RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 NPM2Q86SE8 214 aaKnown RBP20.95■□□□□ 0.94
BRCA1-228ENST00000618469 TRIM35Q9UPQ4 493 aa20.95■□□□□ 0.94
BRCA1-228ENST00000618469 AFDNP55196 1824 aaKnown RBP20.94■□□□□ 0.94
BRCA1-228ENST00000618469 APAF1O14727 1248 aa20.93■□□□□ 0.94
BRCA1-228ENST00000618469 SMC1BQ8NDV3 1235 aa20.93■□□□□ 0.94
BRCA1-228ENST00000618469 BCL2L12Q9HB09 334 aa20.93■□□□□ 0.94
BRCA1-228ENST00000618469 NRXN2Q9P2S2 1712 aa20.92■□□□□ 0.94
BRCA1-228ENST00000618469 POLRMTO00411 1230 aaKnown RBP20.92■□□□□ 0.94
BRCA1-228ENST00000618469 PRELPP51888 382 aa20.92■□□□□ 0.94
BRCA1-228ENST00000618469 TBC1D2BQ9UPU7 963 aa20.92■□□□□ 0.94
BRCA1-228ENST00000618469 NFIXQ14938 502 aa20.91■□□□□ 0.94
BRCA1-228ENST00000618469 BABAM1Q9NWV8 329 aa20.91■□□□□ 0.94
BRCA1-228ENST00000618469 LAS1LQ9Y4W2 734 aaKnown RBP20.91■□□□□ 0.94
BRCA1-228ENST00000618469 NBPF26B4DH59 902 aa20.9■□□□□ 0.94
BRCA1-228ENST00000618469 HSPA1AP0DMV8 641 aaKnown RBP20.9■□□□□ 0.94
BRCA1-228ENST00000618469 HSPA1BP0DMV9 641 aaKnown RBP20.9■□□□□ 0.94
BRCA1-228ENST00000618469 NBPF10Q6P3W6 841 aaKnown RBP20.9■□□□□ 0.94
BRCA1-228ENST00000618469 DZIP3Q86Y13 1208 aaKnown RBP20.9■□□□□ 0.94
BRCA1-228ENST00000618469 NBPF15Q8N660 670 aa20.9■□□□□ 0.94
BRCA1-228ENST00000618469 TM4SF1P30408 202 aa20.89■□□□□ 0.93
BRCA1-228ENST00000618469 CAMTA2O94983 1202 aa20.88■□□□□ 0.93
BRCA1-228ENST00000618469 BICDL1Q6ZP65 573 aa20.88■□□□□ 0.93
BRCA1-228ENST00000618469 TBC1D9BQ66K14 1250 aa20.86■□□□□ 0.93
BRCA1-228ENST00000618469 CARMIL3Q8ND23 1372 aa20.85■□□□□ 0.93
BRCA1-228ENST00000618469 TIAM2Q8IVF5 1701 aa20.85■□□□□ 0.93
BRCA1-228ENST00000618469 CHL1O00533 1208 aa20.85■□□□□ 0.93
BRCA1-228ENST00000618469 VEGFAP15692 232 aaPredicted RBP20.85■□□□□ 0.93
BRCA1-228ENST00000618469 ZNF219Q9P2Y4 722 aaPredicted RBP20.85■□□□□ 0.93
BRCA1-228ENST00000618469 GLTPD2A6NH11 291 aa20.84■□□□□ 0.93
BRCA1-228ENST00000618469 SERPINB2P05120 415 aa20.84■□□□□ 0.93
BRCA1-228ENST00000618469 LMNB1P20700 586 aa20.84■□□□□ 0.93
BRCA1-228ENST00000618469 KRT24Q2M2I5 525 aa20.84■□□□□ 0.93
BRCA1-228ENST00000618469 ERBB4Q15303 1308 aa20.83■□□□□ 0.93
BRCA1-228ENST00000618469 DLEC1Q9Y238 1755 aa20.83■□□□□ 0.93
BRCA1-228ENST00000618469 MYL6BP14649 208 aa20.83■□□□□ 0.93
BRCA1-228ENST00000618469 CALD1Q05682 793 aaKnown RBP20.83■□□□□ 0.93
BRCA1-228ENST00000618469 NGEFQ8N5V2 710 aa20.83■□□□□ 0.93
BRCA1-228ENST00000618469 CFAP44Q96MT7 982 aa20.83■□□□□ 0.93
BRCA1-228ENST00000618469 ZNF652Q9Y2D9 606 aa20.83■□□□□ 0.93
BRCA1-228ENST00000618469 ANKRD31Q8N7Z5 1873 aa20.83■□□□□ 0.92
BRCA1-228ENST00000618469 EIF2S2P20042 333 aaKnown RBP20.82■□□□□ 0.92
BRCA1-228ENST00000618469 C2CD5Q86YS7 1000 aa20.82■□□□□ 0.92
BRCA1-228ENST00000618469 MBIPQ9NS73 344 aa20.82■□□□□ 0.92
BRCA1-228ENST00000618469 IFT57Q9NWB7 429 aa20.81■□□□□ 0.92
BRCA1-228ENST00000618469 COL11A2P13942 1736 aaPredicted RBP20.81■□□□□ 0.92
BRCA1-228ENST00000618469 NUP98P52948 1817 aa20.81■□□□□ 0.92
BRCA1-228ENST00000618469 POTECB2RU33 542 aa20.8■□□□□ 0.92
BRCA1-228ENST00000618469 NFKBIEO00221 500 aa20.8■□□□□ 0.92
BRCA1-228ENST00000618469 KIF6Q6ZMV9 814 aa20.8■□□□□ 0.92
BRCA1-228ENST00000618469 CCDC24Q8N4L8 307 aa20.8■□□□□ 0.92
BRCA1-228ENST00000618469 TTLL6Q8N841 843 aa20.8■□□□□ 0.92
BRCA1-228ENST00000618469 NECTIN2Q92692 538 aa20.8■□□□□ 0.92
BRCA1-228ENST00000618469 SETDB2Q96T68 719 aa20.8■□□□□ 0.92
BRCA1-228ENST00000618469 ZNF853P0CG23 659 aa20.79■□□□□ 0.92
BRCA1-228ENST00000618469 GNAI1P63096 354 aa20.79■□□□□ 0.92
BRCA1-228ENST00000618469 CLEC4GQ6UXB4 293 aa20.79■□□□□ 0.92
BRCA1-228ENST00000618469 FAM9BQ8IZU0 186 aa20.79■□□□□ 0.92
BRCA1-228ENST00000618469 MKRN1Q9UHC7 482 aaKnown RBP20.79■□□□□ 0.92
BRCA1-228ENST00000618469 NPHP1O15259 732 aa20.78■□□□□ 0.92
BRCA1-228ENST00000618469 ANXA1P04083 346 aa20.78■□□□□ 0.92
BRCA1-228ENST00000618469 PROSER3Q2NL68 480 aa20.78■□□□□ 0.92
BRCA1-228ENST00000618469 TTLL7Q6ZT98 887 aa20.78■□□□□ 0.92
BRCA1-228ENST00000618469 CNBD1Q8NA66 436 aa20.78■□□□□ 0.92
BRCA1-228ENST00000618469 MAP3K15Q6ZN16 1313 aa20.78■□□□□ 0.92
BRCA1-228ENST00000618469 HLFQ16534 295 aa20.77■□□□□ 0.92
BRCA1-228ENST00000618469 PRR5LQ6MZQ0 368 aa20.77■□□□□ 0.92
BRCA1-228ENST00000618469 ZBTB3Q9H5J0 574 aa20.77■□□□□ 0.92
BRCA1-228ENST00000618469 NIP7Q9Y221 180 aaKnown RBP eCLIP20.77■□□□□ 0.92
BRCA1-228ENST00000618469 RGL2O15211 777 aa20.76■□□□□ 0.91
BRCA1-228ENST00000618469 HOXB7P09629 217 aa20.76■□□□□ 0.91
BRCA1-228ENST00000618469 POTEIP0CG38 1075 aa20.76■□□□□ 0.91
BRCA1-228ENST00000618469 POTEJP0CG39 1038 aa20.76■□□□□ 0.91
BRCA1-228ENST00000618469 PDIA6Q15084 440 aa20.76■□□□□ 0.91
BRCA1-228ENST00000618469 CCDC27Q2M243 656 aa20.76■□□□□ 0.91
BRCA1-228ENST00000618469 HDGFL1Q5TGJ6 251 aa20.76■□□□□ 0.91
BRCA1-228ENST00000618469 ZNF622Q969S3 477 aaKnown RBP eCLIP20.76■□□□□ 0.91
BRCA1-228ENST00000618469 ZC3H4Q9UPT8 1303 aaKnown RBP20.76■□□□□ 0.91
BRCA1-228ENST00000618469 ANKRD36CQ5JPF3 1778 aa20.75■□□□□ 0.91
BRCA1-228ENST00000618469 H0YIN7 160 aa20.75■□□□□ 0.91
BRCA1-228ENST00000618469 C21orf2O43822 256 aa20.75■□□□□ 0.91
BRCA1-228ENST00000618469 LRP10Q7Z4F1 713 aa20.75■□□□□ 0.91
BRCA1-228ENST00000618469 ERVV-1B6SEH8 477 aa20.74■□□□□ 0.91
BRCA1-228ENST00000618469 ST5P78524 1137 aa20.74■□□□□ 0.91
BRCA1-228ENST00000618469 CACNA1SQ13698 1873 aa20.74■□□□□ 0.91
BRCA1-228ENST00000618469 DUSP27Q5VZP5 1158 aa20.74■□□□□ 0.91
BRCA1-228ENST00000618469 NBPF5PQ86XG9 351 aaPredicted RBP20.74■□□□□ 0.91
BRCA1-228ENST00000618469 WWC1Q8IX03 1113 aa20.74■□□□□ 0.91
BRCA1-228ENST00000618469 CHPF2Q9P2E5 772 aa20.74■□□□□ 0.91
BRCA1-228ENST00000618469 SALL2Q9Y467 1007 aaPredicted RBP20.73■□□□□ 0.91
BRCA1-228ENST00000618469 FAM177BA6PVY3 158 aa20.72■□□□□ 0.91
BRCA1-228ENST00000618469 ERFEQ4G0M1 354 aa20.72■□□□□ 0.91
BRCA1-228ENST00000618469 DPY19L2Q6NUT2 758 aa20.72■□□□□ 0.91
BRCA1-228ENST00000618469 TSR2Q969E8 191 aaKnown RBP20.72■□□□□ 0.91
BRCA1-228ENST00000618469 DDX21Q9NR30 783 aaKnown RBP eCLIP20.72■□□□□ 0.91
BRCA1-228ENST00000618469 DICER1Q9UPY3 1922 aaKnown RBP20.72■□□□□ 0.91
BRCA1-228ENST00000618469 XAGE3Q8WTP9 111 aa20.71■□□□□ 0.91
BRCA1-228ENST00000618469 BRIP1Q9BX63 1249 aa20.71■□□□□ 0.91
BRCA1-228ENST00000618469 ELL2O00472 640 aaPredicted RBP20.7■□□□□ 0.9
BRCA1-228ENST00000618469 FOXN1O15353 648 aa20.7■□□□□ 0.9
BRCA1-228ENST00000618469 DDNO94850 711 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms