RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 PLEKHO1Q53GL0 409 aaPredicted RBP3.36□□□□□ -1.87
CPNE3-211ENST00000621526 PRR5LQ6MZQ0 368 aa3.36□□□□□ -1.87
CPNE3-211ENST00000621526 VSIG10Q8N0Z9 540 aa3.36□□□□□ -1.87
CPNE3-211ENST00000621526 NFATC2IPQ8NCF5 419 aa3.36□□□□□ -1.87
CPNE3-211ENST00000621526 ZNF296Q8WUU4 475 aaPredicted RBP3.36□□□□□ -1.87
CPNE3-211ENST00000621526 SETDB2Q96T68 719 aa3.36□□□□□ -1.87
CPNE3-211ENST00000621526 PRDM6Q9NQX0 595 aa3.36□□□□□ -1.87
CPNE3-211ENST00000621526 ZNF277Q9NRM2 450 aaPredicted RBP3.36□□□□□ -1.87
CPNE3-211ENST00000621526 GPRC5DQ9NZD1 345 aa3.36□□□□□ -1.87
CPNE3-211ENST00000621526 SOS1Q07889 1333 aaPredicted RBP3.36□□□□□ -1.87
CPNE3-211ENST00000621526 WASHC2AQ641Q2 1341 aa3.36□□□□□ -1.87
CPNE3-211ENST00000621526 ZNF541Q9H0D2 1346 aa3.36□□□□□ -1.87
CPNE3-211ENST00000621526 USP54Q70EL1 1684 aa3.36□□□□□ -1.87
CPNE3-211ENST00000621526 ST20-MTHFSA0A0A6YYL1 179 aa3.35□□□□□ -1.87
CPNE3-211ENST00000621526 GPR25O00155 361 aa3.35□□□□□ -1.87
CPNE3-211ENST00000621526 RGL2O15211 777 aa3.35□□□□□ -1.87
CPNE3-211ENST00000621526 MTHFSP49914 203 aa3.35□□□□□ -1.87
CPNE3-211ENST00000621526 ZNF157P51786 506 aaPredicted RBP3.35□□□□□ -1.87
CPNE3-211ENST00000621526 FKBP1BP68106 108 aa3.35□□□□□ -1.87
CPNE3-211ENST00000621526 RRS1Q15050 365 aaKnown RBP3.35□□□□□ -1.87
CPNE3-211ENST00000621526 CLEC4GQ6UXB4 293 aa3.35□□□□□ -1.87
CPNE3-211ENST00000621526 TPTE2Q6XPS3 522 aa3.35□□□□□ -1.87
CPNE3-211ENST00000621526 PPARGC1BQ86YN6 1023 aaKnown RBP3.35□□□□□ -1.87
CPNE3-211ENST00000621526 EYA1Q99502 592 aa3.35□□□□□ -1.87
CPNE3-211ENST00000621526 COL25A1Q9BXS0 654 aaPredicted RBP3.35□□□□□ -1.87
CPNE3-211ENST00000621526 TEX13AQ9BXU3 409 aaPredicted RBP3.35□□□□□ -1.87
CPNE3-211ENST00000621526 GLIS2Q9BZE0 524 aaPredicted RBP3.35□□□□□ -1.87
CPNE3-211ENST00000621526 PRO3102Q9H379 93 aa3.35□□□□□ -1.87
CPNE3-211ENST00000621526 GJA3Q9Y6H8 435 aa3.35□□□□□ -1.87
CPNE3-211ENST00000621526 C4AP0C0L4 1744 aa3.35□□□□□ -1.87
CPNE3-211ENST00000621526 KIAA1551Q9HCM1 1747 aa3.35□□□□□ -1.87
CPNE3-211ENST00000621526 VIRMAQ69YN4 1812 aaKnown RBP3.35□□□□□ -1.87
CPNE3-211ENST00000621526 PIK3C2AO00443 1686 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 POTEFA5A3E0 1075 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 H0YGN5 161 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 H7C1D1 291 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 FKTNO75072 461 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 STARD3NLO95772 234 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 ALDH1A1P00352 501 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 SLC10A3P09131 477 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 EN2P19622 333 aaPredicted RBP3.34□□□□□ -1.87
CPNE3-211ENST00000621526 HIRAP54198 1017 aaPredicted RBP3.34□□□□□ -1.87
CPNE3-211ENST00000621526 INHBEP58166 350 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 ST5P78524 1137 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 TNIP1Q15025 636 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 TBC1D9BQ66K14 1250 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 USP48Q86UV5 1035 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 DNAJC10Q8IXB1 793 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 CNBD1Q8NA66 436 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 DPF2Q92785 391 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 ARMC5Q96C12 935 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 TMEM106CQ9BVX2 250 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 GBA2Q9HCG7 927 aaPredicted RBP3.34□□□□□ -1.87
CPNE3-211ENST00000621526 RBM27Q9P2N5 1060 aaKnown RBP3.34□□□□□ -1.87
CPNE3-211ENST00000621526 ZNRF3Q9ULT6 936 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 STXBP5LQ9Y2K9 1186 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 TUBGCP6Q96RT7 1819 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 ARFGEF1Q9Y6D6 1849 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 CDHR2Q9BYE9 1310 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 SBF1O95248 1867 aa3.34□□□□□ -1.87
CPNE3-211ENST00000621526 A0A1W2PP64 1363 aa3.34□□□□□ -1.88
CPNE3-211ENST00000621526 C5P01031 1676 aa3.33□□□□□ -1.88
CPNE3-211ENST00000621526 QRICH2Q9H0J4 1663 aa3.33□□□□□ -1.88
CPNE3-211ENST00000621526 N4BP2Q86UW6 1770 aaPredicted RBP3.33□□□□□ -1.88
CPNE3-211ENST00000621526 WNK3Q9BYP7 1800 aa3.33□□□□□ -1.88
CPNE3-211ENST00000621526 UBR3Q6ZT12 1888 aa3.33□□□□□ -1.88
CPNE3-211ENST00000621526 TBC1D8O95759 1140 aa3.33□□□□□ -1.88
CPNE3-211ENST00000621526 CAPN2P17655 700 aa3.33□□□□□ -1.88
CPNE3-211ENST00000621526 HOXA10P31260 410 aaPredicted RBP3.33□□□□□ -1.88
CPNE3-211ENST00000621526 IL6STP40189 918 aaPredicted RBP3.33□□□□□ -1.88
CPNE3-211ENST00000621526 CXCL9Q07325 125 aa3.33□□□□□ -1.88
CPNE3-211ENST00000621526 NBPF11Q86T75 865 aa3.33□□□□□ -1.88
CPNE3-211ENST00000621526 LARGE2Q8N3Y3 721 aa3.33□□□□□ -1.88
CPNE3-211ENST00000621526 NECTIN2Q92692 538 aa3.33□□□□□ -1.88
CPNE3-211ENST00000621526 ZNF408Q9H9D4 720 aa3.33□□□□□ -1.88
CPNE3-211ENST00000621526 CNOT7Q9UIV1 285 aaKnown RBP3.33□□□□□ -1.88
CPNE3-211ENST00000621526 PTPN22Q9Y2R2 807 aa3.33□□□□□ -1.88
CPNE3-211ENST00000621526 FLT4P35916 1363 aa3.33□□□□□ -1.88
CPNE3-211ENST00000621526 SZT2Q5T011 3432 aa3.32□□□□□ -1.88
CPNE3-211ENST00000621526 NPHP1O15259 732 aa3.32□□□□□ -1.88
CPNE3-211ENST00000621526 CANXP27824 592 aaKnown RBP3.32□□□□□ -1.88
CPNE3-211ENST00000621526 ARHGEF6Q15052 776 aa3.32□□□□□ -1.88
CPNE3-211ENST00000621526 CRY2Q49AN0 593 aa3.32□□□□□ -1.88
CPNE3-211ENST00000621526 C1orf141Q5JVX7 400 aa3.32□□□□□ -1.88
CPNE3-211ENST00000621526 CHRDL2Q6WN34 429 aa3.32□□□□□ -1.88
CPNE3-211ENST00000621526 KRT26Q7Z3Y9 468 aa3.32□□□□□ -1.88
CPNE3-211ENST00000621526 NPM2Q86SE8 214 aaKnown RBP3.32□□□□□ -1.88
CPNE3-211ENST00000621526 NIM1KQ8IY84 436 aa3.32□□□□□ -1.88
CPNE3-211ENST00000621526 SUPT20HQ8NEM7 779 aa3.32□□□□□ -1.88
CPNE3-211ENST00000621526 L3MBTL2Q969R5 705 aa3.32□□□□□ -1.88
CPNE3-211ENST00000621526 DCPSQ96C86 337 aaKnown RBP3.32□□□□□ -1.88
CPNE3-211ENST00000621526 RTFDC1Q9BY42 306 aaPredicted RBP3.32□□□□□ -1.88
CPNE3-211ENST00000621526 TMX4Q9H1E5 349 aaPredicted RBP3.32□□□□□ -1.88
CPNE3-211ENST00000621526 GGNBP2Q9H3C7 697 aa3.32□□□□□ -1.88
CPNE3-211ENST00000621526 ZBTB1Q9Y2K1 713 aa3.32□□□□□ -1.88
CPNE3-211ENST00000621526 ARIH1Q9Y4X5 557 aaPredicted RBP3.32□□□□□ -1.88
CPNE3-211ENST00000621526 NR2E3Q9Y5X4 410 aa3.32□□□□□ -1.88
CPNE3-211ENST00000621526 CARMIL3Q8ND23 1372 aa3.32□□□□□ -1.88
CPNE3-211ENST00000621526 NCAPD2Q15021 1401 aa3.32□□□□□ -1.88
CPNE3-211ENST00000621526 PKD1L3Q7Z443 1732 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms