RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 ARFGEF2Q9Y6D5 1785 aa13.4□□□□□ -0.26
PCDHGC3-207ENST00000622656 FER1L6Q2WGJ9 1857 aa13.4□□□□□ -0.26
PCDHGC3-207ENST00000622656 MYL6BP14649 208 aa13.39□□□□□ -0.27
PCDHGC3-207ENST00000622656 C9orf131Q5VYM1 1079 aa13.39□□□□□ -0.27
PCDHGC3-207ENST00000622656 GPBP1L1Q9HC44 474 aaPredicted RBP13.39□□□□□ -0.27
PCDHGC3-207ENST00000622656 TSPYL4Q9UJ04 414 aa13.39□□□□□ -0.27
PCDHGC3-207ENST00000622656 TNRC6CQ9HCJ0 1690 aaKnown RBP13.39□□□□□ -0.27
PCDHGC3-207ENST00000622656 FAM177BA6PVY3 158 aa13.38□□□□□ -0.27
PCDHGC3-207ENST00000622656 ANXA1P04083 346 aa13.38□□□□□ -0.27
PCDHGC3-207ENST00000622656 WDR43Q15061 677 aaKnown RBP eCLIP13.38□□□□□ -0.27
PCDHGC3-207ENST00000622656 NPM2Q86SE8 214 aaKnown RBP13.38□□□□□ -0.27
PCDHGC3-207ENST00000622656 CNBD1Q8NA66 436 aa13.38□□□□□ -0.27
PCDHGC3-207ENST00000622656 RUNDC1Q96C34 613 aa13.38□□□□□ -0.27
PCDHGC3-207ENST00000622656 BRIP1Q9BX63 1249 aa13.38□□□□□ -0.27
PCDHGC3-207ENST00000622656 ZNF219Q9P2Y4 722 aaPredicted RBP13.38□□□□□ -0.27
PCDHGC3-207ENST00000622656 CEP350Q5VT06 3117 aa13.38□□□□□ -0.27
PCDHGC3-207ENST00000622656 TIAM2Q8IVF5 1701 aa13.37□□□□□ -0.27
PCDHGC3-207ENST00000622656 H0YIN7 160 aa13.37□□□□□ -0.27
PCDHGC3-207ENST00000622656 KIF3CO14782 793 aa13.37□□□□□ -0.27
PCDHGC3-207ENST00000622656 PDIA6Q15084 440 aa13.37□□□□□ -0.27
PCDHGC3-207ENST00000622656 PROSER3Q2NL68 480 aa13.37□□□□□ -0.27
PCDHGC3-207ENST00000622656 CLEC4GQ6UXB4 293 aa13.37□□□□□ -0.27
PCDHGC3-207ENST00000622656 LRP10Q7Z4F1 713 aa13.37□□□□□ -0.27
PCDHGC3-207ENST00000622656 TTLL6Q8N841 843 aa13.37□□□□□ -0.27
PCDHGC3-207ENST00000622656 ZNF622Q969S3 477 aaKnown RBP eCLIP13.37□□□□□ -0.27
PCDHGC3-207ENST00000622656 NIP7Q9Y221 180 aaKnown RBP eCLIP13.37□□□□□ -0.27
PCDHGC3-207ENST00000622656 NFKBIEO00221 500 aa13.36□□□□□ -0.27
PCDHGC3-207ENST00000622656 NECTIN2Q92692 538 aa13.36□□□□□ -0.27
PCDHGC3-207ENST00000622656 NMRK2Q9NPI5 230 aa13.36□□□□□ -0.27
PCDHGC3-207ENST00000622656 RNF181Q9P0P0 153 aa13.36□□□□□ -0.27
PCDHGC3-207ENST00000622656 DICER1Q9UPY3 1922 aaKnown RBP13.36□□□□□ -0.27
PCDHGC3-207ENST00000622656 SRGNP10124 158 aa13.35□□□□□ -0.27
PCDHGC3-207ENST00000622656 EIF2S2P20042 333 aaKnown RBP13.35□□□□□ -0.27
PCDHGC3-207ENST00000622656 PDE6BP35913 854 aa13.35□□□□□ -0.27
PCDHGC3-207ENST00000622656 NBPF5PQ86XG9 351 aaPredicted RBP13.35□□□□□ -0.27
PCDHGC3-207ENST00000622656 ZBTB3Q9H5J0 574 aa13.35□□□□□ -0.27
PCDHGC3-207ENST00000622656 LAS1LQ9Y4W2 734 aaKnown RBP13.35□□□□□ -0.27
PCDHGC3-207ENST00000622656 MAP3K15Q6ZN16 1313 aa13.35□□□□□ -0.27
PCDHGC3-207ENST00000622656 UBN2Q6ZU65 1347 aa13.35□□□□□ -0.27
PCDHGC3-207ENST00000622656 ABCC12Q96J65 1359 aa13.34□□□□□ -0.27
PCDHGC3-207ENST00000622656 CHL1O00533 1208 aa13.34□□□□□ -0.27
PCDHGC3-207ENST00000622656 C21orf2O43822 256 aa13.34□□□□□ -0.27
PCDHGC3-207ENST00000622656 ZNF652Q9Y2D9 606 aa13.34□□□□□ -0.27
PCDHGC3-207ENST00000622656 ANKRD36CQ5JPF3 1778 aa13.34□□□□□ -0.27
PCDHGC3-207ENST00000622656 APAF1O14727 1248 aa13.33□□□□□ -0.28
PCDHGC3-207ENST00000622656 NPHP1O15259 732 aa13.33□□□□□ -0.28
PCDHGC3-207ENST00000622656 GPTP24298 496 aa13.33□□□□□ -0.28
PCDHGC3-207ENST00000622656 ST5P78524 1137 aa13.33□□□□□ -0.28
PCDHGC3-207ENST00000622656 LMOD3Q0VAK6 560 aa13.33□□□□□ -0.28
PCDHGC3-207ENST00000622656 OLFM4Q6UX06 510 aa13.33□□□□□ -0.28
PCDHGC3-207ENST00000622656 SLC51AQ86UW1 340 aa13.33□□□□□ -0.28
PCDHGC3-207ENST00000622656 NUTM1Q86Y26 1132 aa13.33□□□□□ -0.28
PCDHGC3-207ENST00000622656 ERVV-1B6SEH8 477 aa13.32□□□□□ -0.28
PCDHGC3-207ENST00000622656 PRPF40BQ6NWY9 871 aaKnown RBP13.32□□□□□ -0.28
PCDHGC3-207ENST00000622656 BABAM1Q9NWV8 329 aa13.32□□□□□ -0.28
PCDHGC3-207ENST00000622656 LAMB2P55268 1798 aa13.32□□□□□ -0.28
PCDHGC3-207ENST00000622656 KLRG2A4D1S0 409 aaPredicted RBP13.31□□□□□ -0.28
PCDHGC3-207ENST00000622656 RGL2O15211 777 aa13.31□□□□□ -0.28
PCDHGC3-207ENST00000622656 ZEB1P37275 1124 aaPredicted RBP13.31□□□□□ -0.28
PCDHGC3-207ENST00000622656 ERFEQ4G0M1 354 aa13.31□□□□□ -0.28
PCDHGC3-207ENST00000622656 SUSD4Q5VX71 490 aa13.31□□□□□ -0.28
PCDHGC3-207ENST00000622656 STYK1Q6J9G0 422 aa13.31□□□□□ -0.28
PCDHGC3-207ENST00000622656 TPTE2Q6XPS3 522 aa13.31□□□□□ -0.28
PCDHGC3-207ENST00000622656 ZNF34Q8IZ26 560 aa13.31□□□□□ -0.28
PCDHGC3-207ENST00000622656 C7orf43Q8WVR3 580 aa13.31□□□□□ -0.28
PCDHGC3-207ENST00000622656 MASTLQ96GX5 879 aa13.31□□□□□ -0.28
PCDHGC3-207ENST00000622656 ERBB4Q15303 1308 aa13.31□□□□□ -0.28
PCDHGC3-207ENST00000622656 TAF1P21675 1872 aa13.3□□□□□ -0.28
PCDHGC3-207ENST00000622656 ZNF316A6NFI3 1004 aaPredicted RBP13.3□□□□□ -0.28
PCDHGC3-207ENST00000622656 GIGYF2Q6Y7W6 1299 aaKnown RBP13.3□□□□□ -0.28
PCDHGC3-207ENST00000622656 KIF6Q6ZMV9 814 aa13.3□□□□□ -0.28
PCDHGC3-207ENST00000622656 C3orf67Q6ZVT6 689 aa13.3□□□□□ -0.28
PCDHGC3-207ENST00000622656 ZNF428Q96B54 188 aa13.3□□□□□ -0.28
PCDHGC3-207ENST00000622656 ZNF853P0CG23 659 aa13.29□□□□□ -0.28
PCDHGC3-207ENST00000622656 LMNB1P20700 586 aa13.29□□□□□ -0.28
PCDHGC3-207ENST00000622656 AIMP1Q12904 312 aaKnown RBP13.29□□□□□ -0.28
PCDHGC3-207ENST00000622656 COPS6Q7L5N1 327 aa13.29□□□□□ -0.28
PCDHGC3-207ENST00000622656 XAGE3Q8WTP9 111 aa13.29□□□□□ -0.28
PCDHGC3-207ENST00000622656 CNKSR1Q969H4 720 aa13.29□□□□□ -0.28
PCDHGC3-207ENST00000622656 MBIPQ9NS73 344 aa13.29□□□□□ -0.28
PCDHGC3-207ENST00000622656 PDZRN3Q9UPQ7 1066 aa13.29□□□□□ -0.28
PCDHGC3-207ENST00000622656 NTSR2O95665 410 aa13.28□□□□□ -0.28
PCDHGC3-207ENST00000622656 NPR1P16066 1061 aa13.28□□□□□ -0.28
PCDHGC3-207ENST00000622656 CFAP44Q96MT7 982 aa13.28□□□□□ -0.28
PCDHGC3-207ENST00000622656 RRAGCQ9HB90 399 aa13.28□□□□□ -0.28
PCDHGC3-207ENST00000622656 CHPF2Q9P2E5 772 aa13.28□□□□□ -0.28
PCDHGC3-207ENST00000622656 GTF2E1P29083 439 aaPredicted RBP13.27□□□□□ -0.29
PCDHGC3-207ENST00000622656 SYNE4Q8N205 404 aa13.27□□□□□ -0.29
PCDHGC3-207ENST00000622656 DDX21Q9NR30 783 aaKnown RBP eCLIP13.27□□□□□ -0.29
PCDHGC3-207ENST00000622656 ELL2O00472 640 aaPredicted RBP13.26□□□□□ -0.29
PCDHGC3-207ENST00000622656 CRY2Q49AN0 593 aa13.26□□□□□ -0.29
PCDHGC3-207ENST00000622656 HDGFL1Q5TGJ6 251 aa13.26□□□□□ -0.29
PCDHGC3-207ENST00000622656 DUSP27Q5VZP5 1158 aa13.26□□□□□ -0.29
PCDHGC3-207ENST00000622656 SNED1Q8TER0 1413 aa13.26□□□□□ -0.29
PCDHGC3-207ENST00000622656 DDX60Q8IY21 1712 aaKnown RBP13.25□□□□□ -0.29
PCDHGC3-207ENST00000622656 RIC1Q4ADV7 1423 aa13.25□□□□□ -0.29
PCDHGC3-207ENST00000622656 IBTKQ9P2D0 1353 aaPredicted RBP13.25□□□□□ -0.29
PCDHGC3-207ENST00000622656 LTBP3Q9NS15 1303 aa13.25□□□□□ -0.29
PCDHGC3-207ENST00000622656 GLTPD2A6NH11 291 aa13.25□□□□□ -0.29
PCDHGC3-207ENST00000622656 POTECB2RU33 542 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms