RNA–Protein interactions for RNA: ENST00000620580.1

LINC00649-218, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 779 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-218ENST00000620580 RRP7AQ9Y3A4 280 aaKnown RBP15.03■□□□□ -0
LINC00649-218ENST00000620580 C21orf2O43822 256 aa15.02■□□□□ -0
LINC00649-218ENST00000620580 ST5P78524 1137 aa15.02■□□□□ -0
LINC00649-218ENST00000620580 NBPF5PQ86XG9 351 aaPredicted RBP15.02■□□□□ -0
LINC00649-218ENST00000620580 CCDC146Q8IYE0 955 aa15.02■□□□□ -0
LINC00649-218ENST00000620580 PNNQ9H307 717 aaKnown RBP15.02■□□□□ -0
LINC00649-218ENST00000620580 RRAGCQ9HB90 399 aa15.02■□□□□ -0
LINC00649-218ENST00000620580 NIP7Q9Y221 180 aaKnown RBP eCLIP15.02■□□□□ -0
LINC00649-218ENST00000620580 COL11A2P13942 1736 aaPredicted RBP15.02□□□□□ -0.01
LINC00649-218ENST00000620580 KDM3BQ7LBC6 1761 aa15.01□□□□□ -0.01
LINC00649-218ENST00000620580 TOMM70O94826 608 aa15.01□□□□□ -0.01
LINC00649-218ENST00000620580 LMNB1P20700 586 aa15.01□□□□□ -0.01
LINC00649-218ENST00000620580 TTLL7Q6ZT98 887 aa15.01□□□□□ -0.01
LINC00649-218ENST00000620580 ZNF652Q9Y2D9 606 aa15.01□□□□□ -0.01
LINC00649-218ENST00000620580 MYBBP1AQ9BQG0 1328 aaKnown RBP15□□□□□ -0.01
LINC00649-218ENST00000620580 CCDC88AQ3V6T2 1871 aa15□□□□□ -0.01
LINC00649-218ENST00000620580 SRGNP10124 158 aa15□□□□□ -0.01
LINC00649-218ENST00000620580 MYL6BP14649 208 aa15□□□□□ -0.01
LINC00649-218ENST00000620580 TMPOP42166 694 aaKnown RBP15□□□□□ -0.01
LINC00649-218ENST00000620580 TSPYL4Q9UJ04 414 aa15□□□□□ -0.01
LINC00649-218ENST00000620580 PDZRN3Q9UPQ7 1066 aa15□□□□□ -0.01
LINC00649-218ENST00000620580 SLX4Q8IY92 1834 aa15□□□□□ -0.01
LINC00649-218ENST00000620580 NEUROD2Q15784 382 aa14.99□□□□□ -0.01
LINC00649-218ENST00000620580 KDM2BQ8NHM5 1336 aa14.98□□□□□ -0.01
LINC00649-218ENST00000620580 STYK1Q6J9G0 422 aa14.98□□□□□ -0.01
LINC00649-218ENST00000620580 PRPF40BQ6NWY9 871 aaKnown RBP14.98□□□□□ -0.01
LINC00649-218ENST00000620580 TPTE2Q6XPS3 522 aa14.98□□□□□ -0.01
LINC00649-218ENST00000620580 CNKSR1Q969H4 720 aa14.98□□□□□ -0.01
LINC00649-218ENST00000620580 MASTLQ96GX5 879 aa14.98□□□□□ -0.01
LINC00649-218ENST00000620580 LAMB4A4D0S4 1761 aa14.98□□□□□ -0.01
LINC00649-218ENST00000620580 ANXA1P04083 346 aa14.97□□□□□ -0.01
LINC00649-218ENST00000620580 EIF2S2P20042 333 aaKnown RBP14.97□□□□□ -0.01
LINC00649-218ENST00000620580 OLFM4Q6UX06 510 aa14.97□□□□□ -0.01
LINC00649-218ENST00000620580 NUTM1Q86Y26 1132 aa14.97□□□□□ -0.01
LINC00649-218ENST00000620580 ZBTB3Q9H5J0 574 aa14.97□□□□□ -0.01
LINC00649-218ENST00000620580 MAP3K15Q6ZN16 1313 aa14.96□□□□□ -0.01
LINC00649-218ENST00000620580 KLRG2A4D1S0 409 aaPredicted RBP14.96□□□□□ -0.01
LINC00649-218ENST00000620580 GLTPD2A6NH11 291 aa14.96□□□□□ -0.01
LINC00649-218ENST00000620580 GPTP24298 496 aa14.96□□□□□ -0.01
LINC00649-218ENST00000620580 CACNA1SQ13698 1873 aa14.96□□□□□ -0.01
LINC00649-218ENST00000620580 PROSER3Q2NL68 480 aa14.96□□□□□ -0.01
LINC00649-218ENST00000620580 C16orf71Q8IYS4 520 aaPredicted RBP14.96□□□□□ -0.01
LINC00649-218ENST00000620580 RBM46Q8TBY0 533 aaKnown RBP14.96□□□□□ -0.01
LINC00649-218ENST00000620580 C7orf43Q8WVR3 580 aa14.96□□□□□ -0.01
LINC00649-218ENST00000620580 ADAMTS8Q9UP79 889 aa14.96□□□□□ -0.01
LINC00649-218ENST00000620580 FER1L6Q2WGJ9 1857 aa14.95□□□□□ -0.02
LINC00649-218ENST00000620580 ERVV-1B6SEH8 477 aa14.95□□□□□ -0.02
LINC00649-218ENST00000620580 RGL2O15211 777 aa14.95□□□□□ -0.02
LINC00649-218ENST00000620580 NPR1P16066 1061 aa14.95□□□□□ -0.02
LINC00649-218ENST00000620580 GTF2E1P29083 439 aaPredicted RBP14.95□□□□□ -0.02
LINC00649-218ENST00000620580 PDIA6Q15084 440 aa14.95□□□□□ -0.02
LINC00649-218ENST00000620580 KRT24Q2M2I5 525 aa14.95□□□□□ -0.02
LINC00649-218ENST00000620580 NECTIN2Q92692 538 aa14.95□□□□□ -0.02
LINC00649-218ENST00000620580 TRIM35Q9UPQ4 493 aa14.95□□□□□ -0.02
LINC00649-218ENST00000620580 ZC3H4Q9UPT8 1303 aaKnown RBP14.94□□□□□ -0.02
LINC00649-218ENST00000620580 NUP98P52948 1817 aa14.94□□□□□ -0.02
LINC00649-218ENST00000620580 HTRA3P83110 453 aa14.94□□□□□ -0.02
LINC00649-218ENST00000620580 ERFEQ4G0M1 354 aa14.94□□□□□ -0.02
LINC00649-218ENST00000620580 KIF6Q6ZMV9 814 aa14.94□□□□□ -0.02
LINC00649-218ENST00000620580 LRP10Q7Z4F1 713 aa14.94□□□□□ -0.02
LINC00649-218ENST00000620580 TAOK3Q9H2K8 898 aa14.94□□□□□ -0.02
LINC00649-218ENST00000620580 PRKRIP1Q9H875 184 aaPredicted RBP14.94□□□□□ -0.02
LINC00649-218ENST00000620580 ABCC12Q96J65 1359 aa14.94□□□□□ -0.02
LINC00649-218ENST00000620580 UBN2Q6ZU65 1347 aa14.93□□□□□ -0.02
LINC00649-218ENST00000620580 POTECB2RU33 542 aa14.93□□□□□ -0.02
LINC00649-218ENST00000620580 WDR43Q15061 677 aaKnown RBP eCLIP14.93□□□□□ -0.02
LINC00649-218ENST00000620580 SUSD4Q5VX71 490 aa14.93□□□□□ -0.02
LINC00649-218ENST00000620580 RUNDC1Q96C34 613 aa14.93□□□□□ -0.02
LINC00649-218ENST00000620580 LAS1LQ9Y4W2 734 aaKnown RBP14.93□□□□□ -0.02
LINC00649-218ENST00000620580 APLP1P51693 650 aa14.92□□□□□ -0.02
LINC00649-218ENST00000620580 LMOD3Q0VAK6 560 aa14.92□□□□□ -0.02
LINC00649-218ENST00000620580 ZNF34Q8IZ26 560 aa14.92□□□□□ -0.02
LINC00649-218ENST00000620580 TIAM2Q8IVF5 1701 aa14.92□□□□□ -0.02
LINC00649-218ENST00000620580 LTBP3Q9NS15 1303 aa14.92□□□□□ -0.02
LINC00649-218ENST00000620580 CHL1O00533 1208 aa14.91□□□□□ -0.02
LINC00649-218ENST00000620580 VEGFAP15692 232 aaPredicted RBP14.91□□□□□ -0.02
LINC00649-218ENST00000620580 GIGYF2Q6Y7W6 1299 aaKnown RBP14.91□□□□□ -0.02
LINC00649-218ENST00000620580 C3orf67Q6ZVT6 689 aa14.91□□□□□ -0.02
LINC00649-218ENST00000620580 SLC51AQ86UW1 340 aa14.91□□□□□ -0.02
LINC00649-218ENST00000620580 BABAM1Q9NWV8 329 aa14.91□□□□□ -0.02
LINC00649-218ENST00000620580 ERBB4Q15303 1308 aa14.91□□□□□ -0.02
LINC00649-218ENST00000620580 TNRC6CQ9HCJ0 1690 aaKnown RBP14.9□□□□□ -0.02
LINC00649-218ENST00000620580 DICER1Q9UPY3 1922 aaKnown RBP14.9□□□□□ -0.02
LINC00649-218ENST00000620580 ZNF316A6NFI3 1004 aaPredicted RBP14.9□□□□□ -0.02
LINC00649-218ENST00000620580 AIMP1Q12904 312 aaKnown RBP14.9□□□□□ -0.02
LINC00649-218ENST00000620580 CCDC93Q567U6 631 aa14.9□□□□□ -0.02
LINC00649-218ENST00000620580 DNAJC5GQ8N7S2 189 aa14.9□□□□□ -0.02
LINC00649-218ENST00000620580 NYXQ9GZU5 481 aa14.9□□□□□ -0.02
LINC00649-218ENST00000620580 ZNF277Q9NRM2 450 aaPredicted RBP14.9□□□□□ -0.02
LINC00649-218ENST00000620580 ARFGEF2Q9Y6D5 1785 aa14.9□□□□□ -0.02
LINC00649-218ENST00000620580 DDNO94850 711 aaPredicted RBP14.89□□□□□ -0.03
LINC00649-218ENST00000620580 NTSR2O95665 410 aa14.89□□□□□ -0.03
LINC00649-218ENST00000620580 FSTL1Q12841 308 aa14.89□□□□□ -0.03
LINC00649-218ENST00000620580 CRY2Q49AN0 593 aa14.89□□□□□ -0.03
LINC00649-218ENST00000620580 SOGA3Q5TF21 947 aa14.89□□□□□ -0.03
LINC00649-218ENST00000620580 DPY19L2Q6NUT2 758 aa14.89□□□□□ -0.03
LINC00649-218ENST00000620580 COPS6Q7L5N1 327 aa14.89□□□□□ -0.03
LINC00649-218ENST00000620580 XAGE3Q8WTP9 111 aa14.89□□□□□ -0.03
LINC00649-218ENST00000620580 ZNF428Q96B54 188 aa14.89□□□□□ -0.03
LINC00649-218ENST00000620580 ALDH1B1P30837 517 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms