RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 NSD3Q9BZ95 1437 aa10.19□□□□□ -0.78
SCAMP1-206ENST00000618166 C4AP0C0L4 1744 aa10.18□□□□□ -0.78
SCAMP1-206ENST00000618166 LMNB1P20700 586 aa10.18□□□□□ -0.78
SCAMP1-206ENST00000618166 DEFB115Q30KQ5 88 aa10.18□□□□□ -0.78
SCAMP1-206ENST00000618166 KDM2AQ9Y2K7 1162 aa10.18□□□□□ -0.78
SCAMP1-206ENST00000618166 MEGF6O75095 1541 aa10.18□□□□□ -0.78
SCAMP1-206ENST00000618166 ITGBL1O95965 494 aaPredicted RBP10.17□□□□□ -0.78
SCAMP1-206ENST00000618166 WNT2BQ93097 391 aa10.17□□□□□ -0.78
SCAMP1-206ENST00000618166 LTV1Q96GA3 475 aaPredicted RBP10.17□□□□□ -0.78
SCAMP1-206ENST00000618166 ECM2O94769 699 aaPredicted RBP10.16□□□□□ -0.78
SCAMP1-206ENST00000618166 GRM1Q13255 1194 aa10.16□□□□□ -0.78
SCAMP1-206ENST00000618166 MPRIPQ6WCQ1 1025 aa10.16□□□□□ -0.78
SCAMP1-206ENST00000618166 ZCRB1Q8TBF4 217 aaKnown RBP10.16□□□□□ -0.78
SCAMP1-206ENST00000618166 A0A0C4DFX4 3053 aa10.16□□□□□ -0.78
SCAMP1-206ENST00000618166 THSD7BQ9C0I4 1608 aa10.16□□□□□ -0.78
SCAMP1-206ENST00000618166 GOLGA8CPA6NN73 597 aa10.15□□□□□ -0.78
SCAMP1-206ENST00000618166 TMF1P82094 1093 aa10.15□□□□□ -0.78
SCAMP1-206ENST00000618166 ITPK1Q13572 414 aa10.15□□□□□ -0.78
SCAMP1-206ENST00000618166 ZNF454Q8N9F8 522 aa10.15□□□□□ -0.78
SCAMP1-206ENST00000618166 NFKBIEO00221 500 aa10.14□□□□□ -0.79
SCAMP1-206ENST00000618166 OXER1Q8TDS5 423 aa10.14□□□□□ -0.79
SCAMP1-206ENST00000618166 MPHOSPH9Q99550 1183 aa10.14□□□□□ -0.79
SCAMP1-206ENST00000618166 ZBED2Q9BTP6 218 aa10.14□□□□□ -0.79
SCAMP1-206ENST00000618166 PARP3Q9Y6F1 533 aa10.14□□□□□ -0.79
SCAMP1-206ENST00000618166 FAM208AQ9UK61 1670 aaKnown RBP10.14□□□□□ -0.79
SCAMP1-206ENST00000618166 DDNO94850 711 aaPredicted RBP10.14□□□□□ -0.79
SCAMP1-206ENST00000618166 GYS1P13807 737 aa10.14□□□□□ -0.79
SCAMP1-206ENST00000618166 PPARGC1BQ86YN6 1023 aaKnown RBP10.14□□□□□ -0.79
SCAMP1-206ENST00000618166 NLGN1Q8N2Q7 840 aa10.14□□□□□ -0.79
SCAMP1-206ENST00000618166 MRPL50Q8N5N7 158 aaKnown RBP10.14□□□□□ -0.79
SCAMP1-206ENST00000618166 BEGAINQ9BUH8 593 aa10.14□□□□□ -0.79
SCAMP1-206ENST00000618166 ABT1Q9ULW3 272 aaKnown RBP10.14□□□□□ -0.79
SCAMP1-206ENST00000618166 SZT2Q5T011 3432 aa10.13□□□□□ -0.79
SCAMP1-206ENST00000618166 LTN1O94822 1766 aa10.13□□□□□ -0.79
SCAMP1-206ENST00000618166 AOC2O75106 756 aa10.13□□□□□ -0.79
SCAMP1-206ENST00000618166 FXR1P51114 621 aaKnown RBP eCLIP10.13□□□□□ -0.79
SCAMP1-206ENST00000618166 CYP4F22Q6NT55 531 aa10.13□□□□□ -0.79
SCAMP1-206ENST00000618166 PAXIP1Q6ZW49 1069 aaPredicted RBP10.13□□□□□ -0.79
SCAMP1-206ENST00000618166 CAPNS2Q96L46 248 aa10.13□□□□□ -0.79
SCAMP1-206ENST00000618166 PTPREP23469 700 aa10.12□□□□□ -0.79
SCAMP1-206ENST00000618166 DDR1Q08345 913 aa10.12□□□□□ -0.79
SCAMP1-206ENST00000618166 LDHDQ86WU2 507 aa10.12□□□□□ -0.79
SCAMP1-206ENST00000618166 GPR101Q96P66 508 aaPredicted RBP10.12□□□□□ -0.79
SCAMP1-206ENST00000618166 MAP2P11137 1827 aaKnown RBP10.11□□□□□ -0.79
SCAMP1-206ENST00000618166 CASP8AP2Q9UKL3 1982 aa10.11□□□□□ -0.79
SCAMP1-206ENST00000618166 LOC102724428A0A0B4J2F2 783 aa10.11□□□□□ -0.79
SCAMP1-206ENST00000618166 RGL2O15211 777 aa10.11□□□□□ -0.79
SCAMP1-206ENST00000618166 FOSBP53539 338 aa10.11□□□□□ -0.79
SCAMP1-206ENST00000618166 SIK1P57059 783 aa10.11□□□□□ -0.79
SCAMP1-206ENST00000618166 FMR1Q06787 632 aaKnown RBP eCLIP10.11□□□□□ -0.79
SCAMP1-206ENST00000618166 Q6ZNB5 142 aa10.11□□□□□ -0.79
SCAMP1-206ENST00000618166 DCAF11Q8TEB1 546 aa10.11□□□□□ -0.79
SCAMP1-206ENST00000618166 ARHGEF1Q92888 912 aaKnown RBP10.11□□□□□ -0.79
SCAMP1-206ENST00000618166 GCC1Q96CN9 775 aa10.11□□□□□ -0.79
SCAMP1-206ENST00000618166 TTC21AQ8NDW8 1320 aa10.1□□□□□ -0.79
SCAMP1-206ENST00000618166 EAPPQ56P03 285 aaPredicted RBP10.1□□□□□ -0.79
SCAMP1-206ENST00000618166 TRAPPC3LQ5T215 181 aa10.1□□□□□ -0.79
SCAMP1-206ENST00000618166 MAP1SQ66K74 1059 aaPredicted RBP10.1□□□□□ -0.79
SCAMP1-206ENST00000618166 PIGBQ92521 554 aa10.1□□□□□ -0.79
SCAMP1-206ENST00000618166 NBPF1Q3BBV0 1214 aa10.09□□□□□ -0.79
SCAMP1-206ENST00000618166 ERFEQ4G0M1 354 aa10.09□□□□□ -0.79
SCAMP1-206ENST00000618166 NME9Q86XW9 330 aa10.09□□□□□ -0.79
SCAMP1-206ENST00000618166 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.09□□□□□ -0.791e-6■■■■□ 19.6
SCAMP1-206ENST00000618166 USHBP1Q8N6Y0 703 aa10.09□□□□□ -0.79
SCAMP1-206ENST00000618166 SMARCC1Q92922 1105 aaPredicted RBP10.09□□□□□ -0.79
SCAMP1-206ENST00000618166 TAF1DQ9H5J8 278 aaPredicted RBP10.09□□□□□ -0.79
SCAMP1-206ENST00000618166 MKI67P46013 3256 aaKnown RBP10.09□□□□□ -0.79
SCAMP1-206ENST00000618166 CCDC88AQ3V6T2 1871 aa10.08□□□□□ -0.8
SCAMP1-206ENST00000618166 HMGB2P26583 209 aaKnown RBP10.08□□□□□ -0.8
SCAMP1-206ENST00000618166 ATP6V1AP38606 617 aa10.08□□□□□ -0.8
SCAMP1-206ENST00000618166 NBPF3Q9H094 633 aa10.08□□□□□ -0.8
SCAMP1-206ENST00000618166 RGPD2P0DJD1 1756 aa10.07□□□□□ -0.8
SCAMP1-206ENST00000618166 SRP68Q9UHB9 627 aaKnown RBP10.07□□□□□ -0.8
SCAMP1-206ENST00000618166 RTCBQ9Y3I0 505 aaKnown RBP10.07□□□□□ -0.8
SCAMP1-206ENST00000618166 ADAMTSL1Q8N6G6 1762 aa10.06□□□□□ -0.8
SCAMP1-206ENST00000618166 CNTROBQ8N137 903 aa10.06□□□□□ -0.8
SCAMP1-206ENST00000618166 NBPF15Q8N660 670 aa10.06□□□□□ -0.8
SCAMP1-206ENST00000618166 IP6K1Q92551 441 aa10.06□□□□□ -0.8
SCAMP1-206ENST00000618166 ASAP1Q9ULH1 1129 aa10.06□□□□□ -0.8
SCAMP1-206ENST00000618166 USP31Q70CQ4 1352 aa10.06□□□□□ -0.8
SCAMP1-206ENST00000618166 CYP27B1O15528 508 aa10.05□□□□□ -0.8
SCAMP1-206ENST00000618166 SLC17A8Q8NDX2 589 aa10.05□□□□□ -0.8
SCAMP1-206ENST00000618166 KTN1Q86UP2 1357 aaKnown RBP10.05□□□□□ -0.8
SCAMP1-206ENST00000618166 ADAMTS7Q9UKP4 1686 aa10.05□□□□□ -0.8
SCAMP1-206ENST00000618166 ITGB4P16144 1822 aa10.05□□□□□ -0.8
SCAMP1-206ENST00000618166 CENPJQ9HC77 1338 aaPredicted RBP10.05□□□□□ -0.8
SCAMP1-206ENST00000618166 COL6A3P12111 3177 aa10.05□□□□□ -0.8
SCAMP1-206ENST00000618166 RFC4P35249 363 aa10.04□□□□□ -0.8
SCAMP1-206ENST00000618166 ECE1P42892 770 aa10.04□□□□□ -0.8
SCAMP1-206ENST00000618166 SLC4A9Q96Q91 983 aa10.04□□□□□ -0.8
SCAMP1-206ENST00000618166 DDX21Q9NR30 783 aaKnown RBP eCLIP10.04□□□□□ -0.8
SCAMP1-206ENST00000618166 IQCA1LA6NCM1 817 aa10.03□□□□□ -0.8
SCAMP1-206ENST00000618166 POLRMTO00411 1230 aaKnown RBP10.03□□□□□ -0.8
SCAMP1-206ENST00000618166 FBLN1P23142 703 aa10.03□□□□□ -0.8
SCAMP1-206ENST00000618166 NBPF6Q5VWK0 638 aa10.03□□□□□ -0.8
SCAMP1-206ENST00000618166 NBPF4Q96M43 638 aa10.03□□□□□ -0.8
SCAMP1-206ENST00000618166 PCDH11XQ9BZA7 1347 aa10.03□□□□□ -0.8
SCAMP1-206ENST00000618166 PCDH11YQ9BZA8 1340 aa10.03□□□□□ -0.8
SCAMP1-206ENST00000618166 TTLL6Q8N841 843 aa10.02□□□□□ -0.8
SCAMP1-206ENST00000618166 CUL9Q8IWT3 2517 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms