDKL5-204ENST00000623364 SLC4A9Q96Q91 983 aa9.44□□□□□ -0.9
CDKL5-204ENST00000623364 C1QTNF1Q9BXJ1 281 aa9.44□□□□□ -0.9
CDKL5-204ENST00000623364 GPRC5DQ9NZD1 345 aa9.44□□□□□ -0.9
CDKL5-204ENST00000623364 MON2Q7Z3U7 1717 aa9.43□□□□□ -0.9
CDKL5-204ENST00000623364 WTIPA6NIX2 430 aaPredicted RBP9.43□□□□□ -0.9
CDKL5-204ENST00000623364 NKX1-1Q15270 411 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms