RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 A0A087WZG4 1122 aa17.33■□□□□ 0.36
MUC1-229ENST00000620770 DZIP3Q86Y13 1208 aaKnown RBP17.33■□□□□ 0.36
MUC1-229ENST00000620770 XAGE3Q8WTP9 111 aa17.33■□□□□ 0.36
MUC1-229ENST00000620770 CHMP4AQ9BY43 222 aa17.33■□□□□ 0.36
MUC1-229ENST00000620770 ZPR1O75312 459 aa17.32■□□□□ 0.36
MUC1-229ENST00000620770 KIF6Q6ZMV9 814 aa17.32■□□□□ 0.36
MUC1-229ENST00000620770 TTLL7Q6ZT98 887 aa17.32■□□□□ 0.36
MUC1-229ENST00000620770 BCL2L13Q9BXK5 485 aa17.32■□□□□ 0.36
MUC1-229ENST00000620770 USP42Q9H9J4 1324 aaKnown RBP17.31■□□□□ 0.36
MUC1-229ENST00000620770 GRIN3BO60391 1043 aa17.31■□□□□ 0.36
MUC1-229ENST00000620770 SLC4A2P04920 1241 aa17.31■□□□□ 0.36
MUC1-229ENST00000620770 USPL1Q5W0Q7 1092 aa17.31■□□□□ 0.36
MUC1-229ENST00000620770 COPS6Q7L5N1 327 aa17.31■□□□□ 0.36
MUC1-229ENST00000620770 ZNF784Q8NCA9 323 aaPredicted RBP17.31■□□□□ 0.36
MUC1-229ENST00000620770 PHAXQ9H814 394 aaKnown RBP17.31■□□□□ 0.36
MUC1-229ENST00000620770 HYPKQ9NX55 129 aa17.31■□□□□ 0.36
MUC1-229ENST00000620770 LRP10Q7Z4F1 713 aa17.3■□□□□ 0.36
MUC1-229ENST00000620770 ZBTB3Q9H5J0 574 aa17.3■□□□□ 0.36
MUC1-229ENST00000620770 NARFQ9UHQ1 456 aa17.3■□□□□ 0.36
MUC1-229ENST00000620770 CT47B1P0C2W7 299 aaPredicted RBP17.29■□□□□ 0.36
MUC1-229ENST00000620770 YBX3P16989 372 aaKnown RBP eCLIP17.29■□□□□ 0.36
MUC1-229ENST00000620770 G2E3Q7L622 706 aa17.29■□□□□ 0.36
MUC1-229ENST00000620770 SSH1Q8WYL5 1049 aa17.29■□□□□ 0.36
MUC1-229ENST00000620770 SMC4Q9NTJ3 1288 aa17.29■□□□□ 0.36
MUC1-229ENST00000620770 SCN7AQ01118 1682 aa17.29■□□□□ 0.36
MUC1-229ENST00000620770 CAMTA2O94983 1202 aa17.28■□□□□ 0.36
MUC1-229ENST00000620770 KIAA1551Q9HCM1 1747 aa17.27■□□□□ 0.36
MUC1-229ENST00000620770 MMP10P09238 476 aa17.27■□□□□ 0.36
MUC1-229ENST00000620770 GYS1P13807 737 aa17.27■□□□□ 0.36
MUC1-229ENST00000620770 FKBP8Q14318 412 aa17.27■□□□□ 0.36
MUC1-229ENST00000620770 NLGN1Q8N2Q7 840 aa17.27■□□□□ 0.36
MUC1-229ENST00000620770 BCORQ6W2J9 1755 aa17.27■□□□□ 0.35
MUC1-229ENST00000620770 N4BP2Q86UW6 1770 aaPredicted RBP17.27■□□□□ 0.35
MUC1-229ENST00000620770 MAP3K15Q6ZN16 1313 aa17.26■□□□□ 0.35
MUC1-229ENST00000620770 RARSP54136 660 aaKnown RBP17.26■□□□□ 0.35
MUC1-229ENST00000620770 FLIIQ13045 1269 aa17.26■□□□□ 0.35
MUC1-229ENST00000620770 BICDL1Q6ZP65 573 aa17.26■□□□□ 0.35
MUC1-229ENST00000620770 MRPL50Q8N5N7 158 aaKnown RBP17.26■□□□□ 0.35
MUC1-229ENST00000620770 ZNF428Q96B54 188 aa17.26■□□□□ 0.35
MUC1-229ENST00000620770 C10orf71Q711Q0 1435 aa17.25■□□□□ 0.35
MUC1-229ENST00000620770 FKBP5Q13451 457 aaPredicted RBP17.25■□□□□ 0.35
MUC1-229ENST00000620770 HLFQ16534 295 aa17.25■□□□□ 0.35
MUC1-229ENST00000620770 ALDH1L2Q3SY69 923 aa17.25■□□□□ 0.35
MUC1-229ENST00000620770 BCL2L12Q9HB09 334 aa17.25■□□□□ 0.35
MUC1-229ENST00000620770 ZNF652Q9Y2D9 606 aa17.25■□□□□ 0.35
MUC1-229ENST00000620770 DDX58O95786 925 aaKnown RBP17.24■□□□□ 0.35
MUC1-229ENST00000620770 RIC3Q7Z5B4 369 aa17.24■□□□□ 0.35
MUC1-229ENST00000620770 BRCA1P38398 1863 aaKnown RBP17.24■□□□□ 0.35
MUC1-229ENST00000620770 ERVV-1B6SEH8 477 aa17.23■□□□□ 0.35
MUC1-229ENST00000620770 TBC1D9BQ66K14 1250 aa17.23■□□□□ 0.35
MUC1-229ENST00000620770 ANKRD13DQ6ZTN6 518 aa17.23■□□□□ 0.35
MUC1-229ENST00000620770 PLBD2Q8NHP8 589 aa17.23■□□□□ 0.35
MUC1-229ENST00000620770 PXDNLA1KZ92 1463 aa17.23■□□□□ 0.35
MUC1-229ENST00000620770 BCAR3O75815 825 aa17.22■□□□□ 0.35
MUC1-229ENST00000620770 GPTP24298 496 aa17.22■□□□□ 0.35
MUC1-229ENST00000620770 MAP3K2Q9Y2U5 619 aa17.22■□□□□ 0.35
MUC1-229ENST00000620770 PARP3Q9Y6F1 533 aa17.22■□□□□ 0.35
MUC1-229ENST00000620770 ADCY9O60503 1353 aa17.21■□□□□ 0.35
MUC1-229ENST00000620770 PI4KAP2A4QPH2 592 aa17.21■□□□□ 0.35
MUC1-229ENST00000620770 FAM177BA6PVY3 158 aa17.21■□□□□ 0.35
MUC1-229ENST00000620770 NFIXQ14938 502 aa17.21■□□□□ 0.35
MUC1-229ENST00000620770 PI4KAP1Q8N8J0 262 aa17.21■□□□□ 0.35
MUC1-229ENST00000620770 FRAT1Q92837 279 aaPredicted RBP17.21■□□□□ 0.35
MUC1-229ENST00000620770 NIP7Q9Y221 180 aaKnown RBP eCLIP17.21■□□□□ 0.35
MUC1-229ENST00000620770 ARFGEF2Q9Y6D5 1785 aa17.2■□□□□ 0.34
MUC1-229ENST00000620770 F6X3S4 739 aa17.2■□□□□ 0.34
MUC1-229ENST00000620770 KSR2Q6VAB6 950 aa17.2■□□□□ 0.34
MUC1-229ENST00000620770 GIGYF2Q6Y7W6 1299 aaKnown RBP17.2■□□□□ 0.34
MUC1-229ENST00000620770 MYD88Q99836 296 aa17.2■□□□□ 0.34
MUC1-229ENST00000620770 RCAN3Q9UKA8 241 aa17.2■□□□□ 0.34
MUC1-229ENST00000620770 WWC3Q9ULE0 1092 aa17.2■□□□□ 0.34
MUC1-229ENST00000620770 NOB1Q9ULX3 412 aaKnown RBP17.2■□□□□ 0.34
MUC1-229ENST00000620770 ARFGEF1Q9Y6D6 1849 aa17.19■□□□□ 0.34
MUC1-229ENST00000620770 ATP5J2-PTCD1G3V325 749 aa17.19■□□□□ 0.34
MUC1-229ENST00000620770 DDR1Q08345 913 aa17.19■□□□□ 0.34
MUC1-229ENST00000620770 CLEC4GQ6UXB4 293 aa17.19■□□□□ 0.34
MUC1-229ENST00000620770 ATP10DQ9P241 1426 aa17.19■□□□□ 0.34
MUC1-229ENST00000620770 KIF16BQ96L93 1317 aa17.19■□□□□ 0.34
MUC1-229ENST00000620770 NPHP1O15259 732 aa17.18■□□□□ 0.34
MUC1-229ENST00000620770 TGFB2P61812 414 aa17.18■□□□□ 0.34
MUC1-229ENST00000620770 TCIRG1Q13488 830 aa17.18■□□□□ 0.34
MUC1-229ENST00000620770 HSP90AB3PQ58FF7 597 aa17.18■□□□□ 0.34
MUC1-229ENST00000620770 SETDB2Q96T68 719 aa17.18■□□□□ 0.34
MUC1-229ENST00000620770 NUP98P52948 1817 aa17.18■□□□□ 0.34
MUC1-229ENST00000620770 AFDNP55196 1824 aaKnown RBP17.18■□□□□ 0.34
MUC1-229ENST00000620770 PTPRCP08575 1304 aa17.18■□□□□ 0.34
MUC1-229ENST00000620770 CARMIL3Q8ND23 1372 aa17.17■□□□□ 0.34
MUC1-229ENST00000620770 CACNA1FO60840 1977 aa17.17■□□□□ 0.34
MUC1-229ENST00000620770 TM4SF1P30408 202 aa17.17■□□□□ 0.34
MUC1-229ENST00000620770 SLC4A10Q6U841 1118 aa17.17■□□□□ 0.34
MUC1-229ENST00000620770 DNAAF4Q8WXU2 420 aa17.17■□□□□ 0.34
MUC1-229ENST00000620770 METTL22Q9BUU2 404 aaPredicted RBP17.17■□□□□ 0.34
MUC1-229ENST00000620770 UBN2Q6ZU65 1347 aa17.17■□□□□ 0.34
MUC1-229ENST00000620770 ANKRD36CQ5JPF3 1778 aa17.16■□□□□ 0.34
MUC1-229ENST00000620770 POLRMTO00411 1230 aaKnown RBP17.16■□□□□ 0.34
MUC1-229ENST00000620770 RGL2O15211 777 aa17.16■□□□□ 0.34
MUC1-229ENST00000620770 NEXNQ0ZGT2 675 aa17.16■□□□□ 0.34
MUC1-229ENST00000620770 SERPINB2P05120 415 aa17.15■□□□□ 0.34
MUC1-229ENST00000620770 NBPF5PQ86XG9 351 aaPredicted RBP17.15■□□□□ 0.34
MUC1-229ENST00000620770 ZNF34Q8IZ26 560 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms