RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 NBPF10Q6P3W6 841 aaKnown RBP21.14■□□□□ 0.97
CD40-207ENST00000620709 NBPF15Q8N660 670 aa21.14■□□□□ 0.97
CD40-207ENST00000620709 ZNF652Q9Y2D9 606 aa21.14■□□□□ 0.97
CD40-207ENST00000620709 BCORQ6W2J9 1755 aa21.13■□□□□ 0.97
CD40-207ENST00000620709 ANKRD31Q8N7Z5 1873 aa21.13■□□□□ 0.97
CD40-207ENST00000620709 FAM177BA6PVY3 158 aa21.13■□□□□ 0.97
CD40-207ENST00000620709 SBF1O95248 1867 aa21.12■□□□□ 0.97
CD40-207ENST00000620709 HSPA6P17066 643 aa21.12■□□□□ 0.97
CD40-207ENST00000620709 NBPF5PQ86XG9 351 aaPredicted RBP21.12■□□□□ 0.97
CD40-207ENST00000620709 C16orf71Q8IYS4 520 aaPredicted RBP21.12■□□□□ 0.97
CD40-207ENST00000620709 PDZRN3Q9UPQ7 1066 aa21.11■□□□□ 0.97
CD40-207ENST00000620709 KDM2BQ8NHM5 1336 aa21.11■□□□□ 0.97
CD40-207ENST00000620709 C21orf2O43822 256 aa21.1■□□□□ 0.97
CD40-207ENST00000620709 NIP7Q9Y221 180 aaKnown RBP eCLIP21.1■□□□□ 0.97
CD40-207ENST00000620709 RRP7AQ9Y3A4 280 aaKnown RBP21.1■□□□□ 0.97
CD40-207ENST00000620709 TOMM70O94826 608 aa21.09■□□□□ 0.97
CD40-207ENST00000620709 LMNB1P20700 586 aa21.09■□□□□ 0.97
CD40-207ENST00000620709 CLEC4GQ6UXB4 293 aa21.09■□□□□ 0.97
CD40-207ENST00000620709 COL11A2P13942 1736 aaPredicted RBP21.09■□□□□ 0.97
CD40-207ENST00000620709 RIPK4P57078 832 aa21.09■□□□□ 0.97
CD40-207ENST00000620709 RRAGCQ9HB90 399 aa21.09■□□□□ 0.97
CD40-207ENST00000620709 KDM3BQ7LBC6 1761 aa21.09■□□□□ 0.97
CD40-207ENST00000620709 LAMB4A4D0S4 1761 aa21.08■□□□□ 0.97
CD40-207ENST00000620709 MYL6BP14649 208 aa21.08■□□□□ 0.96
CD40-207ENST00000620709 EIF4A1P60842 406 aaKnown RBP21.08■□□□□ 0.96
CD40-207ENST00000620709 FAM9BQ8IZU0 186 aa21.08■□□□□ 0.96
CD40-207ENST00000620709 TSPYL4Q9UJ04 414 aa21.08■□□□□ 0.96
CD40-207ENST00000620709 CACNA1SQ13698 1873 aa21.07■□□□□ 0.96
CD40-207ENST00000620709 HLFQ16534 295 aa21.07■□□□□ 0.96
CD40-207ENST00000620709 CCDC146Q8IYE0 955 aa21.07■□□□□ 0.96
CD40-207ENST00000620709 CCDC88AQ3V6T2 1871 aa21.06■□□□□ 0.96
CD40-207ENST00000620709 NFKBIEO00221 500 aa21.06■□□□□ 0.96
CD40-207ENST00000620709 GTF2E1P29083 439 aaPredicted RBP21.06■□□□□ 0.96
CD40-207ENST00000620709 PRELPP51888 382 aa21.06■□□□□ 0.96
CD40-207ENST00000620709 NEUROD2Q15784 382 aa21.06■□□□□ 0.96
CD40-207ENST00000620709 TPTE2Q6XPS3 522 aa21.05■□□□□ 0.96
CD40-207ENST00000620709 KIF6Q6ZMV9 814 aa21.05■□□□□ 0.96
CD40-207ENST00000620709 CNKSR1Q969H4 720 aa21.05■□□□□ 0.96
CD40-207ENST00000620709 MASTLQ96GX5 879 aa21.05■□□□□ 0.96
CD40-207ENST00000620709 SRGNP10124 158 aa21.04■□□□□ 0.96
CD40-207ENST00000620709 STYK1Q6J9G0 422 aa21.04■□□□□ 0.96
CD40-207ENST00000620709 WDR43Q15061 677 aaKnown RBP eCLIP21.04■□□□□ 0.96
CD40-207ENST00000620709 PRPF40BQ6NWY9 871 aaKnown RBP21.04■□□□□ 0.96
CD40-207ENST00000620709 TMPOP42166 694 aaKnown RBP21.03■□□□□ 0.96
CD40-207ENST00000620709 TTLL7Q6ZT98 887 aa21.03■□□□□ 0.96
CD40-207ENST00000620709 EIF2S2P20042 333 aaKnown RBP21.02■□□□□ 0.96
CD40-207ENST00000620709 ZBTB3Q9H5J0 574 aa21.02■□□□□ 0.96
CD40-207ENST00000620709 SLX4Q8IY92 1834 aa21.02■□□□□ 0.95
CD40-207ENST00000620709 TIAM2Q8IVF5 1701 aa21.01■□□□□ 0.95
CD40-207ENST00000620709 LMOD3Q0VAK6 560 aa21.01■□□□□ 0.95
CD40-207ENST00000620709 RBM46Q8TBY0 533 aaKnown RBP21.01■□□□□ 0.95
CD40-207ENST00000620709 ZC3H4Q9UPT8 1303 aaKnown RBP21.01■□□□□ 0.95
CD40-207ENST00000620709 GPTP24298 496 aa21■□□□□ 0.95
CD40-207ENST00000620709 APLP1P51693 650 aa21■□□□□ 0.95
CD40-207ENST00000620709 ERFEQ4G0M1 354 aa21■□□□□ 0.95
CD40-207ENST00000620709 TAOK3Q9H2K8 898 aa21■□□□□ 0.95
CD40-207ENST00000620709 LAS1LQ9Y4W2 734 aaKnown RBP21■□□□□ 0.95
CD40-207ENST00000620709 MAP3K15Q6ZN16 1313 aa21■□□□□ 0.95
CD40-207ENST00000620709 TNRC6CQ9HCJ0 1690 aaKnown RBP21■□□□□ 0.95
CD40-207ENST00000620709 GLTPD2A6NH11 291 aa20.99■□□□□ 0.95
CD40-207ENST00000620709 NPR1P16066 1061 aa20.99■□□□□ 0.95
CD40-207ENST00000620709 RGL2O15211 777 aa20.99■□□□□ 0.95
CD40-207ENST00000620709 NUTM1Q86Y26 1132 aa20.99■□□□□ 0.95
CD40-207ENST00000620709 NECTIN2Q92692 538 aa20.99■□□□□ 0.95
CD40-207ENST00000620709 FER1L6Q2WGJ9 1857 aa20.98■□□□□ 0.95
CD40-207ENST00000620709 ERVV-1B6SEH8 477 aa20.98■□□□□ 0.95
CD40-207ENST00000620709 HNRNPUQ00839 825 aaKnown RBP eCLIP20.98■□□□□ 0.95
CD40-207ENST00000620709 SOGA3Q5TF21 947 aa20.98■□□□□ 0.95
CD40-207ENST00000620709 NYXQ9GZU5 481 aa20.98■□□□□ 0.95
CD40-207ENST00000620709 NUP98P52948 1817 aa20.98■□□□□ 0.95
CD40-207ENST00000620709 DPY19L2Q6NUT2 758 aa20.97■□□□□ 0.95
CD40-207ENST00000620709 RUNDC1Q96C34 613 aa20.97■□□□□ 0.95
CD40-207ENST00000620709 ANXA1P04083 346 aa20.96■□□□□ 0.95
CD40-207ENST00000620709 CCDC93Q567U6 631 aa20.96■□□□□ 0.95
CD40-207ENST00000620709 ARFGEF2Q9Y6D5 1785 aa20.95■□□□□ 0.94
CD40-207ENST00000620709 VEGFAP15692 232 aaPredicted RBP20.95■□□□□ 0.94
CD40-207ENST00000620709 FSTL1Q12841 308 aa20.95■□□□□ 0.94
CD40-207ENST00000620709 ADAMTS8Q9UP79 889 aa20.95■□□□□ 0.94
CD40-207ENST00000620709 OLFM4Q6UX06 510 aa20.94■□□□□ 0.94
CD40-207ENST00000620709 ERBB4Q15303 1308 aa20.94■□□□□ 0.94
CD40-207ENST00000620709 BABAM1Q9NWV8 329 aa20.94■□□□□ 0.94
CD40-207ENST00000620709 LTBP3Q9NS15 1303 aa20.93■□□□□ 0.94
CD40-207ENST00000620709 ABCC12Q96J65 1359 aa20.93■□□□□ 0.94
CD40-207ENST00000620709 DICER1Q9UPY3 1922 aaKnown RBP20.93■□□□□ 0.94
CD40-207ENST00000620709 KLRG2A4D1S0 409 aaPredicted RBP20.93■□□□□ 0.94
CD40-207ENST00000620709 ALDH1B1P30837 517 aa20.93■□□□□ 0.94
CD40-207ENST00000620709 HTRA3P83110 453 aa20.93■□□□□ 0.94
CD40-207ENST00000620709 AIMP1Q12904 312 aaKnown RBP20.93■□□□□ 0.94
CD40-207ENST00000620709 PROSER3Q2NL68 480 aa20.93■□□□□ 0.94
CD40-207ENST00000620709 SUSD4Q5VX71 490 aa20.93■□□□□ 0.94
CD40-207ENST00000620709 SMC1BQ8NDV3 1235 aa20.93■□□□□ 0.94
CD40-207ENST00000620709 UBN2Q6ZU65 1347 aa20.93■□□□□ 0.94
CD40-207ENST00000620709 RPGRQ92834 1020 aaKnown RBP20.92■□□□□ 0.94
CD40-207ENST00000620709 PDIA6Q15084 440 aa20.91■□□□□ 0.94
CD40-207ENST00000620709 KRT24Q2M2I5 525 aa20.91■□□□□ 0.94
CD40-207ENST00000620709 GIGYF2Q6Y7W6 1299 aaKnown RBP20.91■□□□□ 0.94
CD40-207ENST00000620709 C7orf43Q8WVR3 580 aa20.91■□□□□ 0.94
CD40-207ENST00000620709 ZNF277Q9NRM2 450 aaPredicted RBP20.91■□□□□ 0.94
CD40-207ENST00000620709 TRIM35Q9UPQ4 493 aa20.91■□□□□ 0.94
CD40-207ENST00000620709 DDNO94850 711 aaPredicted RBP20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms